RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 PIEZO2Q9H5I5 2752 aa1.14□□□□□ -2.23
SF3B1-205ENST00000424674 PRLHP81277 87 aa1.13□□□□□ -2.23
SF3B1-205ENST00000424674 PLCE1Q9P212 2302 aa1.12□□□□□ -2.23
SF3B1-205ENST00000424674 POLR2KP53803 58 aaKnown RBP1.11□□□□□ -2.23
SF3B1-205ENST00000424674 KRTAP4-1Q9BYQ7 146 aa1.11□□□□□ -2.23
SF3B1-205ENST00000424674 NOP10Q9NPE3 64 aaKnown RBP1.11□□□□□ -2.23
SF3B1-205ENST00000424674 MMP24-AS1A0A0U1RRL7 71 aa1.1□□□□□ -2.23
SF3B1-205ENST00000424674 DEFB106AQ8N104 65 aa1.1□□□□□ -2.23
SF3B1-205ENST00000424674 WNK2Q9Y3S1 2297 aa1.09□□□□□ -2.23
SF3B1-205ENST00000424674 SPINK6Q6UWN8 80 aa1.07□□□□□ -2.24
SF3B1-205ENST00000424674 C2CD3Q4AC94 2353 aa1.07□□□□□ -2.24
SF3B1-205ENST00000424674 MEGF8Q7Z7M0 2845 aa1.06□□□□□ -2.24
SF3B1-205ENST00000424674 RPL39P62891 51 aaKnown RBP1.05□□□□□ -2.24
SF3B1-205ENST00000424674 CACNA1AO00555 2505 aa1.04□□□□□ -2.24
SF3B1-205ENST00000424674 H0YGG7 62 aa1.04□□□□□ -2.24
SF3B1-205ENST00000424674 ARHGAP5-AS1Q96IT6 56 aa1.04□□□□□ -2.24
SF3B1-205ENST00000424674 PKD1L2Q7Z442 2459 aa1.04□□□□□ -2.24
SF3B1-205ENST00000424674 ZNF462Q96JM2 2506 aa1.03□□□□□ -2.24
SF3B1-205ENST00000424674 PKDREJQ9NTG1 2253 aa1.03□□□□□ -2.25
SF3B1-205ENST00000424674 SPTBN2O15020 2390 aa1.01□□□□□ -2.25
SF3B1-205ENST00000424674 A8MTW9 85 aa1.01□□□□□ -2.25
SF3B1-205ENST00000424674 SPINK1P00995 79 aa1.01□□□□□ -2.25
SF3B1-205ENST00000424674 DEFB135Q30KP9 77 aa1.01□□□□□ -2.25
SF3B1-205ENST00000424674 RPL39LQ96EH5 51 aaKnown RBP1.01□□□□□ -2.25
SF3B1-205ENST00000424674 SMR3AQ99954 134 aa1□□□□□ -2.25
SF3B1-205ENST00000424674 MUC6Q6W4X9 2439 aa0.99□□□□□ -2.25
SF3B1-205ENST00000424674 CACNA1HO95180 2353 aa0.99□□□□□ -2.25
SF3B1-205ENST00000424674 M0QY20 66 aa0.99□□□□□ -2.25
SF3B1-205ENST00000424674 M0R2T5 61 aa0.99□□□□□ -2.25
SF3B1-205ENST00000424674 CLPSL2Q6UWE3 100 aa0.98□□□□□ -2.25
SF3B1-205ENST00000424674 TTC28Q96AY4 2481 aa0.98□□□□□ -2.25
SF3B1-205ENST00000424674 PCNX1Q96RV3 2341 aa0.98□□□□□ -2.25
SF3B1-205ENST00000424674 REV3LO60673 3130 aa0.95□□□□□ -2.26
SF3B1-205ENST00000424674 CELSR2Q9HCU4 2923 aa0.95□□□□□ -2.26
SF3B1-205ENST00000424674 SPTBN1Q01082 2364 aaKnown RBP0.95□□□□□ -2.26
SF3B1-205ENST00000424674 U3KQA8 63 aa0.95□□□□□ -2.26
SF3B1-205ENST00000424674 FBN3Q75N90 2809 aa0.95□□□□□ -2.26
SF3B1-205ENST00000424674 FCGBPQ9Y6R7 5405 aaPredicted RBP0.94□□□□□ -2.26
SF3B1-205ENST00000424674 M0QZ58 72 aa0.94□□□□□ -2.26
SF3B1-205ENST00000424674 LEAP2Q969E1 77 aa0.94□□□□□ -2.26
SF3B1-205ENST00000424674 USP24Q9UPU5 2620 aa0.93□□□□□ -2.26
SF3B1-205ENST00000424674 KNL1Q8NG31 2342 aa0.92□□□□□ -2.26
SF3B1-205ENST00000424674 KRTAP2-3P0C7H8 128 aa0.92□□□□□ -2.26
SF3B1-205ENST00000424674 KRTAP2-4Q9BYR9 128 aa0.92□□□□□ -2.26
SF3B1-205ENST00000424674 KRTAP2-1Q9BYU5 128 aa0.92□□□□□ -2.26
SF3B1-205ENST00000424674 TOMM7Q9P0U1 55 aa0.92□□□□□ -2.26
SF3B1-205ENST00000424674 ZNF292O60281 2723 aa0.92□□□□□ -2.26
SF3B1-205ENST00000424674 C9orf92A6NGG3 77 aa0.91□□□□□ -2.26
SF3B1-205ENST00000424674 LINC01590Q5TEZ4 76 aa0.91□□□□□ -2.26
SF3B1-205ENST00000424674 KRTAP19-3Q7Z4W3 81 aa0.91□□□□□ -2.26
SF3B1-205ENST00000424674 TENM4Q6N022 2769 aa0.91□□□□□ -2.26
SF3B1-205ENST00000424674 CHD9Q3L8U1 2897 aa0.91□□□□□ -2.26
SF3B1-205ENST00000424674 TPRP12270 2363 aaKnown RBP0.91□□□□□ -2.26
SF3B1-205ENST00000424674 PDE4DIPQ5VU43 2346 aa0.9□□□□□ -2.26
SF3B1-205ENST00000424674 DSPP15924 2871 aaKnown RBP0.9□□□□□ -2.27
SF3B1-205ENST00000424674 PRCDQ00LT1 54 aa0.89□□□□□ -2.27
SF3B1-205ENST00000424674 TTTY10Q9BZA0 68 aa0.89□□□□□ -2.27
SF3B1-205ENST00000424674 ABCA2Q9BZC7 2435 aa0.89□□□□□ -2.27
SF3B1-205ENST00000424674 IGF2RP11717 2491 aa0.87□□□□□ -2.27
SF3B1-205ENST00000424674 ABCA12Q86UK0 2595 aa0.87□□□□□ -2.27
SF3B1-205ENST00000424674 CELSR1Q9NYQ6 3014 aa0.86□□□□□ -2.27
SF3B1-205ENST00000424674 POLQO75417 2590 aa0.86□□□□□ -2.27
SF3B1-205ENST00000424674 CSPG4Q6UVK1 2322 aa0.86□□□□□ -2.27
SF3B1-205ENST00000424674 TRANK1O15050 2925 aa0.86□□□□□ -2.27
SF3B1-205ENST00000424674 TENM1Q9UKZ4 2725 aa0.86□□□□□ -2.27
SF3B1-205ENST00000424674 CSMD3Q7Z407 3707 aa0.86□□□□□ -2.27
SF3B1-205ENST00000424674 A0A0C4DFX4 3053 aa0.84□□□□□ -2.27
SF3B1-205ENST00000424674 HELZ2Q9BYK8 2649 aaKnown RBP0.84□□□□□ -2.27
SF3B1-205ENST00000424674 TNP1P09430 55 aa0.84□□□□□ -2.27
SF3B1-205ENST00000424674 F8P00451 2351 aa0.84□□□□□ -2.28
SF3B1-205ENST00000424674 VWFP04275 2813 aa0.83□□□□□ -2.28
SF3B1-205ENST00000424674 GVINP1Q7Z2Y8 2422 aa0.83□□□□□ -2.28
SF3B1-205ENST00000424674 PRM1P04553 51 aa0.83□□□□□ -2.28
SF3B1-205ENST00000424674 COL6A3P12111 3177 aa0.83□□□□□ -2.28
SF3B1-205ENST00000424674 FRAS1Q86XX4 4008 aa0.82□□□□□ -2.28
SF3B1-205ENST00000424674 AKAP6Q13023 2319 aa0.82□□□□□ -2.28
SF3B1-205ENST00000424674 UBR4Q5T4S7 5183 aa0.81□□□□□ -2.28
SF3B1-205ENST00000424674 PRRC2CQ9Y520 2896 aaKnown RBP0.81□□□□□ -2.28
SF3B1-205ENST00000424674 FBN2P35556 2912 aa0.81□□□□□ -2.28
SF3B1-205ENST00000424674 H3BNG1 76 aa0.81□□□□□ -2.28
SF3B1-205ENST00000424674 H3BSH0 61 aa0.81□□□□□ -2.28
SF3B1-205ENST00000424674 K7EIM0 57 aa0.81□□□□□ -2.28
SF3B1-205ENST00000424674 GPR98Q8WXG9 6306 aa0.8□□□□□ -2.28
SF3B1-205ENST00000424674 ANK2Q01484 3957 aa0.79□□□□□ -2.28
SF3B1-205ENST00000424674 BSNQ9UPA5 3926 aa0.79□□□□□ -2.28
SF3B1-205ENST00000424674 ZNF469Q96JG9 3925 aaPredicted RBP0.77□□□□□ -2.29
SF3B1-205ENST00000424674 EP300Q09472 2414 aaPredicted RBP0.77□□□□□ -2.29
SF3B1-205ENST00000424674 AHNAK2Q8IVF2 5795 aa0.76□□□□□ -2.29
SF3B1-205ENST00000424674 PRKDCP78527 4128 aaKnown RBP0.76□□□□□ -2.29
SF3B1-205ENST00000424674 BDP1A6H8Y1 2624 aa0.75□□□□□ -2.29
SF3B1-205ENST00000424674 SPART-AS1P0CW21 52 aa0.75□□□□□ -2.29
SF3B1-205ENST00000424674 DEFB104AQ8WTQ1 72 aa0.75□□□□□ -2.29
SF3B1-205ENST00000424674 AKAP13Q12802 2813 aa0.74□□□□□ -2.29
SF3B1-205ENST00000424674 DEFB110Q30KQ9 67 aa0.74□□□□□ -2.29
SF3B1-205ENST00000424674 TMEM167AQ8TBQ9 72 aa0.74□□□□□ -2.29
SF3B1-205ENST00000424674 FAT2Q9NYQ8 4349 aa0.74□□□□□ -2.29
SF3B1-205ENST00000424674 TNXBP22105 4242 aa0.74□□□□□ -2.29
SF3B1-205ENST00000424674 NOTCH1P46531 2555 aa0.74□□□□□ -2.29
SF3B1-205ENST00000424674 STAB1Q9NY15 2570 aa0.73□□□□□ -2.29
SF3B1-205ENST00000424674 OTOGQ6ZRI0 2925 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms