RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 ST20-AS1Q8NBB2 130 aa4.36□□□□□ -1.71
LINC01049-201ENST00000426840 DHRS4-AS1Q9P1J3 65 aa4.36□□□□□ -1.71
LINC01049-201ENST00000426840 ZNF706Q9Y5V0 76 aaPredicted RBP4.36□□□□□ -1.71
LINC01049-201ENST00000426840 LINC00483Q53H64 154 aa4.35□□□□□ -1.71
LINC01049-201ENST00000426840 BVES-AS1Q5T3Y7 98 aa4.35□□□□□ -1.71
LINC01049-201ENST00000426840 GAGE2AQ6NT46 116 aa4.35□□□□□ -1.71
LINC01049-201ENST00000426840 RAB37Q96AX2 223 aa4.35□□□□□ -1.71
LINC01049-201ENST00000426840 PRO1854Q9UHT4 67 aa4.35□□□□□ -1.71
LINC01049-201ENST00000426840 SPRR1BP22528 89 aa4.34□□□□□ -1.71
LINC01049-201ENST00000426840 CTAG1AP78358 180 aa4.34□□□□□ -1.71
LINC01049-201ENST00000426840 VAMP3Q15836 100 aa4.34□□□□□ -1.71
LINC01049-201ENST00000426840 C3orf22Q8N5N4 141 aa4.34□□□□□ -1.71
LINC01049-201ENST00000426840 TYMSOSQ8TAI1 123 aa4.34□□□□□ -1.71
LINC01049-201ENST00000426840 H7C2G1 150 aa4.33□□□□□ -1.72
LINC01049-201ENST00000426840 LINC01547P58512 204 aaPredicted RBP4.33□□□□□ -1.72
LINC01049-201ENST00000426840 LINC00575Q6W349 94 aa4.33□□□□□ -1.72
LINC01049-201ENST00000426840 NHP2Q9NX24 153 aaKnown RBP4.33□□□□□ -1.72
LINC01049-201ENST00000426840 KRTAP9-8Q9BYQ0 159 aa4.32□□□□□ -1.72
LINC01049-201ENST00000426840 IGLV5-48A0A075B6I7 105 aa4.31□□□□□ -1.72
LINC01049-201ENST00000426840 hADV29S1A0JD25 119 aa4.31□□□□□ -1.72
LINC01049-201ENST00000426840 TSTD3H0UI37 97 aa4.31□□□□□ -1.72
LINC01049-201ENST00000426840 H0YGX0 51 aa4.31□□□□□ -1.72
LINC01049-201ENST00000426840 K7ERJ3 54 aa4.31□□□□□ -1.72
LINC01049-201ENST00000426840 DEFB105AQ8NG35 78 aa4.31□□□□□ -1.72
LINC01049-201ENST00000426840 TEX49A0A1B0GTD5 131 aa4.3□□□□□ -1.72
LINC01049-201ENST00000426840 SLC25A20O43772 301 aa4.3□□□□□ -1.72
LINC01049-201ENST00000426840 SSBP3-AS1Q7Z2R9 100 aa4.3□□□□□ -1.72
LINC01049-201ENST00000426840 SMIM29Q86T20 159 aa4.3□□□□□ -1.72
LINC01049-201ENST00000426840 Q8N377 158 aa4.3□□□□□ -1.72
LINC01049-201ENST00000426840 IGLV9-49A0A0B4J1Y8 123 aa4.29□□□□□ -1.72
LINC01049-201ENST00000426840 TSPAN13O95857 204 aa4.29□□□□□ -1.72
LINC01049-201ENST00000426840 Q1RN00 199 aa4.29□□□□□ -1.72
LINC01049-201ENST00000426840 FAM218AQ96MZ4 157 aa4.29□□□□□ -1.72
LINC01049-201ENST00000426840 HMCN2Q8NDA2 5059 aa4.29□□□□□ -1.72
LINC01049-201ENST00000426840 M0R143 59 aa4.28□□□□□ -1.72
LINC01049-201ENST00000426840 MOBPQ13875 183 aa4.28□□□□□ -1.72
LINC01049-201ENST00000426840 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.28□□□□□ -1.72
LINC01049-201ENST00000426840 Q6ZQY7 126 aa4.28□□□□□ -1.72
LINC01049-201ENST00000426840 LINC00304Q8N9R0 145 aa4.28□□□□□ -1.72
LINC01049-201ENST00000426840 Q8NBF4 154 aa4.28□□□□□ -1.72
LINC01049-201ENST00000426840 A0A1B0GX51 115 aa4.27□□□□□ -1.73
LINC01049-201ENST00000426840 LAMTOR3Q9UHA4 124 aa4.27□□□□□ -1.73
LINC01049-201ENST00000426840 PSMB2P49721 201 aa4.26□□□□□ -1.73
LINC01049-201ENST00000426840 SPAG11AQ6PDA7 123 aa4.26□□□□□ -1.73
LINC01049-201ENST00000426840 CLEC2BQ92478 149 aa4.26□□□□□ -1.73
LINC01049-201ENST00000426840 COX6CP09669 75 aa4.25□□□□□ -1.73
LINC01049-201ENST00000426840 LCE1AQ5T7P2 110 aa4.25□□□□□ -1.73
LINC01049-201ENST00000426840 C9orf153Q5TBE3 101 aa4.25□□□□□ -1.73
LINC01049-201ENST00000426840 SNCGO76070 127 aa4.24□□□□□ -1.73
LINC01049-201ENST00000426840 OCIAD2Q56VL3 154 aa4.24□□□□□ -1.73
LINC01049-201ENST00000426840 PPDPFLQ8WWR9 84 aa4.24□□□□□ -1.73
LINC01049-201ENST00000426840 IGLV8-61A0A075B6I0 122 aa4.23□□□□□ -1.73
LINC01049-201ENST00000426840 A0A0G2JQZ4 141 aa4.23□□□□□ -1.73
LINC01049-201ENST00000426840 SPINK1P00995 79 aa4.23□□□□□ -1.73
LINC01049-201ENST00000426840 SCGB1C2P0DMR2 95 aa4.23□□□□□ -1.73
LINC01049-201ENST00000426840 BATFQ16520 125 aa4.23□□□□□ -1.73
LINC01049-201ENST00000426840 MPLKIPQ8TAP9 179 aa4.23□□□□□ -1.73
LINC01049-201ENST00000426840 NAA38Q9BRA0 125 aaKnown RBP4.23□□□□□ -1.73
LINC01049-201ENST00000426840 SNHG12Q9BXW3 62 aa4.23□□□□□ -1.73
LINC01049-201ENST00000426840 LST1O00453 97 aa4.22□□□□□ -1.73
LINC01049-201ENST00000426840 TAX1BP3O14907 124 aa4.21□□□□□ -1.74
LINC01049-201ENST00000426840 TRACP01848 142 aa4.21□□□□□ -1.74
LINC01049-201ENST00000426840 NDUFV3P56181 108 aaKnown RBP4.21□□□□□ -1.74
LINC01049-201ENST00000426840 RPS29P62273 56 aaKnown RBP4.21□□□□□ -1.74
LINC01049-201ENST00000426840 F8WEM9 126 aa4.2□□□□□ -1.74
LINC01049-201ENST00000426840 TCL1BO95988 128 aa4.2□□□□□ -1.74
LINC01049-201ENST00000426840 CD164Q04900 197 aa4.2□□□□□ -1.74
LINC01049-201ENST00000426840 HRCT1Q6UXD1 115 aa4.2□□□□□ -1.74
LINC01049-201ENST00000426840 RETNLBQ9BQ08 111 aa4.2□□□□□ -1.74
LINC01049-201ENST00000426840 IGKV2D-30A0A075B6S6 120 aa4.19□□□□□ -1.74
LINC01049-201ENST00000426840 H3BQ85 93 aa4.19□□□□□ -1.74
LINC01049-201ENST00000426840 H3BUT2 72 aa4.19□□□□□ -1.74
LINC01049-201ENST00000426840 DNAL4O96015 105 aa4.19□□□□□ -1.74
LINC01049-201ENST00000426840 FABP2P12104 132 aa4.19□□□□□ -1.74
LINC01049-201ENST00000426840 PRR4Q16378 134 aa4.19□□□□□ -1.74
LINC01049-201ENST00000426840 Q6JHZ5 121 aa4.19□□□□□ -1.74
LINC01049-201ENST00000426840 IGFL1Q6UW32 110 aa4.19□□□□□ -1.74
LINC01049-201ENST00000426840 ORMDL1Q9P0S3 153 aa4.19□□□□□ -1.74
LINC01049-201ENST00000426840 TMEM256-PLSCR3K7ERE1 68 aa4.18□□□□□ -1.74
LINC01049-201ENST00000426840 LPAP08519 4548 aa4.17□□□□□ -1.74
LINC01049-201ENST00000426840 PCP4L1A6NKN8 68 aa4.17□□□□□ -1.74
LINC01049-201ENST00000426840 H3BMG7 143 aa4.17□□□□□ -1.74
LINC01049-201ENST00000426840 BAALC-AS2P0C853 105 aa4.17□□□□□ -1.74
LINC01049-201ENST00000426840 UBE2V1Q13404 147 aa4.17□□□□□ -1.74
LINC01049-201ENST00000426840 ATXN8Q156A1 80 aa4.17□□□□□ -1.74
LINC01049-201ENST00000426840 Q5XG85 94 aa4.17□□□□□ -1.74
LINC01049-201ENST00000426840 LRP2P98164 4655 aa4.17□□□□□ -1.74
LINC01049-201ENST00000426840 IGLV7-46A0A075B6I9 117 aa4.16□□□□□ -1.74
LINC01049-201ENST00000426840 TRBV20-1A0A075B6N2 111 aa4.16□□□□□ -1.74
LINC01049-201ENST00000426840 A0A1W2PPM0 123 aa4.16□□□□□ -1.74
LINC01049-201ENST00000426840 COL5A1-AS1Q5SY13 56 aa4.15□□□□□ -1.75
LINC01049-201ENST00000426840 LYRM7Q5U5X0 104 aa4.15□□□□□ -1.75
LINC01049-201ENST00000426840 Q6Q795 121 aa4.15□□□□□ -1.75
LINC01049-201ENST00000426840 FP248Q71RG6 208 aaPredicted RBP4.15□□□□□ -1.75
LINC01049-201ENST00000426840 LIMD2Q9BT23 127 aa4.15□□□□□ -1.75
LINC01049-201ENST00000426840 TRBV7-7A0A0K0K1E9 115 aa4.14□□□□□ -1.75
LINC01049-201ENST00000426840 A0A1W2PNM2 257 aa4.13□□□□□ -1.75
LINC01049-201ENST00000426840 C1orf195Q5TG92 126 aa4.13□□□□□ -1.75
LINC01049-201ENST00000426840 TEN1Q86WV5 123 aa4.13□□□□□ -1.75
LINC01049-201ENST00000426840 ANKRD29Q8N6D5 301 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms