RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 KRTAP10-1P60331 282 aa11.04□□□□□ -0.64
HCG11-201ENST00000411553 STAB1Q9NY15 2570 aa11.01□□□□□ -0.65
HCG11-201ENST00000411553 KRTAP10-2P60368 255 aa10.99□□□□□ -0.65
HCG11-201ENST00000411553 KRTAP26-1Q6PEX3 210 aa10.99□□□□□ -0.65
HCG11-201ENST00000411553 CFAP46Q8IYW2 2715 aa10.97□□□□□ -0.65
HCG11-201ENST00000411553 Q5VV11 94 aa10.91□□□□□ -0.66
HCG11-201ENST00000411553 PRAC1Q96KF2 57 aa10.9□□□□□ -0.66
HCG11-201ENST00000411553 FP248Q71RG6 208 aaPredicted RBP10.89□□□□□ -0.67
HCG11-201ENST00000411553 RPL37P61927 97 aaKnown RBP10.88□□□□□ -0.67
HCG11-201ENST00000411553 M0QZ58 72 aa10.88□□□□□ -0.67
HCG11-201ENST00000411553 Q5XG85 94 aa10.88□□□□□ -0.67
HCG11-201ENST00000411553 CYSTM1Q9H1C7 97 aa10.87□□□□□ -0.67
HCG11-201ENST00000411553 DNAH12Q6ZR08 3092 aa10.83□□□□□ -0.68
HCG11-201ENST00000411553 FLG2Q5D862 2391 aaPredicted RBP10.83□□□□□ -0.68
HCG11-201ENST00000411553 OXTP01178 125 aa10.82□□□□□ -0.68
HCG11-201ENST00000411553 H1FX-AS1Q4G0G2 97 aa10.81□□□□□ -0.68
HCG11-201ENST00000411553 ROMO1P60602 79 aa10.8□□□□□ -0.68
HCG11-201ENST00000411553 A0A0A0MQY5 61 aa10.79□□□□□ -0.68
HCG11-201ENST00000411553 PANO1I0J062 215 aa10.78□□□□□ -0.68
HCG11-201ENST00000411553 Q6ZR54 194 aa10.78□□□□□ -0.68
HCG11-201ENST00000411553 PLAC4Q8WY50 150 aa10.77□□□□□ -0.69
HCG11-201ENST00000411553 CEP350Q5VT06 3117 aa10.76□□□□□ -0.69
HCG11-201ENST00000411553 KRTAP4-16G5E9R7 235 aaPredicted RBP10.74□□□□□ -0.69
HCG11-201ENST00000411553 ADM2Q7Z4H4 148 aa10.74□□□□□ -0.69
HCG11-201ENST00000411553 NBEAL1Q6ZS30 2694 aa10.74□□□□□ -0.69
HCG11-201ENST00000411553 AKAP13Q12802 2813 aa10.74□□□□□ -0.69
HCG11-201ENST00000411553 CENPEQ02224 2701 aa10.73□□□□□ -0.69
HCG11-201ENST00000411553 TEX15Q9BXT5 2789 aa10.71□□□□□ -0.69
HCG11-201ENST00000411553 A0A087X002 238 aa10.71□□□□□ -0.69
HCG11-201ENST00000411553 TEP1Q99973 2627 aaKnown RBP10.7□□□□□ -0.7
HCG11-201ENST00000411553 CHD6Q8TD26 2715 aa10.69□□□□□ -0.7
HCG11-201ENST00000411553 KRTAP29-1A8MX34 341 aaPredicted RBP10.64□□□□□ -0.71
HCG11-201ENST00000411553 SPATA8Q6RVD6 105 aa10.64□□□□□ -0.71
HCG11-201ENST00000411553 SETXQ7Z333 2677 aaKnown RBP10.64□□□□□ -0.71
HCG11-201ENST00000411553 C5orf42Q9H799 3197 aa10.62□□□□□ -0.71
HCG11-201ENST00000411553 COL6A5A8TX70 2615 aa10.57□□□□□ -0.72
HCG11-201ENST00000411553 CHD7Q9P2D1 2997 aa10.55□□□□□ -0.72
HCG11-201ENST00000411553 DMBT1Q9UGM3 2413 aaPredicted RBP10.55□□□□□ -0.72
HCG11-201ENST00000411553 RPS29P62273 56 aaKnown RBP10.55□□□□□ -0.72
HCG11-201ENST00000411553 UNC79Q9P2D8 2635 aa10.54□□□□□ -0.72
HCG11-201ENST00000411553 NOTCH2NLQ7Z3S9 236 aa10.53□□□□□ -0.72
HCG11-201ENST00000411553 ASB16-AS1Q495Z4 193 aa10.53□□□□□ -0.72
HCG11-201ENST00000411553 H3BS24 57 aa10.52□□□□□ -0.73
HCG11-201ENST00000411553 Q6ZRN7 208 aaPredicted RBP10.48□□□□□ -0.73
HCG11-201ENST00000411553 GCN1Q92616 2671 aaKnown RBP10.47□□□□□ -0.73
HCG11-201ENST00000411553 KRTAP11-1Q8IUC1 163 aa10.47□□□□□ -0.73
HCG11-201ENST00000411553 NOTCH1P46531 2555 aa10.45□□□□□ -0.74
HCG11-201ENST00000411553 A8MUU9 505 aa10.41□□□□□ -0.74
HCG11-201ENST00000411553 UTRNP46939 3433 aa10.4□□□□□ -0.75
HCG11-201ENST00000411553 MGAQ8IWI9 3026 aa10.38□□□□□ -0.75
HCG11-201ENST00000411553 STAB2Q8WWQ8 2551 aa10.37□□□□□ -0.75
HCG11-201ENST00000411553 KRTAP13-2Q52LG2 175 aa10.35□□□□□ -0.75
HCG11-201ENST00000411553 CHD9Q3L8U1 2897 aa10.35□□□□□ -0.75
HCG11-201ENST00000411553 PCNTO95613 3336 aa10.35□□□□□ -0.75
HCG11-201ENST00000411553 ZNF292O60281 2723 aa10.34□□□□□ -0.75
HCG11-201ENST00000411553 KRTAP7-1Q8IUC3 87 aa10.33□□□□□ -0.76
HCG11-201ENST00000411553 BAHCC1Q9P281 2608 aa10.32□□□□□ -0.76
HCG11-201ENST00000411553 C20orf166-AS1Q96NR2 134 aa10.31□□□□□ -0.76
HCG11-201ENST00000411553 A8MU10 97 aa10.3□□□□□ -0.76
HCG11-201ENST00000411553 KRTAP13-1Q8IUC0 172 aa10.27□□□□□ -0.76
HCG11-201ENST00000411553 CFAP54Q96N23 3096 aa10.27□□□□□ -0.77
HCG11-201ENST00000411553 NBEAL2Q6ZNJ1 2754 aa10.25□□□□□ -0.77
HCG11-201ENST00000411553 KRTAP25-1Q3LHN0 102 aa10.2□□□□□ -0.78
HCG11-201ENST00000411553 A0A0C4DFX4 3053 aa10.2□□□□□ -0.78
HCG11-201ENST00000411553 UBR5O95071 2799 aaPredicted RBP10.19□□□□□ -0.78
HCG11-201ENST00000411553 IGSF10Q6WRI0 2623 aa10.18□□□□□ -0.78
HCG11-201ENST00000411553 NSD1Q96L73 2696 aaPredicted RBP10.17□□□□□ -0.78
HCG11-201ENST00000411553 KRTAP21-3Q3LHN1 58 aa10.13□□□□□ -0.79
HCG11-201ENST00000411553 MAP1AP78559 2803 aaPredicted RBP10.12□□□□□ -0.79
HCG11-201ENST00000411553 ITPR2Q14571 2701 aa10.11□□□□□ -0.79
HCG11-201ENST00000411553 A6NN06 94 aa10.11□□□□□ -0.79
HCG11-201ENST00000411553 TNP1P09430 55 aa10.1□□□□□ -0.79
HCG11-201ENST00000411553 RANBP2P49792 3224 aaKnown RBP10.09□□□□□ -0.79
HCG11-201ENST00000411553 DSPP15924 2871 aaKnown RBP10.08□□□□□ -0.8
HCG11-201ENST00000411553 TRANK1O15050 2925 aa10.07□□□□□ -0.8
HCG11-201ENST00000411553 KRTAP16-1A8MUX0 517 aa10.04□□□□□ -0.8
HCG11-201ENST00000411553 HTTP42858 3142 aa10.04□□□□□ -0.8
HCG11-201ENST00000411553 WDFY4Q6ZS81 3184 aa10.02□□□□□ -0.81
HCG11-201ENST00000411553 FRYQ5TBA9 3013 aa10.01□□□□□ -0.81
HCG11-201ENST00000411553 ITPR1Q14643 2758 aa9.91□□□□□ -0.82
HCG11-201ENST00000411553 KMT2BQ9UMN6 2715 aaPredicted RBP9.9□□□□□ -0.82
HCG11-201ENST00000411553 LAMA3Q16787 3333 aa9.89□□□□□ -0.83
HCG11-201ENST00000411553 C10orf95Q9H7T3 257 aa9.89□□□□□ -0.83
HCG11-201ENST00000411553 PRUNE2Q8WUY3 3088 aa9.88□□□□□ -0.83
HCG11-201ENST00000411553 NDUFAF8A1L188 74 aa9.87□□□□□ -0.83
HCG11-201ENST00000411553 MKI67P46013 3256 aaKnown RBP9.86□□□□□ -0.83
HCG11-201ENST00000411553 XP32Q5T750 250 aa9.85□□□□□ -0.83
HCG11-201ENST00000411553 KRTAP10-8P60410 259 aa9.82□□□□□ -0.84
HCG11-201ENST00000411553 TRIOO75962 3097 aa9.82□□□□□ -0.84
HCG11-201ENST00000411553 KRTAP1-4P0C5Y4 121 aa9.8□□□□□ -0.84
HCG11-201ENST00000411553 LAMA2P24043 3122 aaKnown RBP9.79□□□□□ -0.84
HCG11-201ENST00000411553 A0A1B0GVY2 172 aa9.79□□□□□ -0.84
HCG11-201ENST00000411553 PP632Q6XCG6 107 aa9.76□□□□□ -0.85
HCG11-201ENST00000411553 UTP20O75691 2785 aaKnown RBP9.74□□□□□ -0.85
HCG11-201ENST00000411553 APCP25054 2843 aa9.73□□□□□ -0.85
HCG11-201ENST00000411553 TENM4Q6N022 2769 aa9.7□□□□□ -0.86
HCG11-201ENST00000411553 TACC2O95359 2948 aa9.69□□□□□ -0.86
HCG11-201ENST00000411553 TPRXLQ17RH7 258 aa9.69□□□□□ -0.86
HCG11-201ENST00000411553 HIVEP1P15822 2718 aa9.68□□□□□ -0.86
HCG11-201ENST00000411553 BRCA2P51587 3418 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms