RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 H3BQ15 152 aa-1.95□□□□□ -2.72
RNU4-55P-201ENST00000410731 MUSTN1Q8IVN3 82 aa-1.95□□□□□ -2.72
RNU4-55P-201ENST00000410731 PAIP2BQ9ULR5 123 aaKnown RBP-1.95□□□□□ -2.72
RNU4-55P-201ENST00000410731 ATP7BP35670 1465 aa-1.95□□□□□ -2.72
RNU4-55P-201ENST00000410731 NESP48681 1621 aa-1.95□□□□□ -2.72
RNU4-55P-201ENST00000410731 UQCRHP07919 91 aa-1.96□□□□□ -2.72
RNU4-55P-201ENST00000410731 IFI6P09912 130 aa-1.96□□□□□ -2.72
RNU4-55P-201ENST00000410731 ALKAL2Q6UX46 152 aa-1.96□□□□□ -2.72
RNU4-55P-201ENST00000410731 WFDC9Q8NEX5 89 aa-1.96□□□□□ -2.72
RNU4-55P-201ENST00000410731 GAFA1Q96PS6 74 aa-1.96□□□□□ -2.72
RNU4-55P-201ENST00000410731 MYH4Q9Y623 1939 aa-1.96□□□□□ -2.72
RNU4-55P-201ENST00000410731 LEPROTL1O95214 131 aa-1.97□□□□□ -2.72
RNU4-55P-201ENST00000410731 HMGN3Q15651 99 aa-1.97□□□□□ -2.72
RNU4-55P-201ENST00000410731 SVBPQ8N300 66 aa-1.97□□□□□ -2.72
RNU4-55P-201ENST00000410731 TRGV9Q99603 122 aa-1.97□□□□□ -2.72
RNU4-55P-201ENST00000410731 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.97□□□□□ -2.72
RNU4-55P-201ENST00000410731 MLH3Q9UHC1 1453 aa-1.97□□□□□ -2.72
RNU4-55P-201ENST00000410731 RAPGEF2Q9Y4G8 1499 aa-1.97□□□□□ -2.72
RNU4-55P-201ENST00000410731 TOGARAM1Q9Y4F4 1720 aa-1.97□□□□□ -2.73
RNU4-55P-201ENST00000410731 ANKRD36BQ8N2N9 1353 aa-1.98□□□□□ -2.73
RNU4-55P-201ENST00000410731 CC2D2AQ9P2K1 1620 aa-1.98□□□□□ -2.73
RNU4-55P-201ENST00000410731 NDUFC1O43677 76 aa-1.98□□□□□ -2.73
RNU4-55P-201ENST00000410731 MPC2O95563 127 aa-1.98□□□□□ -2.73
RNU4-55P-201ENST00000410731 RGPD1P0DJD0 1748 aa-1.98□□□□□ -2.73
RNU4-55P-201ENST00000410731 NWD1Q149M9 1564 aa-1.98□□□□□ -2.73
RNU4-55P-201ENST00000410731 FYCO1Q9BQS8 1478 aa-1.99□□□□□ -2.73
RNU4-55P-201ENST00000410731 MYO15AQ9UKN7 3530 aa-1.99□□□□□ -2.73
RNU4-55P-201ENST00000410731 IGLV5-48A0A075B6I7 105 aa-1.99□□□□□ -2.73
RNU4-55P-201ENST00000410731 SNAPC5O75971 98 aa-1.99□□□□□ -2.73
RNU4-55P-201ENST00000410731 ETDBQ3ZM63 59 aa-1.99□□□□□ -2.73
RNU4-55P-201ENST00000410731 SPHKAPQ2M3C7 1700 aa-2□□□□□ -2.73
RNU4-55P-201ENST00000410731 SUPT6HQ7KZ85 1726 aaKnown RBP-2□□□□□ -2.73
RNU4-55P-201ENST00000410731 MYOM2P54296 1465 aa-2□□□□□ -2.73
RNU4-55P-201ENST00000410731 NRXN1Q9ULB1 1477 aa-2□□□□□ -2.73
RNU4-55P-201ENST00000410731 CRYBG3Q68DQ2 2970 aa-2□□□□□ -2.73
RNU4-55P-201ENST00000410731 IQCF6A8MYZ5 107 aa-2□□□□□ -2.73
RNU4-55P-201ENST00000410731 TEX14Q8IWB6 1497 aa-2.01□□□□□ -2.73
RNU4-55P-201ENST00000410731 IER3IP1Q9Y5U9 82 aa-2.01□□□□□ -2.73
RNU4-55P-201ENST00000410731 ABCA3Q99758 1704 aa-2.01□□□□□ -2.73
RNU4-55P-201ENST00000410731 PARP4Q9UKK3 1724 aaKnown RBP-2.01□□□□□ -2.73
RNU4-55P-201ENST00000410731 CFAP54Q96N23 3096 aa-2.02□□□□□ -2.73
RNU4-55P-201ENST00000410731 NRKQ7Z2Y5 1582 aa-2.02□□□□□ -2.73
RNU4-55P-201ENST00000410731 POLR1AO95602 1720 aaPredicted RBP-2.02□□□□□ -2.73
RNU4-55P-201ENST00000410731 VPS13CQ709C8 3753 aa-2.02□□□□□ -2.73
RNU4-55P-201ENST00000410731 LCE6AA0A183 80 aa-2.02□□□□□ -2.73
RNU4-55P-201ENST00000410731 A0A1B0GUT8 65 aa-2.02□□□□□ -2.73
RNU4-55P-201ENST00000410731 ZNF720Q7Z2F6 126 aa-2.02□□□□□ -2.73
RNU4-55P-201ENST00000410731 BAZ1AQ9NRL2 1556 aaPredicted RBP-2.02□□□□□ -2.73
RNU4-55P-201ENST00000410731 WDFY3Q8IZQ1 3526 aa-2.03□□□□□ -2.73
RNU4-55P-201ENST00000410731 DEFB4AO15263 64 aa-2.04□□□□□ -2.74
RNU4-55P-201ENST00000410731 DOT1LQ8TEK3 1739 aa-2.04□□□□□ -2.74
RNU4-55P-201ENST00000410731 LTN1O94822 1766 aa-2.05□□□□□ -2.74
RNU4-55P-201ENST00000410731 LY75O60449 1722 aa-2.05□□□□□ -2.74
RNU4-55P-201ENST00000410731 PRDM15P57071 1507 aaPredicted RBP-2.05□□□□□ -2.74
RNU4-55P-201ENST00000410731 TRAV21A0A0B4J279 112 aa-2.05□□□□□ -2.74
RNU4-55P-201ENST00000410731 WT1-ASQ06250 92 aa-2.05□□□□□ -2.74
RNU4-55P-201ENST00000410731 DMDP11532 3685 aa-2.06□□□□□ -2.74
RNU4-55P-201ENST00000410731 PLIN4Q96Q06 1357 aa-2.06□□□□□ -2.74
RNU4-55P-201ENST00000410731 LINC01546A6NGU7 62 aa-2.06□□□□□ -2.74
RNU4-55P-201ENST00000410731 GNGT2O14610 69 aa-2.06□□□□□ -2.74
RNU4-55P-201ENST00000410731 PPP3R1P63098 170 aa-2.06□□□□□ -2.74
RNU4-55P-201ENST00000410731 GNG4P50150 75 aa-2.07□□□□□ -2.74
RNU4-55P-201ENST00000410731 PLGLAQ15195 96 aa-2.07□□□□□ -2.74
RNU4-55P-201ENST00000410731 SPEGQ15772 3267 aa-2.07□□□□□ -2.74
RNU4-55P-201ENST00000410731 EIF4G3O43432 1585 aaKnown RBP-2.07□□□□□ -2.74
RNU4-55P-201ENST00000410731 MAST1Q9Y2H9 1570 aa-2.07□□□□□ -2.74
RNU4-55P-201ENST00000410731 NDUFA2O43678 99 aa-2.08□□□□□ -2.74
RNU4-55P-201ENST00000410731 CYB5AP00167 134 aa-2.08□□□□□ -2.74
RNU4-55P-201ENST00000410731 ACYP1P07311 99 aa-2.08□□□□□ -2.74
RNU4-55P-201ENST00000410731 ITSN2Q9NZM3 1697 aa-2.09□□□□□ -2.74
RNU4-55P-201ENST00000410731 ROCK2O75116 1388 aaKnown RBP-2.09□□□□□ -2.74
RNU4-55P-201ENST00000410731 ATOX1O00244 68 aa-2.09□□□□□ -2.74
RNU4-55P-201ENST00000410731 CCDC58Q4VC31 144 aa-2.09□□□□□ -2.74
RNU4-55P-201ENST00000410731 PMCHL2Q9BQD1 86 aa-2.09□□□□□ -2.74
RNU4-55P-201ENST00000410731 DDX60LQ5H9U9 1706 aaKnown RBP-2.09□□□□□ -2.74
RNU4-55P-201ENST00000410731 NALCNQ8IZF0 1738 aa-2.09□□□□□ -2.74
RNU4-55P-201ENST00000410731 PZPP20742 1482 aa-2.09□□□□□ -2.74
RNU4-55P-201ENST00000410731 UQCRHLA0A096LP55 91 aa-2.1□□□□□ -2.75
RNU4-55P-201ENST00000410731 NOP10Q9NPE3 64 aaKnown RBP-2.1□□□□□ -2.75
RNU4-55P-201ENST00000410731 CLTCQ00610 1675 aaKnown RBP-2.1□□□□□ -2.75
RNU4-55P-201ENST00000410731 LOC105371267A0A1B0GV96 52 aa-2.12□□□□□ -2.75
RNU4-55P-201ENST00000410731 ITSN1Q15811 1721 aa-2.12□□□□□ -2.75
RNU4-55P-201ENST00000410731 KIAA0586Q9BVV6 1533 aa-2.12□□□□□ -2.75
RNU4-55P-201ENST00000410731 KIF1AQ12756 1690 aa-2.12□□□□□ -2.75
RNU4-55P-201ENST00000410731 SMARCA2P51531 1590 aa-2.13□□□□□ -2.75
RNU4-55P-201ENST00000410731 DIP2BQ9P265 1576 aa-2.13□□□□□ -2.75
RNU4-55P-201ENST00000410731 CORTO00230 105 aa-2.13□□□□□ -2.75
RNU4-55P-201ENST00000410731 HMGN2P05204 90 aaKnown RBP-2.13□□□□□ -2.75
RNU4-55P-201ENST00000410731 S100PP25815 95 aa-2.13□□□□□ -2.75
RNU4-55P-201ENST00000410731 CCNB3Q8WWL7 1395 aa-2.13□□□□□ -2.75
RNU4-55P-201ENST00000410731 THOC2Q8NI27 1593 aaKnown RBP-2.14□□□□□ -2.75
RNU4-55P-201ENST00000410731 NDUFB1O75438 58 aa-2.14□□□□□ -2.75
RNU4-55P-201ENST00000410731 S100A1P23297 94 aa-2.14□□□□□ -2.75
RNU4-55P-201ENST00000410731 RPS27P42677 84 aaKnown RBP-2.14□□□□□ -2.75
RNU4-55P-201ENST00000410731 KRTAP19-6Q3LI70 58 aa-2.14□□□□□ -2.75
RNU4-55P-201ENST00000410731 COL5A1-AS1Q5SY13 56 aa-2.14□□□□□ -2.75
RNU4-55P-201ENST00000410731 BVES-AS1Q5T3Y7 98 aa-2.14□□□□□ -2.75
RNU4-55P-201ENST00000410731 RPL13AP3Q6NVV1 102 aa-2.14□□□□□ -2.75
RNU4-55P-201ENST00000410731 RPS27LQ71UM5 84 aaKnown RBP-2.14□□□□□ -2.75
RNU4-55P-201ENST00000410731 TSC22D3Q99576 134 aa-2.14□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms