RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 TRIAP1O43715 76 aa9.06□□□□□ -0.96
BRAT1-202ENST00000421712 SMIM29Q86T20 159 aa9.06□□□□□ -0.96
BRAT1-202ENST00000421712 F8WEM9 126 aa9.05□□□□□ -0.96
BRAT1-202ENST00000421712 HRCT1Q6UXD1 115 aa9.05□□□□□ -0.96
BRAT1-202ENST00000421712 M0R143 59 aa9.04□□□□□ -0.96
BRAT1-202ENST00000421712 COX6CP09669 75 aa9.04□□□□□ -0.96
BRAT1-202ENST00000421712 FAM218AQ96MZ4 157 aa9.04□□□□□ -0.96
BRAT1-202ENST00000421712 SNHG12Q9BXW3 62 aa9.03□□□□□ -0.96
BRAT1-202ENST00000421712 SCGB1C2P0DMR2 95 aa9.01□□□□□ -0.97
BRAT1-202ENST00000421712 A0A1B0GX51 115 aa9□□□□□ -0.97
BRAT1-202ENST00000421712 OCIAD2Q56VL3 154 aa9□□□□□ -0.97
BRAT1-202ENST00000421712 PPDPFLQ8WWR9 84 aa9□□□□□ -0.97
BRAT1-202ENST00000421712 CLEC2BQ92478 149 aa9□□□□□ -0.97
BRAT1-202ENST00000421712 RPS29P62273 56 aaKnown RBP8.99□□□□□ -0.97
BRAT1-202ENST00000421712 DNAL4O96015 105 aa8.98□□□□□ -0.97
BRAT1-202ENST00000421712 IGLV7-46A0A075B6I9 117 aa8.97□□□□□ -0.97
BRAT1-202ENST00000421712 A0A0G2JQZ4 141 aa8.97□□□□□ -0.97
BRAT1-202ENST00000421712 GHRHP01286 108 aa8.97□□□□□ -0.97
BRAT1-202ENST00000421712 FABP2P12104 132 aa8.96□□□□□ -0.98
BRAT1-202ENST00000421712 BATFQ16520 125 aa8.96□□□□□ -0.98
BRAT1-202ENST00000421712 CD164Q04900 197 aa8.95□□□□□ -0.98
BRAT1-202ENST00000421712 LIMD2Q9BT23 127 aa8.95□□□□□ -0.98
BRAT1-202ENST00000421712 Q6JHZ5 121 aa8.93□□□□□ -0.98
BRAT1-202ENST00000421712 FP248Q71RG6 208 aaPredicted RBP8.93□□□□□ -0.98
BRAT1-202ENST00000421712 NDUFV3P56181 108 aaKnown RBP8.92□□□□□ -0.98
BRAT1-202ENST00000421712 ORMDL1Q9P0S3 153 aa8.92□□□□□ -0.98
BRAT1-202ENST00000421712 LRP2P98164 4655 aa8.92□□□□□ -0.98
BRAT1-202ENST00000421712 H3BUT2 72 aa8.91□□□□□ -0.98
BRAT1-202ENST00000421712 NAA38Q9BRA0 125 aaKnown RBP8.91□□□□□ -0.98
BRAT1-202ENST00000421712 LPAP08519 4548 aa8.9□□□□□ -0.98
BRAT1-202ENST00000421712 IGLV8-61A0A075B6I0 122 aa8.9□□□□□ -0.98
BRAT1-202ENST00000421712 IGFL1Q6UW32 110 aa8.9□□□□□ -0.98
BRAT1-202ENST00000421712 H3BQ85 93 aa8.89□□□□□ -0.99
BRAT1-202ENST00000421712 H3BMG7 143 aa8.87□□□□□ -0.99
BRAT1-202ENST00000421712 TMEM256-PLSCR3K7ERE1 68 aa8.87□□□□□ -0.99
BRAT1-202ENST00000421712 LST1O00453 97 aa8.87□□□□□ -0.99
BRAT1-202ENST00000421712 TRACP01848 142 aa8.87□□□□□ -0.99
BRAT1-202ENST00000421712 CDIP1Q9H305 208 aa8.87□□□□□ -0.99
BRAT1-202ENST00000421712 TCL1BO95988 128 aa8.86□□□□□ -0.99
BRAT1-202ENST00000421712 TPRXLQ17RH7 258 aa8.86□□□□□ -0.99
BRAT1-202ENST00000421712 A0A1B0GV72 72 aa8.84□□□□□ -0.99
BRAT1-202ENST00000421712 TRBV7-7A0A0K0K1E9 115 aa8.83□□□□□ -1
BRAT1-202ENST00000421712 ATXN8Q156A1 80 aa8.83□□□□□ -1
BRAT1-202ENST00000421712 LYRM7Q5U5X0 104 aa8.82□□□□□ -1
BRAT1-202ENST00000421712 Q5XG85 94 aa8.82□□□□□ -1
BRAT1-202ENST00000421712 BAALC-AS2P0C853 105 aa8.8□□□□□ -1
BRAT1-202ENST00000421712 UBE2V1Q13404 147 aa8.8□□□□□ -1
BRAT1-202ENST00000421712 ANKRD29Q8N6D5 301 aa8.8□□□□□ -1
BRAT1-202ENST00000421712 KRTAP13-3Q3SY46 172 aa8.79□□□□□ -1
BRAT1-202ENST00000421712 C1orf195Q5TG92 126 aa8.79□□□□□ -1
BRAT1-202ENST00000421712 C9orf118A6NHY6 69 aa8.78□□□□□ -1
BRAT1-202ENST00000421712 TEN1Q86WV5 123 aa8.78□□□□□ -1
BRAT1-202ENST00000421712 RNF213Q63HN8 5207 aa8.77□□□□□ -1.01
BRAT1-202ENST00000421712 TRBV20-1A0A075B6N2 111 aa8.76□□□□□ -1.01
BRAT1-202ENST00000421712 TAX1BP3O14907 124 aa8.76□□□□□ -1.01
BRAT1-202ENST00000421712 Q6Q795 121 aa8.75□□□□□ -1.01
BRAT1-202ENST00000421712 RBM3P98179 157 aaKnown RBP8.74□□□□□ -1.01
BRAT1-202ENST00000421712 SS18L2Q9UHA2 77 aa8.74□□□□□ -1.01
BRAT1-202ENST00000421712 A0A087WSZ3 146 aa8.73□□□□□ -1.01
BRAT1-202ENST00000421712 PCP4L1A6NKN8 68 aa8.73□□□□□ -1.01
BRAT1-202ENST00000421712 ASB16-AS1Q495Z4 193 aa8.73□□□□□ -1.01
BRAT1-202ENST00000421712 DSCR8Q96T75 97 aa8.73□□□□□ -1.01
BRAT1-202ENST00000421712 A0A1W2PNM2 257 aa8.72□□□□□ -1.01
BRAT1-202ENST00000421712 A0A1W2PPM0 123 aa8.72□□□□□ -1.01
BRAT1-202ENST00000421712 C9orf92A6NGG3 77 aa8.72□□□□□ -1.01
BRAT1-202ENST00000421712 C9JAW5 83 aa8.71□□□□□ -1.02
BRAT1-202ENST00000421712 VPS25Q9BRG1 176 aa8.71□□□□□ -1.02
BRAT1-202ENST00000421712 CCKP06307 115 aa8.7□□□□□ -1.02
BRAT1-202ENST00000421712 COL5A1-AS1Q5SY13 56 aa8.7□□□□□ -1.02
BRAT1-202ENST00000421712 TRBV7-4A0A0J9YYF1 115 aa8.68□□□□□ -1.02
BRAT1-202ENST00000421712 JMJD7-PLA2G4BH0Y9G9 81 aa8.66□□□□□ -1.02
BRAT1-202ENST00000421712 XP32Q5T750 250 aa8.65□□□□□ -1.02
BRAT1-202ENST00000421712 SPCS1Q9Y6A9 102 aa8.64□□□□□ -1.03
BRAT1-202ENST00000421712 SEC61BP60468 96 aaKnown RBP8.63□□□□□ -1.03
BRAT1-202ENST00000421712 MTURNQ8N3F0 131 aa8.63□□□□□ -1.03
BRAT1-202ENST00000421712 H3BT86 120 aa8.6□□□□□ -1.03
BRAT1-202ENST00000421712 SIGMAR1Q99720 223 aa8.59□□□□□ -1.03
BRAT1-202ENST00000421712 C14orf132Q9NPU4 83 aa8.59□□□□□ -1.03
BRAT1-202ENST00000421712 IGKV4-1P06312 121 aa8.58□□□□□ -1.04
BRAT1-202ENST00000421712 PDE6GP18545 87 aa8.58□□□□□ -1.04
BRAT1-202ENST00000421712 Q96NJ1 140 aa8.58□□□□□ -1.04
BRAT1-202ENST00000421712 LOC110117498A0A087WWA1 95 aa8.57□□□□□ -1.04
BRAT1-202ENST00000421712 Q6ZQT0 140 aa8.57□□□□□ -1.04
BRAT1-202ENST00000421712 DEFB116Q30KQ4 102 aa8.56□□□□□ -1.04
BRAT1-202ENST00000421712 OBSCN-AS1Q96MR7 158 aa8.56□□□□□ -1.04
BRAT1-202ENST00000421712 C21orf62-AS1Q17RA5 79 aa8.55□□□□□ -1.04
BRAT1-202ENST00000421712 MUC17Q685J3 4493 aa8.53□□□□□ -1.04
BRAT1-202ENST00000421712 K7EP34 96 aa8.52□□□□□ -1.05
BRAT1-202ENST00000421712 LINC00472Q9H8W2 130 aa8.52□□□□□ -1.05
BRAT1-202ENST00000421712 PCOTHQ58A44 107 aa8.51□□□□□ -1.05
BRAT1-202ENST00000421712 GTF2H5Q6ZYL4 71 aa8.5□□□□□ -1.05
BRAT1-202ENST00000421712 A0A0U1RQV1 116 aa8.49□□□□□ -1.05
BRAT1-202ENST00000421712 A0A1B0GW54 56 aa8.49□□□□□ -1.05
BRAT1-202ENST00000421712 RPL37P61927 97 aaKnown RBP8.49□□□□□ -1.05
BRAT1-202ENST00000421712 DSCR10P59022 87 aa8.48□□□□□ -1.05
BRAT1-202ENST00000421712 SMCPP49901 116 aaPredicted RBP8.47□□□□□ -1.05
BRAT1-202ENST00000421712 LINC00313P59037 77 aa8.47□□□□□ -1.05
BRAT1-202ENST00000421712 MUC2Q02817 5179 aa8.46□□□□□ -1.06
BRAT1-202ENST00000421712 IGHV6-1A0A0B4J1U7 121 aa8.46□□□□□ -1.06
BRAT1-202ENST00000421712 J3KT08 172 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms