RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 SPRR1AP35321 89 aa1.35□□□□□ -2.19
PMS1-209ENST00000424059 KRTAP13-2Q52LG2 175 aa1.35□□□□□ -2.19
PMS1-209ENST00000424059 SPRR5A0A1B0GTR4 108 aa1.35□□□□□ -2.19
PMS1-209ENST00000424059 DEFB110Q30KQ9 67 aa1.35□□□□□ -2.19
PMS1-209ENST00000424059 AHNAK2Q8IVF2 5795 aa1.34□□□□□ -2.19
PMS1-209ENST00000424059 SPINK13Q1W4C9 94 aa1.34□□□□□ -2.19
PMS1-209ENST00000424059 ICE1Q9Y2F5 2266 aa1.34□□□□□ -2.19
PMS1-209ENST00000424059 COL6A3P12111 3177 aa1.34□□□□□ -2.2
PMS1-209ENST00000424059 MGAQ8IWI9 3026 aa1.33□□□□□ -2.2
PMS1-209ENST00000424059 MUC19Q7Z5P9 8384 aa1.33□□□□□ -2.2
PMS1-209ENST00000424059 IGF2RP11717 2491 aa1.32□□□□□ -2.2
PMS1-209ENST00000424059 PRLHP81277 87 aa1.32□□□□□ -2.2
PMS1-209ENST00000424059 PCNX1Q96RV3 2341 aa1.31□□□□□ -2.2
PMS1-209ENST00000424059 SPRR1BP22528 89 aa1.31□□□□□ -2.2
PMS1-209ENST00000424059 BRD3OSQ6XYD6 125 aa1.31□□□□□ -2.2
PMS1-209ENST00000424059 RHPN1-AS1Q9BWJ2 59 aa1.31□□□□□ -2.2
PMS1-209ENST00000424059 H3BUA1 57 aa1.3□□□□□ -2.2
PMS1-209ENST00000424059 DEFB108BQ8NET1 73 aa1.3□□□□□ -2.2
PMS1-209ENST00000424059 ZDBF2Q9HCK1 2354 aa1.3□□□□□ -2.2
PMS1-209ENST00000424059 GPR179Q6PRD1 2367 aa1.3□□□□□ -2.2
PMS1-209ENST00000424059 DEFB119Q8N690 84 aa1.3□□□□□ -2.2
PMS1-209ENST00000424059 APLNQ9ULZ1 77 aa1.3□□□□□ -2.2
PMS1-209ENST00000424059 S4R3F8 94 aa1.3□□□□□ -2.2
PMS1-209ENST00000424059 CACNA1BQ00975 2339 aa1.28□□□□□ -2.2
PMS1-209ENST00000424059 OTOGQ6ZRI0 2925 aa1.28□□□□□ -2.2
PMS1-209ENST00000424059 WNK2Q9Y3S1 2297 aa1.28□□□□□ -2.2
PMS1-209ENST00000424059 PIEZO2Q9H5I5 2752 aa1.28□□□□□ -2.2
PMS1-209ENST00000424059 SPINK1P00995 79 aa1.28□□□□□ -2.2
PMS1-209ENST00000424059 KRTAP13-4Q3LI77 160 aa1.28□□□□□ -2.2
PMS1-209ENST00000424059 HTN1P15515 57 aa1.27□□□□□ -2.21
PMS1-209ENST00000424059 WNK1Q9H4A3 2382 aa1.27□□□□□ -2.21
PMS1-209ENST00000424059 PTPRZ1P23471 2315 aaPredicted RBP1.26□□□□□ -2.21
PMS1-209ENST00000424059 REV3LO60673 3130 aa1.26□□□□□ -2.21
PMS1-209ENST00000424059 TPRP12270 2363 aaKnown RBP1.26□□□□□ -2.21
PMS1-209ENST00000424059 OTOGLQ3ZCN5 2332 aa1.26□□□□□ -2.21
PMS1-209ENST00000424059 TENM2Q9NT68 2774 aa1.25□□□□□ -2.21
PMS1-209ENST00000424059 SPTBN1Q01082 2364 aaKnown RBP1.24□□□□□ -2.21
PMS1-209ENST00000424059 CEP350Q5VT06 3117 aa1.24□□□□□ -2.21
PMS1-209ENST00000424059 DSPP15924 2871 aaKnown RBP1.23□□□□□ -2.21
PMS1-209ENST00000424059 FBN1P35555 2871 aaKnown RBP1.23□□□□□ -2.21
PMS1-209ENST00000424059 KRTAP12-1P59990 96 aa1.23□□□□□ -2.21
PMS1-209ENST00000424059 FAM208BQ5VWN6 2430 aa1.23□□□□□ -2.21
PMS1-209ENST00000424059 A0A0D9SG42 100 aa1.23□□□□□ -2.21
PMS1-209ENST00000424059 H3BUX3 64 aa1.23□□□□□ -2.21
PMS1-209ENST00000424059 CD52P31358 61 aa1.23□□□□□ -2.21
PMS1-209ENST00000424059 DEFB136Q30KP8 78 aa1.23□□□□□ -2.21
PMS1-209ENST00000424059 PRO0255Q9UI72 69 aa1.23□□□□□ -2.21
PMS1-209ENST00000424059 ASH1LQ9NR48 2969 aaKnown RBP1.22□□□□□ -2.21
PMS1-209ENST00000424059 Q5VSD8 79 aa1.22□□□□□ -2.21
PMS1-209ENST00000424059 NOP10Q9NPE3 64 aaKnown RBP1.22□□□□□ -2.21
PMS1-209ENST00000424059 WDR87Q6ZQQ6 2873 aa1.21□□□□□ -2.22
PMS1-209ENST00000424059 PKDREJQ9NTG1 2253 aa1.21□□□□□ -2.22
PMS1-209ENST00000424059 VPS13DQ5THJ4 4388 aa1.2□□□□□ -2.22
PMS1-209ENST00000424059 ROS1P08922 2347 aa1.2□□□□□ -2.22
PMS1-209ENST00000424059 KRTAP21-2Q3LI59 83 aa1.2□□□□□ -2.22
PMS1-209ENST00000424059 CELSR2Q9HCU4 2923 aa1.19□□□□□ -2.22
PMS1-209ENST00000424059 AKAP6Q13023 2319 aa1.19□□□□□ -2.22
PMS1-209ENST00000424059 DEFB103AP81534 67 aa1.19□□□□□ -2.22
PMS1-209ENST00000424059 CHD6Q8TD26 2715 aa1.19□□□□□ -2.22
PMS1-209ENST00000424059 SYNE2Q8WXH0 6885 aaKnown RBP1.18□□□□□ -2.22
PMS1-209ENST00000424059 CFAP54Q96N23 3096 aa1.18□□□□□ -2.22
PMS1-209ENST00000424059 JMJD1CQ15652 2540 aa1.18□□□□□ -2.22
PMS1-209ENST00000424059 ZNF462Q96JM2 2506 aa1.18□□□□□ -2.22
PMS1-209ENST00000424059 TNRC18O15417 2968 aaPredicted RBP1.18□□□□□ -2.22
PMS1-209ENST00000424059 NBPF19A0A087WUL8 3843 aa1.18□□□□□ -2.22
PMS1-209ENST00000424059 Q9Y3F1 56 aa1.18□□□□□ -2.22
PMS1-209ENST00000424059 CACNA1GO43497 2377 aa1.18□□□□□ -2.22
PMS1-209ENST00000424059 BAHCC1Q9P281 2608 aa1.17□□□□□ -2.22
PMS1-209ENST00000424059 ACACAQ13085 2346 aa1.17□□□□□ -2.22
PMS1-209ENST00000424059 RANBP2P49792 3224 aaKnown RBP1.17□□□□□ -2.22
PMS1-209ENST00000424059 HIVEP2P31629 2446 aa1.17□□□□□ -2.22
PMS1-209ENST00000424059 CELSR1Q9NYQ6 3014 aa1.17□□□□□ -2.22
PMS1-209ENST00000424059 PRRC2CQ9Y520 2896 aaKnown RBP1.16□□□□□ -2.22
PMS1-209ENST00000424059 CSPG4Q6UVK1 2322 aa1.16□□□□□ -2.22
PMS1-209ENST00000424059 A0A096LNI7 61 aa1.16□□□□□ -2.22
PMS1-209ENST00000424059 NBEAQ8NFP9 2946 aa1.16□□□□□ -2.22
PMS1-209ENST00000424059 PRUNE2Q8WUY3 3088 aa1.15□□□□□ -2.22
PMS1-209ENST00000424059 SPTBN4Q9H254 2564 aa1.15□□□□□ -2.23
PMS1-209ENST00000424059 MYCBP2O75592 4640 aa1.15□□□□□ -2.23
PMS1-209ENST00000424059 SPTA1P02549 2419 aa1.15□□□□□ -2.23
PMS1-209ENST00000424059 VWFP04275 2813 aa1.15□□□□□ -2.23
PMS1-209ENST00000424059 KRTAP13-1Q8IUC0 172 aa1.15□□□□□ -2.23
PMS1-209ENST00000424059 ZFHX4Q86UP3 3567 aa1.15□□□□□ -2.23
PMS1-209ENST00000424059 DNAH11Q96DT5 4516 aa1.14□□□□□ -2.23
PMS1-209ENST00000424059 A0A096LPF7 62 aa1.14□□□□□ -2.23
PMS1-209ENST00000424059 PCLOQ9Y6V0 5065 aa1.14□□□□□ -2.23
PMS1-209ENST00000424059 MUC6Q6W4X9 2439 aa1.14□□□□□ -2.23
PMS1-209ENST00000424059 KRTAP6-3Q3LI67 103 aa1.13□□□□□ -2.23
PMS1-209ENST00000424059 CRYBG3Q68DQ2 2970 aa1.13□□□□□ -2.23
PMS1-209ENST00000424059 SRCAPQ6ZRS2 3230 aa1.13□□□□□ -2.23
PMS1-209ENST00000424059 M0QZ58 72 aa1.13□□□□□ -2.23
PMS1-209ENST00000424059 SPINK6Q6UWN8 80 aa1.13□□□□□ -2.23
PMS1-209ENST00000424059 AKAP9Q99996 3911 aa1.13□□□□□ -2.23
PMS1-209ENST00000424059 DSTQ03001 7570 aaKnown RBP1.13□□□□□ -2.23
PMS1-209ENST00000424059 ZZEF1O43149 2961 aa1.12□□□□□ -2.23
PMS1-209ENST00000424059 SPTBN2O15020 2390 aa1.12□□□□□ -2.23
PMS1-209ENST00000424059 TRANK1O15050 2925 aa1.12□□□□□ -2.23
PMS1-209ENST00000424059 UBR5O95071 2799 aaPredicted RBP1.12□□□□□ -2.23
PMS1-209ENST00000424059 C5orf42Q9H799 3197 aa1.12□□□□□ -2.23
PMS1-209ENST00000424059 DEFB133Q30KQ1 61 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms