RNA–Protein interactions for RNA: ENST00000424408.6

LAMA4-207, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LAMA4, Length 5,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-207ENST00000424408 KRTAP1-1Q07627 177 aa7.24□□□□□ -1.25
LAMA4-207ENST00000424408 Q6ZR54 194 aa7.24□□□□□ -1.25
LAMA4-207ENST00000424408 M0QZ58 72 aa7.23□□□□□ -1.25
LAMA4-207ENST00000424408 A6NN06 94 aa7.22□□□□□ -1.25
LAMA4-207ENST00000424408 DNAH12Q6ZR08 3092 aa7.2□□□□□ -1.26
LAMA4-207ENST00000424408 KRTAP25-1Q3LHN0 102 aa7.19□□□□□ -1.26
LAMA4-207ENST00000424408 ADM2Q7Z4H4 148 aa7.18□□□□□ -1.26
LAMA4-207ENST00000424408 KRTAP29-1A8MX34 341 aaPredicted RBP7.17□□□□□ -1.26
LAMA4-207ENST00000424408 PRRC2CQ9Y520 2896 aaKnown RBP7.17□□□□□ -1.26
LAMA4-207ENST00000424408 USP24Q9UPU5 2620 aa7.14□□□□□ -1.27
LAMA4-207ENST00000424408 HECTD1Q9ULT8 2610 aa7.1□□□□□ -1.27
LAMA4-207ENST00000424408 KRTAP1-5Q9BYS1 174 aa7.1□□□□□ -1.27
LAMA4-207ENST00000424408 BPTFQ12830 3046 aa7.09□□□□□ -1.27
LAMA4-207ENST00000424408 A8MU10 97 aa7.09□□□□□ -1.27
LAMA4-207ENST00000424408 MGAM2Q2M2H8 2515 aa7.08□□□□□ -1.28
LAMA4-207ENST00000424408 NDUFAF8A1L188 74 aa7.08□□□□□ -1.28
LAMA4-207ENST00000424408 HELZ2Q9BYK8 2649 aaKnown RBP7.08□□□□□ -1.28
LAMA4-207ENST00000424408 PLAC4Q8WY50 150 aa7.08□□□□□ -1.28
LAMA4-207ENST00000424408 KRTAP4-16G5E9R7 235 aaPredicted RBP7.07□□□□□ -1.28
LAMA4-207ENST00000424408 SEC61BP60468 96 aaKnown RBP7.07□□□□□ -1.28
LAMA4-207ENST00000424408 A0A087X002 238 aa7.05□□□□□ -1.28
LAMA4-207ENST00000424408 NOTCH2NLQ7Z3S9 236 aa7.05□□□□□ -1.28
LAMA4-207ENST00000424408 PANO1I0J062 215 aa7.04□□□□□ -1.28
LAMA4-207ENST00000424408 C20orf166-AS1Q96NR2 134 aa7.03□□□□□ -1.28
LAMA4-207ENST00000424408 CEP350Q5VT06 3117 aa7.01□□□□□ -1.29
LAMA4-207ENST00000424408 KRTAP10-1P60331 282 aa7.01□□□□□ -1.29
LAMA4-207ENST00000424408 UTRNP46939 3433 aa7□□□□□ -1.29
LAMA4-207ENST00000424408 Q5VSD8 79 aa6.99□□□□□ -1.29
LAMA4-207ENST00000424408 KRTAP10-2P60368 255 aa6.98□□□□□ -1.29
LAMA4-207ENST00000424408 LCE6AA0A183 80 aa6.97□□□□□ -1.29
LAMA4-207ENST00000424408 FLNAP21333 2647 aaKnown RBP6.97□□□□□ -1.29
LAMA4-207ENST00000424408 KRTAP21-3Q3LHN1 58 aa6.95□□□□□ -1.3
LAMA4-207ENST00000424408 C5orf42Q9H799 3197 aa6.94□□□□□ -1.3
LAMA4-207ENST00000424408 ITPR3Q14573 2671 aa6.94□□□□□ -1.3
LAMA4-207ENST00000424408 BAHCC1Q9P281 2608 aa6.92□□□□□ -1.3
LAMA4-207ENST00000424408 ATRQ13535 2644 aa6.89□□□□□ -1.31
LAMA4-207ENST00000424408 A8MUU9 505 aa6.89□□□□□ -1.31
LAMA4-207ENST00000424408 CHD7Q9P2D1 2997 aa6.88□□□□□ -1.31
LAMA4-207ENST00000424408 KRTAP11-1Q8IUC1 163 aa6.87□□□□□ -1.31
LAMA4-207ENST00000424408 MAST4O15021 2626 aa6.85□□□□□ -1.31
LAMA4-207ENST00000424408 C10orf95Q9H7T3 257 aa6.83□□□□□ -1.32
LAMA4-207ENST00000424408 PCNTO95613 3336 aa6.81□□□□□ -1.32
LAMA4-207ENST00000424408 CFAP46Q8IYW2 2715 aa6.81□□□□□ -1.32
LAMA4-207ENST00000424408 KRTAP7-1Q8IUC3 87 aa6.79□□□□□ -1.32
LAMA4-207ENST00000424408 RPS29P62273 56 aaKnown RBP6.76□□□□□ -1.33
LAMA4-207ENST00000424408 SETXQ7Z333 2677 aaKnown RBP6.75□□□□□ -1.33
LAMA4-207ENST00000424408 ZNF292O60281 2723 aa6.75□□□□□ -1.33
LAMA4-207ENST00000424408 CENPEQ02224 2701 aa6.73□□□□□ -1.33
LAMA4-207ENST00000424408 AKAP13Q12802 2813 aa6.72□□□□□ -1.33
LAMA4-207ENST00000424408 CFAP54Q96N23 3096 aa6.72□□□□□ -1.33
LAMA4-207ENST00000424408 TNP1P09430 55 aa6.72□□□□□ -1.33
LAMA4-207ENST00000424408 CHD9Q3L8U1 2897 aa6.72□□□□□ -1.33
LAMA4-207ENST00000424408 KRTAP13-2Q52LG2 175 aa6.71□□□□□ -1.34
LAMA4-207ENST00000424408 CHD6Q8TD26 2715 aa6.7□□□□□ -1.34
LAMA4-207ENST00000424408 KRTAP13-1Q8IUC0 172 aa6.68□□□□□ -1.34
LAMA4-207ENST00000424408 MGAQ8IWI9 3026 aa6.66□□□□□ -1.34
LAMA4-207ENST00000424408 STAB1Q9NY15 2570 aa6.66□□□□□ -1.34
LAMA4-207ENST00000424408 HTTP42858 3142 aa6.64□□□□□ -1.35
LAMA4-207ENST00000424408 TEX15Q9BXT5 2789 aa6.64□□□□□ -1.35
LAMA4-207ENST00000424408 UNC79Q9P2D8 2635 aa6.64□□□□□ -1.35
LAMA4-207ENST00000424408 Q6ZRN7 208 aaPredicted RBP6.63□□□□□ -1.35
LAMA4-207ENST00000424408 RANBP2P49792 3224 aaKnown RBP6.63□□□□□ -1.35
LAMA4-207ENST00000424408 MKI67P46013 3256 aaKnown RBP6.6□□□□□ -1.35
LAMA4-207ENST00000424408 NBEAL1Q6ZS30 2694 aa6.59□□□□□ -1.35
LAMA4-207ENST00000424408 A0A0C4DFX4 3053 aa6.59□□□□□ -1.35
LAMA4-207ENST00000424408 TEP1Q99973 2627 aaKnown RBP6.57□□□□□ -1.36
LAMA4-207ENST00000424408 PP632Q6XCG6 107 aa6.57□□□□□ -1.36
LAMA4-207ENST00000424408 H0YAA0 97 aa6.56□□□□□ -1.36
LAMA4-207ENST00000424408 DMBT1Q9UGM3 2413 aaPredicted RBP6.56□□□□□ -1.36
LAMA4-207ENST00000424408 LAMA3Q16787 3333 aa6.56□□□□□ -1.36
LAMA4-207ENST00000424408 FLG2Q5D862 2391 aaPredicted RBP6.55□□□□□ -1.36
LAMA4-207ENST00000424408 TRANK1O15050 2925 aa6.55□□□□□ -1.36
LAMA4-207ENST00000424408 GCN1Q92616 2671 aaKnown RBP6.55□□□□□ -1.36
LAMA4-207ENST00000424408 P0C880 135 aa6.54□□□□□ -1.36
LAMA4-207ENST00000424408 LAMA2P24043 3122 aaKnown RBP6.53□□□□□ -1.36
LAMA4-207ENST00000424408 WDFY4Q6ZS81 3184 aa6.52□□□□□ -1.37
LAMA4-207ENST00000424408 IGSF10Q6WRI0 2623 aa6.52□□□□□ -1.37
LAMA4-207ENST00000424408 COL6A5A8TX70 2615 aa6.5□□□□□ -1.37
LAMA4-207ENST00000424408 KRTAP10-8P60410 259 aa6.48□□□□□ -1.37
LAMA4-207ENST00000424408 TRIOO75962 3097 aa6.47□□□□□ -1.37
LAMA4-207ENST00000424408 BRCA2P51587 3418 aa6.47□□□□□ -1.37
LAMA4-207ENST00000424408 NBEAL2Q6ZNJ1 2754 aa6.45□□□□□ -1.38
LAMA4-207ENST00000424408 NOTCH1P46531 2555 aa6.45□□□□□ -1.38
LAMA4-207ENST00000424408 PRUNE2Q8WUY3 3088 aa6.44□□□□□ -1.38
LAMA4-207ENST00000424408 DSPP15924 2871 aaKnown RBP6.41□□□□□ -1.38
LAMA4-207ENST00000424408 XIRP2A4UGR9 3374 aa6.4□□□□□ -1.38
LAMA4-207ENST00000424408 MAP1AP78559 2803 aaPredicted RBP6.39□□□□□ -1.39
LAMA4-207ENST00000424408 FRYQ5TBA9 3013 aa6.38□□□□□ -1.39
LAMA4-207ENST00000424408 UNC80Q8N2C7 3258 aa6.37□□□□□ -1.39
LAMA4-207ENST00000424408 A0A1B0GVY2 172 aa6.37□□□□□ -1.39
LAMA4-207ENST00000424408 VPS13AQ96RL7 3174 aa6.36□□□□□ -1.39
LAMA4-207ENST00000424408 UBR5O95071 2799 aaPredicted RBP6.35□□□□□ -1.39
LAMA4-207ENST00000424408 XP32Q5T750 250 aa6.34□□□□□ -1.4
LAMA4-207ENST00000424408 CELSR3Q9NYQ7 3312 aa6.3□□□□□ -1.4
LAMA4-207ENST00000424408 STAB2Q8WWQ8 2551 aa6.3□□□□□ -1.4
LAMA4-207ENST00000424408 FREM2Q5SZK8 3169 aa6.3□□□□□ -1.4
LAMA4-207ENST00000424408 ITPR2Q14571 2701 aa6.29□□□□□ -1.4
LAMA4-207ENST00000424408 KRTAP1-4P0C5Y4 121 aa6.28□□□□□ -1.4
LAMA4-207ENST00000424408 CDH23Q9H251 3354 aa6.26□□□□□ -1.41
LAMA4-207ENST00000424408 NSD1Q96L73 2696 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms