RNA–Protein interactions for RNA: ENST00000413517.1

HERPUD2-203, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-203ENST00000413517 ATOH7Q8N100 152 aa4.93□□□□□ -1.62
HERPUD2-203ENST00000413517 LINC00308Q8TCZ7 52 aa4.93□□□□□ -1.62
HERPUD2-203ENST00000413517 RETNLBQ9BQ08 111 aa4.93□□□□□ -1.62
HERPUD2-203ENST00000413517 TAX1BP3O14907 124 aa4.92□□□□□ -1.62
HERPUD2-203ENST00000413517 TIMM17BO60830 172 aa4.92□□□□□ -1.62
HERPUD2-203ENST00000413517 BVES-AS1Q5T3Y7 98 aa4.92□□□□□ -1.62
HERPUD2-203ENST00000413517 Q6ZRX8 168 aa4.92□□□□□ -1.62
HERPUD2-203ENST00000413517 KRTAP4-9Q9BYQ8 210 aa4.92□□□□□ -1.62
HERPUD2-203ENST00000413517 LINC00483Q53H64 154 aa4.91□□□□□ -1.62
HERPUD2-203ENST00000413517 TRAV23DV6A0A075B6W5 121 aa4.9□□□□□ -1.63
HERPUD2-203ENST00000413517 S100A7L2Q5SY68 101 aa4.9□□□□□ -1.63
HERPUD2-203ENST00000413517 PCP2Q8IVA1 136 aa4.9□□□□□ -1.63
HERPUD2-203ENST00000413517 SPANXCQ9NY87 97 aa4.9□□□□□ -1.63
HERPUD2-203ENST00000413517 ZNF73O43830 326 aaPredicted RBP4.89□□□□□ -1.63
HERPUD2-203ENST00000413517 ZNF706Q9Y5V0 76 aaPredicted RBP4.89□□□□□ -1.63
HERPUD2-203ENST00000413517 K7EP34 96 aa4.88□□□□□ -1.63
HERPUD2-203ENST00000413517 COX8AP10176 69 aa4.88□□□□□ -1.63
HERPUD2-203ENST00000413517 HSD52Q0P140 79 aa4.88□□□□□ -1.63
HERPUD2-203ENST00000413517 Q8NBF4 154 aa4.88□□□□□ -1.63
HERPUD2-203ENST00000413517 SPANXDQ9BXN6 97 aa4.88□□□□□ -1.63
HERPUD2-203ENST00000413517 RNF213Q63HN8 5207 aa4.88□□□□□ -1.63
HERPUD2-203ENST00000413517 FABP2P12104 132 aa4.87□□□□□ -1.63
HERPUD2-203ENST00000413517 ST20-AS1Q8NBB2 130 aa4.87□□□□□ -1.63
HERPUD2-203ENST00000413517 SIGMAR1Q99720 223 aa4.87□□□□□ -1.63
HERPUD2-203ENST00000413517 MOBPQ13875 183 aa4.86□□□□□ -1.63
HERPUD2-203ENST00000413517 OR13C6PQ8NH95 151 aa4.86□□□□□ -1.63
HERPUD2-203ENST00000413517 IGKV2-30P06310 120 aa4.85□□□□□ -1.63
HERPUD2-203ENST00000413517 SCGB1D4Q6XE38 83 aa4.85□□□□□ -1.63
HERPUD2-203ENST00000413517 C6orf99Q4VX62 202 aa4.84□□□□□ -1.63
HERPUD2-203ENST00000413517 Q6ZVH6 145 aa4.84□□□□□ -1.63
HERPUD2-203ENST00000413517 MUSTN1Q8IVN3 82 aa4.84□□□□□ -1.63
HERPUD2-203ENST00000413517 SPCS1Q9Y6A9 102 aa4.84□□□□□ -1.63
HERPUD2-203ENST00000413517 IGLV7-46A0A075B6I9 117 aa4.83□□□□□ -1.64
HERPUD2-203ENST00000413517 A0A1W2PPM0 123 aa4.83□□□□□ -1.64
HERPUD2-203ENST00000413517 IFITM1P13164 125 aa4.83□□□□□ -1.64
HERPUD2-203ENST00000413517 ELOF1P60002 83 aaKnown RBP4.83□□□□□ -1.64
HERPUD2-203ENST00000413517 SPAG11AQ6PDA7 123 aa4.83□□□□□ -1.64
HERPUD2-203ENST00000413517 F8W1H4 67 aa4.82□□□□□ -1.64
HERPUD2-203ENST00000413517 H3BUT2 72 aa4.82□□□□□ -1.64
HERPUD2-203ENST00000413517 SPRR1BP22528 89 aa4.82□□□□□ -1.64
HERPUD2-203ENST00000413517 TPRXLQ17RH7 258 aa4.82□□□□□ -1.64
HERPUD2-203ENST00000413517 HIGD1BQ9P298 99 aa4.82□□□□□ -1.64
HERPUD2-203ENST00000413517 V9GYY9 64 aa4.82□□□□□ -1.64
HERPUD2-203ENST00000413517 COX7BP24311 80 aa4.81□□□□□ -1.64
HERPUD2-203ENST00000413517 C2orf91Q6ZV80 131 aa4.81□□□□□ -1.64
HERPUD2-203ENST00000413517 SSBP3-AS1Q7Z2R9 100 aa4.81□□□□□ -1.64
HERPUD2-203ENST00000413517 SPINK1P00995 79 aa4.8□□□□□ -1.64
HERPUD2-203ENST00000413517 TAL2Q16559 108 aa4.8□□□□□ -1.64
HERPUD2-203ENST00000413517 C9orf153Q5TBE3 101 aa4.8□□□□□ -1.64
HERPUD2-203ENST00000413517 LYRM7Q5U5X0 104 aa4.8□□□□□ -1.64
HERPUD2-203ENST00000413517 Q8N377 158 aa4.8□□□□□ -1.64
HERPUD2-203ENST00000413517 KRTAP4-2Q9BYR5 136 aa4.8□□□□□ -1.64
HERPUD2-203ENST00000413517 DHRS4-AS1Q9P1J3 65 aa4.8□□□□□ -1.64
HERPUD2-203ENST00000413517 KRTAP13-3Q3SY46 172 aa4.79□□□□□ -1.64
HERPUD2-203ENST00000413517 NOTCH2NLQ7Z3S9 236 aa4.79□□□□□ -1.64
HERPUD2-203ENST00000413517 SMIM11BQ8TCY0 68 aa4.79□□□□□ -1.64
HERPUD2-203ENST00000413517 HIST1H4GQ99525 98 aa4.79□□□□□ -1.64
HERPUD2-203ENST00000413517 TRBV7-6A0A0J9YX20 115 aa4.78□□□□□ -1.64
HERPUD2-203ENST00000413517 RPS29P62273 56 aaKnown RBP4.78□□□□□ -1.64
HERPUD2-203ENST00000413517 FP248Q71RG6 208 aaPredicted RBP4.78□□□□□ -1.64
HERPUD2-203ENST00000413517 COPS9Q8WXC6 57 aa4.78□□□□□ -1.64
HERPUD2-203ENST00000413517 Q1RN00 199 aa4.77□□□□□ -1.65
HERPUD2-203ENST00000413517 IGLV5-48A0A075B6I7 105 aa4.76□□□□□ -1.65
HERPUD2-203ENST00000413517 TRAV13-2A0A0B4J235 113 aa4.76□□□□□ -1.65
HERPUD2-203ENST00000413517 A0A0G2JQZ4 141 aa4.76□□□□□ -1.65
HERPUD2-203ENST00000413517 C5orf47Q569G3 176 aa4.76□□□□□ -1.65
HERPUD2-203ENST00000413517 DEFB105AQ8NG35 78 aa4.76□□□□□ -1.65
HERPUD2-203ENST00000413517 KRTAP4-11Q9BYQ6 195 aa4.76□□□□□ -1.65
HERPUD2-203ENST00000413517 LCE5AQ5TCM9 118 aa4.75□□□□□ -1.65
HERPUD2-203ENST00000413517 RAB37Q96AX2 223 aa4.75□□□□□ -1.65
HERPUD2-203ENST00000413517 TEX49A0A1B0GTD5 131 aa4.74□□□□□ -1.65
HERPUD2-203ENST00000413517 HRCT1Q6UXD1 115 aa4.74□□□□□ -1.65
HERPUD2-203ENST00000413517 CEND1Q8N111 149 aa4.74□□□□□ -1.65
HERPUD2-203ENST00000413517 KRTAP9-3Q9BYQ3 159 aa4.74□□□□□ -1.65
HERPUD2-203ENST00000413517 LAMTOR3Q9UHA4 124 aa4.74□□□□□ -1.65
HERPUD2-203ENST00000413517 MUC2Q02817 5179 aa4.74□□□□□ -1.65
HERPUD2-203ENST00000413517 H3BMG7 143 aa4.73□□□□□ -1.65
HERPUD2-203ENST00000413517 SLC25A20O43772 301 aa4.73□□□□□ -1.65
HERPUD2-203ENST00000413517 KRTAP4-1Q9BYQ7 146 aa4.73□□□□□ -1.65
HERPUD2-203ENST00000413517 LINC00575Q6W349 94 aa4.72□□□□□ -1.65
HERPUD2-203ENST00000413517 PPDPFLQ8WWR9 84 aa4.71□□□□□ -1.66
HERPUD2-203ENST00000413517 NHP2Q9NX24 153 aaKnown RBP4.71□□□□□ -1.66
HERPUD2-203ENST00000413517 TRBV20-1A0A075B6N2 111 aa4.7□□□□□ -1.66
HERPUD2-203ENST00000413517 H7C2G1 150 aa4.7□□□□□ -1.66
HERPUD2-203ENST00000413517 CFC1BP0CG36 223 aa4.7□□□□□ -1.66
HERPUD2-203ENST00000413517 CFC1P0CG37 223 aa4.7□□□□□ -1.66
HERPUD2-203ENST00000413517 FXYD2P54710 66 aa4.7□□□□□ -1.66
HERPUD2-203ENST00000413517 Q6ZQY7 126 aa4.7□□□□□ -1.66
HERPUD2-203ENST00000413517 MUC17Q685J3 4493 aa4.7□□□□□ -1.66
HERPUD2-203ENST00000413517 CD164Q04900 197 aa4.69□□□□□ -1.66
HERPUD2-203ENST00000413517 ETDBQ3ZM63 59 aa4.69□□□□□ -1.66
HERPUD2-203ENST00000413517 ASB16-AS1Q495Z4 193 aa4.69□□□□□ -1.66
HERPUD2-203ENST00000413517 NAA38Q9BRA0 125 aaKnown RBP4.69□□□□□ -1.66
HERPUD2-203ENST00000413517 ANAPC13Q9BS18 74 aa4.69□□□□□ -1.66
HERPUD2-203ENST00000413517 hADV29S1A0JD25 119 aa4.68□□□□□ -1.66
HERPUD2-203ENST00000413517 LIMD2Q9BT23 127 aa4.68□□□□□ -1.66
HERPUD2-203ENST00000413517 CXCL6P80162 114 aa4.67□□□□□ -1.66
HERPUD2-203ENST00000413517 Q5XG85 94 aa4.67□□□□□ -1.66
HERPUD2-203ENST00000413517 Q6Q795 121 aa4.67□□□□□ -1.66
HERPUD2-203ENST00000413517 TEN1Q86WV5 123 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms