RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 TEX49A0A1B0GTD5 131 aa6.27□□□□□ -1.41
USP49-204ENST00000423567 SLC25A20O43772 301 aa6.27□□□□□ -1.41
USP49-204ENST00000423567 DEFB105AQ8NG35 78 aa6.27□□□□□ -1.41
USP49-204ENST00000423567 C14orf144Q96I85 54 aa6.27□□□□□ -1.41
USP49-204ENST00000423567 RPS29P62273 56 aaKnown RBP6.26□□□□□ -1.41
USP49-204ENST00000423567 FP248Q71RG6 208 aaPredicted RBP6.26□□□□□ -1.41
USP49-204ENST00000423567 LPAP08519 4548 aa6.26□□□□□ -1.41
USP49-204ENST00000423567 C12orf57Q99622 126 aa6.25□□□□□ -1.41
USP49-204ENST00000423567 HIGD1BQ9P298 99 aa6.25□□□□□ -1.41
USP49-204ENST00000423567 C9orf118A6NHY6 69 aa6.24□□□□□ -1.41
USP49-204ENST00000423567 Q1RN00 199 aa6.24□□□□□ -1.41
USP49-204ENST00000423567 TPRXLQ17RH7 258 aa6.23□□□□□ -1.41
USP49-204ENST00000423567 RAB37Q96AX2 223 aa6.23□□□□□ -1.41
USP49-204ENST00000423567 TMA7Q9Y2S6 64 aaKnown RBP6.23□□□□□ -1.41
USP49-204ENST00000423567 IGLV5-48A0A075B6I7 105 aa6.22□□□□□ -1.41
USP49-204ENST00000423567 BVES-AS1Q5T3Y7 98 aa6.22□□□□□ -1.41
USP49-204ENST00000423567 PRO1933Q9H354 126 aa6.22□□□□□ -1.41
USP49-204ENST00000423567 hADV29S1A0JD25 119 aa6.21□□□□□ -1.42
USP49-204ENST00000423567 LINC00575Q6W349 94 aa6.21□□□□□ -1.42
USP49-204ENST00000423567 LIMD2Q9BT23 127 aa6.21□□□□□ -1.42
USP49-204ENST00000423567 KRTAP3-1Q9BYR8 98 aa6.21□□□□□ -1.42
USP49-204ENST00000423567 F8WEM9 126 aa6.2□□□□□ -1.42
USP49-204ENST00000423567 H7C2G1 150 aa6.2□□□□□ -1.42
USP49-204ENST00000423567 Q8N377 158 aa6.2□□□□□ -1.42
USP49-204ENST00000423567 SNCGO76070 127 aa6.19□□□□□ -1.42
USP49-204ENST00000423567 LINC01547P58512 204 aaPredicted RBP6.19□□□□□ -1.42
USP49-204ENST00000423567 PYY3Q5JQD4 70 aa6.19□□□□□ -1.42
USP49-204ENST00000423567 HRCT1Q6UXD1 115 aa6.19□□□□□ -1.42
USP49-204ENST00000423567 C2orf91Q6ZV80 131 aa6.19□□□□□ -1.42
USP49-204ENST00000423567 A0A0B4J2C4 111 aa6.18□□□□□ -1.42
USP49-204ENST00000423567 CFC1BP0CG36 223 aa6.18□□□□□ -1.42
USP49-204ENST00000423567 CFC1P0CG37 223 aa6.18□□□□□ -1.42
USP49-204ENST00000423567 CD164Q04900 197 aa6.18□□□□□ -1.42
USP49-204ENST00000423567 Q6ZQY7 126 aa6.18□□□□□ -1.42
USP49-204ENST00000423567 SMIM29Q86T20 159 aa6.18□□□□□ -1.42
USP49-204ENST00000423567 CEND1Q8N111 149 aa6.18□□□□□ -1.42
USP49-204ENST00000423567 RNF213Q63HN8 5207 aa6.17□□□□□ -1.42
USP49-204ENST00000423567 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.16□□□□□ -1.42
USP49-204ENST00000423567 H0YGX0 51 aa6.15□□□□□ -1.42
USP49-204ENST00000423567 HSD52Q0P140 79 aa6.14□□□□□ -1.43
USP49-204ENST00000423567 KRTAP13-3Q3SY46 172 aa6.14□□□□□ -1.43
USP49-204ENST00000423567 PPDPFLQ8WWR9 84 aa6.14□□□□□ -1.43
USP49-204ENST00000423567 PRO1854Q9UHT4 67 aa6.14□□□□□ -1.43
USP49-204ENST00000423567 SNHG12Q9BXW3 62 aa6.13□□□□□ -1.43
USP49-204ENST00000423567 UQCR10Q9UDW1 63 aa6.13□□□□□ -1.43
USP49-204ENST00000423567 FXYD2P54710 66 aa6.12□□□□□ -1.43
USP49-204ENST00000423567 OCIAD2Q56VL3 154 aa6.12□□□□□ -1.43
USP49-204ENST00000423567 Q6JHZ5 121 aa6.12□□□□□ -1.43
USP49-204ENST00000423567 A0A0U1RQV1 116 aa6.11□□□□□ -1.43
USP49-204ENST00000423567 TCL1BO95988 128 aa6.1□□□□□ -1.43
USP49-204ENST00000423567 Q5XG85 94 aa6.1□□□□□ -1.43
USP49-204ENST00000423567 A0A0G2JQZ4 141 aa6.09□□□□□ -1.43
USP49-204ENST00000423567 A0A1B0GX51 115 aa6.09□□□□□ -1.43
USP49-204ENST00000423567 CLEC2BQ92478 149 aa6.09□□□□□ -1.43
USP49-204ENST00000423567 IGLV8-61A0A075B6I0 122 aa6.08□□□□□ -1.44
USP49-204ENST00000423567 PSMB2P49721 201 aa6.08□□□□□ -1.44
USP49-204ENST00000423567 TRIAP1O43715 76 aa6.07□□□□□ -1.44
USP49-204ENST00000423567 COX6CP09669 75 aa6.07□□□□□ -1.44
USP49-204ENST00000423567 SEC61BP60468 96 aaKnown RBP6.07□□□□□ -1.44
USP49-204ENST00000423567 IGFL1Q6UW32 110 aa6.07□□□□□ -1.44
USP49-204ENST00000423567 FAM218AQ96MZ4 157 aa6.07□□□□□ -1.44
USP49-204ENST00000423567 K7ERJ3 54 aa6.06□□□□□ -1.44
USP49-204ENST00000423567 DNAL4O96015 105 aa6.06□□□□□ -1.44
USP49-204ENST00000423567 TRBV7-7A0A0K0K1E9 115 aa6.05□□□□□ -1.44
USP49-204ENST00000423567 H3BUT2 72 aa6.05□□□□□ -1.44
USP49-204ENST00000423567 C1orf195Q5TG92 126 aa6.05□□□□□ -1.44
USP49-204ENST00000423567 FABP2P12104 132 aa6.04□□□□□ -1.44
USP49-204ENST00000423567 NDUFV3P56181 108 aaKnown RBP6.04□□□□□ -1.44
USP49-204ENST00000423567 ASB16-AS1Q495Z4 193 aa6.04□□□□□ -1.44
USP49-204ENST00000423567 MUC17Q685J3 4493 aa6.03□□□□□ -1.44
USP49-204ENST00000423567 C9orf92A6NGG3 77 aa6.03□□□□□ -1.44
USP49-204ENST00000423567 H3BQ85 93 aa6.03□□□□□ -1.44
USP49-204ENST00000423567 ORMDL1Q9P0S3 153 aa6.02□□□□□ -1.45
USP49-204ENST00000423567 H3BMG7 143 aa6.01□□□□□ -1.45
USP49-204ENST00000423567 SMIM6P0DI80 62 aa6.01□□□□□ -1.45
USP49-204ENST00000423567 SCGB1C2P0DMR2 95 aa6.01□□□□□ -1.45
USP49-204ENST00000423567 SS18L2Q9UHA2 77 aa6.01□□□□□ -1.45
USP49-204ENST00000423567 MUC2Q02817 5179 aa6□□□□□ -1.45
USP49-204ENST00000423567 M0R143 59 aa5.99□□□□□ -1.45
USP49-204ENST00000423567 Q6Q795 121 aa5.99□□□□□ -1.45
USP49-204ENST00000423567 TEN1Q86WV5 123 aa5.99□□□□□ -1.45
USP49-204ENST00000423567 TMEM256-PLSCR3K7ERE1 68 aa5.98□□□□□ -1.45
USP49-204ENST00000423567 LST1O00453 97 aa5.98□□□□□ -1.45
USP49-204ENST00000423567 TRACP01848 142 aa5.96□□□□□ -1.46
USP49-204ENST00000423567 A0A087WSZ3 146 aa5.95□□□□□ -1.46
USP49-204ENST00000423567 TSTD3H0UI37 97 aa5.95□□□□□ -1.46
USP49-204ENST00000423567 ANKRD29Q8N6D5 301 aa5.95□□□□□ -1.46
USP49-204ENST00000423567 A0A1B0GV72 72 aa5.94□□□□□ -1.46
USP49-204ENST00000423567 PCOTHQ58A44 107 aa5.94□□□□□ -1.46
USP49-204ENST00000423567 UBE2V1Q13404 147 aa5.93□□□□□ -1.46
USP49-204ENST00000423567 FAT4Q6V0I7 4981 aa5.91□□□□□ -1.46
USP49-204ENST00000423567 A0A1W2PNM2 257 aa5.91□□□□□ -1.46
USP49-204ENST00000423567 RPL37P61927 97 aaKnown RBP5.91□□□□□ -1.46
USP49-204ENST00000423567 TRBV7-4A0A0J9YYF1 115 aa5.9□□□□□ -1.46
USP49-204ENST00000423567 ATXN8Q156A1 80 aa5.9□□□□□ -1.46
USP49-204ENST00000423567 CCKP06307 115 aa5.89□□□□□ -1.47
USP49-204ENST00000423567 RBM3P98179 157 aaKnown RBP5.89□□□□□ -1.47
USP49-204ENST00000423567 LYRM7Q5U5X0 104 aa5.89□□□□□ -1.47
USP49-204ENST00000423567 OBSCN-AS1Q96MR7 158 aa5.89□□□□□ -1.47
USP49-204ENST00000423567 KRTAP4-1Q9BYQ7 146 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms