RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 C2orf91Q6ZV80 131 aa8.26□□□□□ -1.09
LIMS4-201ENST00000413601 LIMD2Q9BT23 127 aa8.26□□□□□ -1.09
LIMS4-201ENST00000413601 KRTAP9-6A0A140TA67 174 aa8.25□□□□□ -1.09
LIMS4-201ENST00000413601 H7C2G1 150 aa8.25□□□□□ -1.09
LIMS4-201ENST00000413601 CFC1BP0CG36 223 aa8.25□□□□□ -1.09
LIMS4-201ENST00000413601 CFC1P0CG37 223 aa8.25□□□□□ -1.09
LIMS4-201ENST00000413601 CD164Q04900 197 aa8.25□□□□□ -1.09
LIMS4-201ENST00000413601 Q6ZQY7 126 aa8.25□□□□□ -1.09
LIMS4-201ENST00000413601 BVES-AS1Q5T3Y7 98 aa8.23□□□□□ -1.09
LIMS4-201ENST00000413601 RAB37Q96AX2 223 aa8.23□□□□□ -1.09
LIMS4-201ENST00000413601 MUC2Q02817 5179 aa8.22□□□□□ -1.09
LIMS4-201ENST00000413601 TMA7Q9Y2S6 64 aaKnown RBP8.22□□□□□ -1.09
LIMS4-201ENST00000413601 PYY3Q5JQD4 70 aa8.21□□□□□ -1.1
LIMS4-201ENST00000413601 A0A0B4J2C4 111 aa8.2□□□□□ -1.1
LIMS4-201ENST00000413601 F8WEM9 126 aa8.2□□□□□ -1.1
LIMS4-201ENST00000413601 CEND1Q8N111 149 aa8.2□□□□□ -1.1
LIMS4-201ENST00000413601 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.19□□□□□ -1.1
LIMS4-201ENST00000413601 A0A0U1RQV1 116 aa8.18□□□□□ -1.1
LIMS4-201ENST00000413601 MUC17Q685J3 4493 aa8.17□□□□□ -1.1
LIMS4-201ENST00000413601 ASB16-AS1Q495Z4 193 aa8.17□□□□□ -1.1
LIMS4-201ENST00000413601 Q5XG85 94 aa8.17□□□□□ -1.1
LIMS4-201ENST00000413601 FXYD2P54710 66 aa8.16□□□□□ -1.1
LIMS4-201ENST00000413601 TMEM238LA0A1B0GVL6 79 aa8.15□□□□□ -1.1
LIMS4-201ENST00000413601 A6NJY4 79 aa8.15□□□□□ -1.1
LIMS4-201ENST00000413601 OCIAD2Q56VL3 154 aa8.15□□□□□ -1.1
LIMS4-201ENST00000413601 C1orf195Q5TG92 126 aa8.15□□□□□ -1.1
LIMS4-201ENST00000413601 PRO1854Q9UHT4 67 aa8.15□□□□□ -1.1
LIMS4-201ENST00000413601 IGLV8-61A0A075B6I0 122 aa8.14□□□□□ -1.11
LIMS4-201ENST00000413601 H0YGX0 51 aa8.14□□□□□ -1.11
LIMS4-201ENST00000413601 SEC61BP60468 96 aaKnown RBP8.14□□□□□ -1.11
LIMS4-201ENST00000413601 FAM218AQ96MZ4 157 aa8.14□□□□□ -1.11
LIMS4-201ENST00000413601 C9orf92A6NGG3 77 aa8.13□□□□□ -1.11
LIMS4-201ENST00000413601 Q6JHZ5 121 aa8.13□□□□□ -1.11
LIMS4-201ENST00000413601 IGFL1Q6UW32 110 aa8.13□□□□□ -1.11
LIMS4-201ENST00000413601 PPDPFLQ8WWR9 84 aa8.13□□□□□ -1.11
LIMS4-201ENST00000413601 SNHG12Q9BXW3 62 aa8.13□□□□□ -1.11
LIMS4-201ENST00000413601 SNCGO76070 127 aa8.12□□□□□ -1.11
LIMS4-201ENST00000413601 CLEC2BQ92478 149 aa8.12□□□□□ -1.11
LIMS4-201ENST00000413601 TCL1BO95988 128 aa8.11□□□□□ -1.11
LIMS4-201ENST00000413601 HSD52Q0P140 79 aa8.11□□□□□ -1.11
LIMS4-201ENST00000413601 KRTAP4-1Q9BYQ7 146 aa8.1□□□□□ -1.11
LIMS4-201ENST00000413601 H3BUT2 72 aa8.09□□□□□ -1.11
LIMS4-201ENST00000413601 TRBV7-7A0A0K0K1E9 115 aa8.08□□□□□ -1.12
LIMS4-201ENST00000413601 TRIAP1O43715 76 aa8.08□□□□□ -1.12
LIMS4-201ENST00000413601 K7ERJ3 54 aa8.07□□□□□ -1.12
LIMS4-201ENST00000413601 UQCR10Q9UDW1 63 aa8.07□□□□□ -1.12
LIMS4-201ENST00000413601 A0A1B0GX51 115 aa8.05□□□□□ -1.12
LIMS4-201ENST00000413601 NDUFV3P56181 108 aaKnown RBP8.05□□□□□ -1.12
LIMS4-201ENST00000413601 KRTAP4-12Q9BQ66 201 aa8.04□□□□□ -1.12
LIMS4-201ENST00000413601 PSMB2P49721 201 aa8.03□□□□□ -1.12
LIMS4-201ENST00000413601 FAT4Q6V0I7 4981 aa8.02□□□□□ -1.13
LIMS4-201ENST00000413601 FABP2P12104 132 aa8.02□□□□□ -1.13
LIMS4-201ENST00000413601 PCOTHQ58A44 107 aa8.02□□□□□ -1.13
LIMS4-201ENST00000413601 H3BMG7 143 aa8.01□□□□□ -1.13
LIMS4-201ENST00000413601 GHRHP01286 108 aa8.01□□□□□ -1.13
LIMS4-201ENST00000413601 LCE3BQ5TA77 95 aa8.01□□□□□ -1.13
LIMS4-201ENST00000413601 DNAL4O96015 105 aa7.98□□□□□ -1.13
LIMS4-201ENST00000413601 COX6CP09669 75 aa7.98□□□□□ -1.13
LIMS4-201ENST00000413601 Q6Q795 121 aa7.98□□□□□ -1.13
LIMS4-201ENST00000413601 TEN1Q86WV5 123 aa7.98□□□□□ -1.13
LIMS4-201ENST00000413601 LST1O00453 97 aa7.97□□□□□ -1.13
LIMS4-201ENST00000413601 ORMDL1Q9P0S3 153 aa7.97□□□□□ -1.13
LIMS4-201ENST00000413601 RPL37P61927 97 aaKnown RBP7.95□□□□□ -1.14
LIMS4-201ENST00000413601 A0A087WSZ3 146 aa7.94□□□□□ -1.14
LIMS4-201ENST00000413601 A0A1B0GV72 72 aa7.94□□□□□ -1.14
LIMS4-201ENST00000413601 SS18L2Q9UHA2 77 aa7.94□□□□□ -1.14
LIMS4-201ENST00000413601 A0A1W2PNM2 257 aa7.92□□□□□ -1.14
LIMS4-201ENST00000413601 H3BQ85 93 aa7.92□□□□□ -1.14
LIMS4-201ENST00000413601 TMEM256-PLSCR3K7ERE1 68 aa7.92□□□□□ -1.14
LIMS4-201ENST00000413601 SCGB1C2P0DMR2 95 aa7.92□□□□□ -1.14
LIMS4-201ENST00000413601 ANKRD29Q8N6D5 301 aa7.91□□□□□ -1.14
LIMS4-201ENST00000413601 OBSCN-AS1Q96MR7 158 aa7.91□□□□□ -1.14
LIMS4-201ENST00000413601 TRACP01848 142 aa7.89□□□□□ -1.15
LIMS4-201ENST00000413601 KRTAP9-9Q9BYP9 154 aa7.89□□□□□ -1.15
LIMS4-201ENST00000413601 KRTAP9-4Q9BYQ2 154 aa7.89□□□□□ -1.15
LIMS4-201ENST00000413601 SMIM6P0DI80 62 aa7.88□□□□□ -1.15
LIMS4-201ENST00000413601 Q96NJ1 140 aa7.88□□□□□ -1.15
LIMS4-201ENST00000413601 UBE2V1Q13404 147 aa7.87□□□□□ -1.15
LIMS4-201ENST00000413601 M0R143 59 aa7.86□□□□□ -1.15
LIMS4-201ENST00000413601 TRBV7-4A0A0J9YYF1 115 aa7.85□□□□□ -1.15
LIMS4-201ENST00000413601 KRTAP19-2Q3LHN2 52 aa7.85□□□□□ -1.15
LIMS4-201ENST00000413601 CCKP06307 115 aa7.84□□□□□ -1.15
LIMS4-201ENST00000413601 KRTAP19-1Q8IUB9 90 aa7.84□□□□□ -1.15
LIMS4-201ENST00000413601 NAA38Q9BRA0 125 aaKnown RBP7.84□□□□□ -1.15
LIMS4-201ENST00000413601 Q75L30 129 aa7.83□□□□□ -1.16
LIMS4-201ENST00000413601 BAALC-AS2P0C853 105 aa7.81□□□□□ -1.16
LIMS4-201ENST00000413601 ATP11AUNQ6ZP68 121 aa7.81□□□□□ -1.16
LIMS4-201ENST00000413601 SIGMAR1Q99720 223 aa7.81□□□□□ -1.16
LIMS4-201ENST00000413601 RBM3P98179 157 aaKnown RBP7.8□□□□□ -1.16
LIMS4-201ENST00000413601 KRTAP4-8A0A0G2JLE6 195 aa7.79□□□□□ -1.16
LIMS4-201ENST00000413601 IGKV4-1P06312 121 aa7.79□□□□□ -1.16
LIMS4-201ENST00000413601 DSCR10P59022 87 aa7.79□□□□□ -1.16
LIMS4-201ENST00000413601 VPS25Q9BRG1 176 aa7.79□□□□□ -1.16
LIMS4-201ENST00000413601 TSTD3H0UI37 97 aa7.78□□□□□ -1.16
LIMS4-201ENST00000413601 ATXN8Q156A1 80 aa7.78□□□□□ -1.16
LIMS4-201ENST00000413601 DEFB116Q30KQ4 102 aa7.78□□□□□ -1.16
LIMS4-201ENST00000413601 LOC105371267A0A1B0GV96 52 aa7.77□□□□□ -1.17
LIMS4-201ENST00000413601 C20orf166-AS1Q96NR2 134 aa7.77□□□□□ -1.17
LIMS4-201ENST00000413601 DSCR8Q96T75 97 aa7.77□□□□□ -1.17
LIMS4-201ENST00000413601 LINC00472Q9H8W2 130 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 5.8 ms