RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 COA5Q86WW8 74 aa8.56□□□□□ -1.04
RPL28-202ENST00000426763 RPS28P62857 69 aaKnown RBP8.56□□□□□ -1.04
RPL28-202ENST00000426763 C1orf195Q5TG92 126 aa8.55□□□□□ -1.04
RPL28-202ENST00000426763 LINC01600Q96MT4 127 aa8.55□□□□□ -1.04
RPL28-202ENST00000426763 KLKP1Q107X0 134 aa8.53□□□□□ -1.04
RPL28-202ENST00000426763 UBR5O95071 2799 aaPredicted RBP8.53□□□□□ -1.04
RPL28-202ENST00000426763 KRTAP10-1P60331 282 aa8.52□□□□□ -1.04
RPL28-202ENST00000426763 ITPR2Q14571 2701 aa8.52□□□□□ -1.04
RPL28-202ENST00000426763 KRTAP10-2P60368 255 aa8.52□□□□□ -1.05
RPL28-202ENST00000426763 LAMA1P25391 3075 aa8.51□□□□□ -1.05
RPL28-202ENST00000426763 FRYQ5TBA9 3013 aa8.51□□□□□ -1.05
RPL28-202ENST00000426763 IGLV8-61A0A075B6I0 122 aa8.51□□□□□ -1.05
RPL28-202ENST00000426763 Q6ZR54 194 aa8.51□□□□□ -1.05
RPL28-202ENST00000426763 KRTAP21-3Q3LHN1 58 aa8.51□□□□□ -1.05
RPL28-202ENST00000426763 SPRR1BP22528 89 aa8.5□□□□□ -1.05
RPL28-202ENST00000426763 COL6A3P12111 3177 aa8.49□□□□□ -1.05
RPL28-202ENST00000426763 Q5VSD8 79 aa8.48□□□□□ -1.05
RPL28-202ENST00000426763 FRYLO94915 3013 aa8.48□□□□□ -1.05
RPL28-202ENST00000426763 Q6ZSA8 131 aa8.48□□□□□ -1.05
RPL28-202ENST00000426763 ATMQ13315 3056 aa8.47□□□□□ -1.05
RPL28-202ENST00000426763 ITPR1Q14643 2758 aa8.47□□□□□ -1.05
RPL28-202ENST00000426763 DMXL2Q8TDJ6 3036 aa8.44□□□□□ -1.06
RPL28-202ENST00000426763 VCANP13611 3396 aa8.43□□□□□ -1.06
RPL28-202ENST00000426763 COL12A1Q99715 3063 aa8.42□□□□□ -1.06
RPL28-202ENST00000426763 Q8N1X5 172 aa8.42□□□□□ -1.06
RPL28-202ENST00000426763 CELSR3Q9NYQ7 3312 aa8.41□□□□□ -1.06
RPL28-202ENST00000426763 SPANXA2-OT1Q8N9U9 137 aa8.4□□□□□ -1.06
RPL28-202ENST00000426763 H7BZZ5 65 aa8.4□□□□□ -1.07
RPL28-202ENST00000426763 HIVEP1P15822 2718 aa8.39□□□□□ -1.07
RPL28-202ENST00000426763 UQCR11O14957 56 aa8.39□□□□□ -1.07
RPL28-202ENST00000426763 NBEAL2Q6ZNJ1 2754 aa8.38□□□□□ -1.07
RPL28-202ENST00000426763 C4orf26Q17RF5 130 aa8.38□□□□□ -1.07
RPL28-202ENST00000426763 NBEAL1Q6ZS30 2694 aa8.38□□□□□ -1.07
RPL28-202ENST00000426763 NSD1Q96L73 2696 aaPredicted RBP8.38□□□□□ -1.07
RPL28-202ENST00000426763 UTP20O75691 2785 aaKnown RBP8.38□□□□□ -1.07
RPL28-202ENST00000426763 OCR1Q9BZK8 76 aa8.38□□□□□ -1.07
RPL28-202ENST00000426763 CYP4F30PQ9H0H9 118 aa8.37□□□□□ -1.07
RPL28-202ENST00000426763 KMT2BQ9UMN6 2715 aaPredicted RBP8.37□□□□□ -1.07
RPL28-202ENST00000426763 PANO1I0J062 215 aa8.36□□□□□ -1.07
RPL28-202ENST00000426763 A8MUN3 132 aa8.36□□□□□ -1.07
RPL28-202ENST00000426763 MMP24-AS1A0A0U1RRL7 71 aa8.35□□□□□ -1.07
RPL28-202ENST00000426763 PRO0628Q9UI54 55 aa8.35□□□□□ -1.07
RPL28-202ENST00000426763 EYSQ5T1H1 3165 aa8.34□□□□□ -1.07
RPL28-202ENST00000426763 BOD1L1Q8NFC6 3051 aa8.34□□□□□ -1.07
RPL28-202ENST00000426763 LINC00483Q53H64 154 aa8.34□□□□□ -1.07
RPL28-202ENST00000426763 ZCCHC13Q8WW36 166 aaKnown RBP8.33□□□□□ -1.08
RPL28-202ENST00000426763 LINC00472Q9H8W2 130 aa8.33□□□□□ -1.08
RPL28-202ENST00000426763 DNAH14Q0VDD8 3507 aa8.32□□□□□ -1.08
RPL28-202ENST00000426763 TACC2O95359 2948 aa8.32□□□□□ -1.08
RPL28-202ENST00000426763 Q6ZRN7 208 aaPredicted RBP8.32□□□□□ -1.08
RPL28-202ENST00000426763 SPTBN5Q9NRC6 3674 aaKnown RBP8.31□□□□□ -1.08
RPL28-202ENST00000426763 APCP25054 2843 aa8.31□□□□□ -1.08
RPL28-202ENST00000426763 ADGRG4Q8IZF6 3080 aa8.3□□□□□ -1.08
RPL28-202ENST00000426763 KRTAP4-16G5E9R7 235 aaPredicted RBP8.3□□□□□ -1.08
RPL28-202ENST00000426763 MIR22HGQ0VDD5 57 aa8.28□□□□□ -1.08
RPL28-202ENST00000426763 LRBAP50851 2863 aa8.27□□□□□ -1.09
RPL28-202ENST00000426763 HRES1P13985 223 aa8.26□□□□□ -1.09
RPL28-202ENST00000426763 SEC61BP60468 96 aaKnown RBP8.26□□□□□ -1.09
RPL28-202ENST00000426763 DMXL1Q9Y485 3027 aa8.24□□□□□ -1.09
RPL28-202ENST00000426763 M0R2T5 61 aa8.23□□□□□ -1.09
RPL28-202ENST00000426763 KALRNO60229 2985 aa8.23□□□□□ -1.09
RPL28-202ENST00000426763 NBEAQ8NFP9 2946 aa8.22□□□□□ -1.09
RPL28-202ENST00000426763 LINC01554Q52M75 96 aa8.22□□□□□ -1.09
RPL28-202ENST00000426763 FP248Q71RG6 208 aaPredicted RBP8.21□□□□□ -1.09
RPL28-202ENST00000426763 Q5W150 140 aa8.19□□□□□ -1.1
RPL28-202ENST00000426763 Q8N9P0 234 aaPredicted RBP8.19□□□□□ -1.1
RPL28-202ENST00000426763 FREM2Q5SZK8 3169 aa8.19□□□□□ -1.1
RPL28-202ENST00000426763 SPINK7P58062 85 aa8.18□□□□□ -1.1
RPL28-202ENST00000426763 ZZEF1O43149 2961 aa8.17□□□□□ -1.1
RPL28-202ENST00000426763 A0A087X002 238 aa8.17□□□□□ -1.1
RPL28-202ENST00000426763 REV3LO60673 3130 aa8.17□□□□□ -1.1
RPL28-202ENST00000426763 OXTP01178 125 aa8.17□□□□□ -1.1
RPL28-202ENST00000426763 A0A0D9SG42 100 aa8.15□□□□□ -1.1
RPL28-202ENST00000426763 SPINT4Q6UDR6 99 aa8.15□□□□□ -1.11
RPL28-202ENST00000426763 CSAG1Q6PB30 78 aa8.14□□□□□ -1.11
RPL28-202ENST00000426763 CRIPTQ9P021 101 aa8.14□□□□□ -1.11
RPL28-202ENST00000426763 USP34Q70CQ2 3546 aa8.14□□□□□ -1.11
RPL28-202ENST00000426763 STAB2Q8WWQ8 2551 aa8.14□□□□□ -1.11
RPL28-202ENST00000426763 KRTAP11-1Q8IUC1 163 aa8.13□□□□□ -1.11
RPL28-202ENST00000426763 S4R3F8 94 aa8.13□□□□□ -1.11
RPL28-202ENST00000426763 TENM4Q6N022 2769 aa8.11□□□□□ -1.11
RPL28-202ENST00000426763 KRTAP7-1Q8IUC3 87 aa8.1□□□□□ -1.11
RPL28-202ENST00000426763 NIPBLQ6KC79 2804 aaeCLIP8.09□□□□□ -1.11
RPL28-202ENST00000426763 RPS29P62273 56 aaKnown RBP8.07□□□□□ -1.12
RPL28-202ENST00000426763 A0A1B0GU33 70 aa8.05□□□□□ -1.12
RPL28-202ENST00000426763 HRNRQ86YZ3 2850 aaPredicted RBP8.04□□□□□ -1.12
RPL28-202ENST00000426763 CDC42SE1Q9NRR8 79 aa8.04□□□□□ -1.12
RPL28-202ENST00000426763 ZANQ9Y493 2812 aa8.04□□□□□ -1.12
RPL28-202ENST00000426763 ASB16-AS1Q495Z4 193 aa8.03□□□□□ -1.12
RPL28-202ENST00000426763 Q1T7F1 81 aa8.03□□□□□ -1.12
RPL28-202ENST00000426763 KRTAP13-1Q8IUC0 172 aa8.02□□□□□ -1.13
RPL28-202ENST00000426763 CRYBG3Q68DQ2 2970 aa8.01□□□□□ -1.13
RPL28-202ENST00000426763 CAMK2N1Q7Z7J9 78 aa7.99□□□□□ -1.13
RPL28-202ENST00000426763 KRTAP29-1A8MX34 341 aaPredicted RBP7.97□□□□□ -1.13
RPL28-202ENST00000426763 KRTAP13-2Q52LG2 175 aa7.97□□□□□ -1.13
RPL28-202ENST00000426763 LINC01558Q9Y6Z2 57 aa7.96□□□□□ -1.14
RPL28-202ENST00000426763 CFAP47Q6ZTR5 3102 aa7.96□□□□□ -1.14
RPL28-202ENST00000426763 CELSR2Q9HCU4 2923 aa7.95□□□□□ -1.14
RPL28-202ENST00000426763 SPEGQ15772 3267 aa7.93□□□□□ -1.14
RPL28-202ENST00000426763 Q5XG85 94 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms