RNA–Protein interactions for RNA: ENST00000415361.6

CTNND1-206, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-206ENST00000415361 ATMQ13315 3056 aa5.44□□□□□ -1.54
CTNND1-206ENST00000415361 A0A1W2PNN7 141 aa5.44□□□□□ -1.54
CTNND1-206ENST00000415361 KLKP1Q107X0 134 aa5.44□□□□□ -1.54
CTNND1-206ENST00000415361 NOTCH1P46531 2555 aa5.44□□□□□ -1.54
CTNND1-206ENST00000415361 SPTBN5Q9NRC6 3674 aaKnown RBP5.44□□□□□ -1.54
CTNND1-206ENST00000415361 WIPF1O43516 503 aa5.43□□□□□ -1.54
CTNND1-206ENST00000415361 COL12A1Q99715 3063 aa5.43□□□□□ -1.54
CTNND1-206ENST00000415361 BOD1L1Q8NFC6 3051 aa5.43□□□□□ -1.54
CTNND1-206ENST00000415361 SPANXA2-OT1Q8N9U9 137 aa5.43□□□□□ -1.54
CTNND1-206ENST00000415361 UBR5O95071 2799 aaPredicted RBP5.41□□□□□ -1.54
CTNND1-206ENST00000415361 A8MUN3 132 aa5.4□□□□□ -1.54
CTNND1-206ENST00000415361 FAM229BQ4G0N7 80 aa5.4□□□□□ -1.55
CTNND1-206ENST00000415361 DMXL1Q9Y485 3027 aa5.4□□□□□ -1.55
CTNND1-206ENST00000415361 TNP2Q05952 138 aa5.4□□□□□ -1.55
CTNND1-206ENST00000415361 FAM104AQ969W3 186 aa5.4□□□□□ -1.55
CTNND1-206ENST00000415361 Q6ZSA8 131 aa5.39□□□□□ -1.55
CTNND1-206ENST00000415361 IGLV5-48A0A075B6I7 105 aa5.38□□□□□ -1.55
CTNND1-206ENST00000415361 REV3LO60673 3130 aa5.38□□□□□ -1.55
CTNND1-206ENST00000415361 CDC42SE1Q9NRR8 79 aa5.38□□□□□ -1.55
CTNND1-206ENST00000415361 ANAPC11Q9NYG5 84 aa5.37□□□□□ -1.55
CTNND1-206ENST00000415361 TACC2O95359 2948 aa5.37□□□□□ -1.55
CTNND1-206ENST00000415361 ITPR2Q14571 2701 aa5.37□□□□□ -1.55
CTNND1-206ENST00000415361 A0A1W2PNM2 257 aa5.37□□□□□ -1.55
CTNND1-206ENST00000415361 FREM2Q5SZK8 3169 aa5.37□□□□□ -1.55
CTNND1-206ENST00000415361 EIF4EBP3O60516 100 aaPredicted RBP5.36□□□□□ -1.55
CTNND1-206ENST00000415361 NBEAL1Q6ZS30 2694 aa5.36□□□□□ -1.55
CTNND1-206ENST00000415361 IGLV7-46A0A075B6I9 117 aa5.35□□□□□ -1.55
CTNND1-206ENST00000415361 ITPR1Q14643 2758 aa5.34□□□□□ -1.55
CTNND1-206ENST00000415361 HIVEP1P15822 2718 aa5.33□□□□□ -1.56
CTNND1-206ENST00000415361 A0A0G2JQZ4 141 aa5.32□□□□□ -1.56
CTNND1-206ENST00000415361 H7BZZ5 65 aa5.32□□□□□ -1.56
CTNND1-206ENST00000415361 ADGRG4Q8IZF6 3080 aa5.32□□□□□ -1.56
CTNND1-206ENST00000415361 PLAC8Q9NZF1 115 aa5.31□□□□□ -1.56
CTNND1-206ENST00000415361 UTP20O75691 2785 aaKnown RBP5.31□□□□□ -1.56
CTNND1-206ENST00000415361 NBEAQ8NFP9 2946 aa5.31□□□□□ -1.56
CTNND1-206ENST00000415361 Q8N1X5 172 aa5.31□□□□□ -1.56
CTNND1-206ENST00000415361 LINC01554Q52M75 96 aa5.3□□□□□ -1.56
CTNND1-206ENST00000415361 SPEGQ15772 3267 aa5.3□□□□□ -1.56
CTNND1-206ENST00000415361 ZZEF1O43149 2961 aa5.29□□□□□ -1.56
CTNND1-206ENST00000415361 KALRNO60229 2985 aa5.28□□□□□ -1.56
CTNND1-206ENST00000415361 PRR26Q8N8Z3 221 aa5.28□□□□□ -1.56
CTNND1-206ENST00000415361 USP34Q70CQ2 3546 aa5.28□□□□□ -1.56
CTNND1-206ENST00000415361 HRES1P13985 223 aa5.28□□□□□ -1.56
CTNND1-206ENST00000415361 LRBAP50851 2863 aa5.28□□□□□ -1.56
CTNND1-206ENST00000415361 A0A0D9SG42 100 aa5.27□□□□□ -1.57
CTNND1-206ENST00000415361 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.27□□□□□ -1.57
CTNND1-206ENST00000415361 LINC00483Q53H64 154 aa5.27□□□□□ -1.57
CTNND1-206ENST00000415361 LCA10Q71F78 164 aa5.26□□□□□ -1.57
CTNND1-206ENST00000415361 KTN1-AS1Q86SY8 53 aa5.26□□□□□ -1.57
CTNND1-206ENST00000415361 APCP25054 2843 aa5.26□□□□□ -1.57
CTNND1-206ENST00000415361 M0R2T5 61 aa5.26□□□□□ -1.57
CTNND1-206ENST00000415361 ZCCHC13Q8WW36 166 aaKnown RBP5.26□□□□□ -1.57
CTNND1-206ENST00000415361 LCE6AA0A183 80 aa5.25□□□□□ -1.57
CTNND1-206ENST00000415361 NBEAL2Q6ZNJ1 2754 aa5.25□□□□□ -1.57
CTNND1-206ENST00000415361 NSD1Q96L73 2696 aaPredicted RBP5.25□□□□□ -1.57
CTNND1-206ENST00000415361 CAMK2N1Q7Z7J9 78 aa5.25□□□□□ -1.57
CTNND1-206ENST00000415361 CSAG1Q6PB30 78 aa5.24□□□□□ -1.57
CTNND1-206ENST00000415361 OCR1Q9BZK8 76 aa5.24□□□□□ -1.57
CTNND1-206ENST00000415361 LUZP6Q538Z0 58 aa5.24□□□□□ -1.57
CTNND1-206ENST00000415361 SEC61BP60468 96 aaKnown RBP5.24□□□□□ -1.57
CTNND1-206ENST00000415361 A0A1B0GU33 70 aa5.22□□□□□ -1.57
CTNND1-206ENST00000415361 S4R3F8 94 aa5.22□□□□□ -1.57
CTNND1-206ENST00000415361 Q1T7F1 81 aa5.22□□□□□ -1.57
CTNND1-206ENST00000415361 KRTAP1-5Q9BYS1 174 aa5.22□□□□□ -1.57
CTNND1-206ENST00000415361 SPRR1BP22528 89 aa5.22□□□□□ -1.57
CTNND1-206ENST00000415361 SPRR1AP35321 89 aa5.22□□□□□ -1.57
CTNND1-206ENST00000415361 CFAP47Q6ZTR5 3102 aa5.21□□□□□ -1.57
CTNND1-206ENST00000415361 CRYBG3Q68DQ2 2970 aa5.21□□□□□ -1.57
CTNND1-206ENST00000415361 DMAC1Q96GE9 116 aa5.2□□□□□ -1.58
CTNND1-206ENST00000415361 LOC400499M0QZD8 3231 aa5.19□□□□□ -1.58
CTNND1-206ENST00000415361 MMP24-AS1A0A0U1RRL7 71 aa5.19□□□□□ -1.58
CTNND1-206ENST00000415361 KRTAP21-3Q3LHN1 58 aa5.17□□□□□ -1.58
CTNND1-206ENST00000415361 TENM4Q6N022 2769 aa5.17□□□□□ -1.58
CTNND1-206ENST00000415361 Q75L30 129 aa5.17□□□□□ -1.58
CTNND1-206ENST00000415361 MYO15AQ9UKN7 3530 aa5.16□□□□□ -1.58
CTNND1-206ENST00000415361 Q5VSD8 79 aa5.15□□□□□ -1.58
CTNND1-206ENST00000415361 KRTAP10-2P60368 255 aa5.15□□□□□ -1.58
CTNND1-206ENST00000415361 FP248Q71RG6 208 aaPredicted RBP5.15□□□□□ -1.58
CTNND1-206ENST00000415361 OXTP01178 125 aa5.14□□□□□ -1.59
CTNND1-206ENST00000415361 LINC01558Q9Y6Z2 57 aa5.14□□□□□ -1.59
CTNND1-206ENST00000415361 ZANQ9Y493 2812 aa5.14□□□□□ -1.59
CTNND1-206ENST00000415361 STAB2Q8WWQ8 2551 aa5.14□□□□□ -1.59
CTNND1-206ENST00000415361 KMT2BQ9UMN6 2715 aaPredicted RBP5.14□□□□□ -1.59
CTNND1-206ENST00000415361 KRTAP10-1P60331 282 aa5.13□□□□□ -1.59
CTNND1-206ENST00000415361 Q5W150 140 aa5.12□□□□□ -1.59
CTNND1-206ENST00000415361 LINC00472Q9H8W2 130 aa5.12□□□□□ -1.59
CTNND1-206ENST00000415361 SPINK7P58062 85 aa5.11□□□□□ -1.59
CTNND1-206ENST00000415361 R4GN34 69 aa5.1□□□□□ -1.59
CTNND1-206ENST00000415361 CELSR2Q9HCU4 2923 aa5.09□□□□□ -1.59
CTNND1-206ENST00000415361 Q8N9P0 234 aaPredicted RBP5.09□□□□□ -1.6
CTNND1-206ENST00000415361 Q6ZR54 194 aa5.08□□□□□ -1.6
CTNND1-206ENST00000415361 KRTAP26-1Q6PEX3 210 aa5.07□□□□□ -1.6
CTNND1-206ENST00000415361 NIPBLQ6KC79 2804 aaeCLIP5.07□□□□□ -1.61e-6■□□□□ 9
CTNND1-206ENST00000415361 HRNRQ86YZ3 2850 aaPredicted RBP5.06□□□□□ -1.6
CTNND1-206ENST00000415361 Q8NDZ9 215 aa5.06□□□□□ -1.6
CTNND1-206ENST00000415361 DCHS2Q6V1P9 2916 aa5.03□□□□□ -1.6
CTNND1-206ENST00000415361 PANO1I0J062 215 aa5.02□□□□□ -1.61
CTNND1-206ENST00000415361 ASH1LQ9NR48 2969 aaKnown RBP5.02□□□□□ -1.61
CTNND1-206ENST00000415361 MUC3AQ02505 3323 aa5.02□□□□□ -1.61
CTNND1-206ENST00000415361 RPS29P62273 56 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms