RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 PHF5AQ7RTV0 110 aaKnown RBP3.63□□□□□ -1.83
CLK1-202ENST00000409403 HIGD2AQ9BW72 106 aa3.63□□□□□ -1.83
CLK1-202ENST00000409403 ALMS1Q8TCU4 4167 aa3.62□□□□□ -1.83
CLK1-202ENST00000409403 M0R378 163 aa3.62□□□□□ -1.83
CLK1-202ENST00000409403 PSCAO43653 123 aa3.62□□□□□ -1.83
CLK1-202ENST00000409403 KRTAP10-3P60369 221 aa3.62□□□□□ -1.83
CLK1-202ENST00000409403 SYCNQ0VAF6 134 aa3.62□□□□□ -1.83
CLK1-202ENST00000409403 C11orf71Q6IPW1 123 aa3.62□□□□□ -1.83
CLK1-202ENST00000409403 Q6ZQY7 126 aa3.62□□□□□ -1.83
CLK1-202ENST00000409403 LINC00269Q8N2A0 174 aa3.62□□□□□ -1.83
CLK1-202ENST00000409403 DIRC1Q969H9 104 aa3.62□□□□□ -1.83
CLK1-202ENST00000409403 Q9UF83 564 aa3.62□□□□□ -1.83
CLK1-202ENST00000409403 DMBT1Q9UGM3 2413 aaPredicted RBP3.62□□□□□ -1.83
CLK1-202ENST00000409403 TRGV1A0A0A0MS02 117 aa3.62□□□□□ -1.83
CLK1-202ENST00000409403 A6NDX4 124 aa3.62□□□□□ -1.83
CLK1-202ENST00000409403 PSPHP1O15172 72 aa3.62□□□□□ -1.83
CLK1-202ENST00000409403 A0A0J9YWU9 116 aa3.61□□□□□ -1.83
CLK1-202ENST00000409403 LINC00959A0A1B0GUT2 108 aa3.61□□□□□ -1.83
CLK1-202ENST00000409403 ETDCA0A1B0GVM5 59 aa3.61□□□□□ -1.83
CLK1-202ENST00000409403 DEFB131AP59861 70 aa3.61□□□□□ -1.83
CLK1-202ENST00000409403 HIGD2BQ4VC39 106 aa3.61□□□□□ -1.83
CLK1-202ENST00000409403 C7orf65Q6ZTY9 151 aa3.61□□□□□ -1.83
CLK1-202ENST00000409403 SCXQ7RTU7 201 aa3.61□□□□□ -1.83
CLK1-202ENST00000409403 ZNF73O43830 326 aaPredicted RBP3.6□□□□□ -1.83
CLK1-202ENST00000409403 APOC4P55056 127 aa3.6□□□□□ -1.83
CLK1-202ENST00000409403 ZCCHC13Q8WW36 166 aaKnown RBP3.6□□□□□ -1.83
CLK1-202ENST00000409403 TRGV2A0A075B6R0 118 aa3.59□□□□□ -1.83
CLK1-202ENST00000409403 IGKV3OR2-268A0A0C4DH90 116 aa3.59□□□□□ -1.83
CLK1-202ENST00000409403 A8MUN3 132 aa3.59□□□□□ -1.83
CLK1-202ENST00000409403 H3BPC8 53 aa3.59□□□□□ -1.83
CLK1-202ENST00000409403 CHKB-CPT1BH3BT56 60 aa3.59□□□□□ -1.83
CLK1-202ENST00000409403 M0R2N4 97 aa3.59□□□□□ -1.83
CLK1-202ENST00000409403 IGLV6-57P01721 117 aa3.59□□□□□ -1.83
CLK1-202ENST00000409403 Q5VV11 94 aa3.59□□□□□ -1.83
CLK1-202ENST00000409403 LCA10Q71F78 164 aa3.59□□□□□ -1.83
CLK1-202ENST00000409403 SPANXA2-OT1Q8N9U9 137 aa3.59□□□□□ -1.83
CLK1-202ENST00000409403 B9D2Q9BPU9 175 aa3.59□□□□□ -1.83
CLK1-202ENST00000409403 Q9BRP9 147 aa3.59□□□□□ -1.83
CLK1-202ENST00000409403 KRTAP7-1Q8IUC3 87 aa3.59□□□□□ -1.84
CLK1-202ENST00000409403 KRTAP2-2Q9BYT5 123 aa3.59□□□□□ -1.84
CLK1-202ENST00000409403 H3BUX3 64 aa3.58□□□□□ -1.84
CLK1-202ENST00000409403 MP68P56378 58 aa3.58□□□□□ -1.84
CLK1-202ENST00000409403 Q8N377 158 aa3.58□□□□□ -1.84
CLK1-202ENST00000409403 C16orf74Q96GX8 76 aa3.58□□□□□ -1.84
CLK1-202ENST00000409403 CELA1Q9UNI1 258 aa3.58□□□□□ -1.84
CLK1-202ENST00000409403 IGLV4-60A0A075B6I1 120 aa3.57□□□□□ -1.84
CLK1-202ENST00000409403 TRGV4A0A0C4DH28 118 aa3.57□□□□□ -1.84
CLK1-202ENST00000409403 LOC100131303A0A0U1RQF7 123 aa3.57□□□□□ -1.84
CLK1-202ENST00000409403 A6NN06 94 aa3.57□□□□□ -1.84
CLK1-202ENST00000409403 HCG22E2RYF7 251 aa3.57□□□□□ -1.84
CLK1-202ENST00000409403 LY6EQ16553 131 aa3.57□□□□□ -1.84
CLK1-202ENST00000409403 LINC01006Q8NI28 216 aa3.57□□□□□ -1.84
CLK1-202ENST00000409403 UBE2E2Q96LR5 201 aa3.57□□□□□ -1.84
CLK1-202ENST00000409403 CDC42SE1Q9NRR8 79 aa3.57□□□□□ -1.84
CLK1-202ENST00000409403 PLECQ15149 4684 aaKnown RBP3.57□□□□□ -1.84
CLK1-202ENST00000409403 DNAH10Q8IVF4 4471 aa3.56□□□□□ -1.84
CLK1-202ENST00000409403 C16orf90A8MZG2 172 aa3.56□□□□□ -1.84
CLK1-202ENST00000409403 CMC4P56277 68 aaPredicted RBP3.56□□□□□ -1.84
CLK1-202ENST00000409403 SPTSSBQ8NFR3 76 aa3.56□□□□□ -1.84
CLK1-202ENST00000409403 LINC00208Q96KT6 92 aa3.56□□□□□ -1.84
CLK1-202ENST00000409403 LOC101927531A0A1B0GV80 90 aa3.55□□□□□ -1.84
CLK1-202ENST00000409403 LRCOL1A6NCL2 159 aa3.55□□□□□ -1.84
CLK1-202ENST00000409403 A6NED7 52 aa3.55□□□□□ -1.84
CLK1-202ENST00000409403 RPL37AP8A6NKH3 93 aa3.55□□□□□ -1.84
CLK1-202ENST00000409403 KRTAP16-1A8MUX0 517 aa3.55□□□□□ -1.84
CLK1-202ENST00000409403 PRR3P79522 188 aaKnown RBP3.55□□□□□ -1.84
CLK1-202ENST00000409403 KIAA0087Q14695 138 aa3.55□□□□□ -1.84
CLK1-202ENST00000409403 NKAPP1Q8N9T2 125 aa3.55□□□□□ -1.84
CLK1-202ENST00000409403 PRR15LQ9BU68 103 aa3.55□□□□□ -1.84
CLK1-202ENST00000409403 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.55□□□□□ -1.84
CLK1-202ENST00000409403 GVQW2A0A096LPI5 108 aaPredicted RBP3.55□□□□□ -1.84
CLK1-202ENST00000409403 Q8N9L7 120 aa3.55□□□□□ -1.84
CLK1-202ENST00000409403 KMT2AQ03164 3969 aa3.55□□□□□ -1.84
CLK1-202ENST00000409403 CSNK1G2-AS1Q8NCQ2 148 aa3.54□□□□□ -1.84
CLK1-202ENST00000409403 KCNQ1DNQ9H478 68 aa3.54□□□□□ -1.84
CLK1-202ENST00000409403 HUWE1Q7Z6Z7 4374 aaKnown RBP3.53□□□□□ -1.84
CLK1-202ENST00000409403 PKHD1P08F94 4074 aa3.53□□□□□ -1.84
CLK1-202ENST00000409403 C8orf87E5RJ46 101 aa3.53□□□□□ -1.84
CLK1-202ENST00000409403 BRD3OSQ6XYD6 125 aa3.53□□□□□ -1.84
CLK1-202ENST00000409403 NOP10Q9NPE3 64 aaKnown RBP3.53□□□□□ -1.84
CLK1-202ENST00000409403 IGLV5-48A0A075B6I7 105 aa3.52□□□□□ -1.85
CLK1-202ENST00000409403 PRM2P04554 102 aa3.52□□□□□ -1.85
CLK1-202ENST00000409403 SPAG11BQ08648 103 aa3.52□□□□□ -1.85
CLK1-202ENST00000409403 ASB16-AS1Q495Z4 193 aa3.52□□□□□ -1.85
CLK1-202ENST00000409403 CHCHD10Q8WYQ3 142 aaPredicted RBP3.52□□□□□ -1.85
CLK1-202ENST00000409403 HSPG2P98160 4391 aa3.52□□□□□ -1.85
CLK1-202ENST00000409403 LINC00612Q8N6U2 182 aa3.52□□□□□ -1.85
CLK1-202ENST00000409403 WFDC10AQ9H1F0 79 aa3.52□□□□□ -1.85
CLK1-202ENST00000409403 RNF213Q63HN8 5207 aa3.51□□□□□ -1.85
CLK1-202ENST00000409403 REG3GQ6UW15 175 aa3.51□□□□□ -1.85
CLK1-202ENST00000409403 CASC2Q6XLA1 102 aa3.51□□□□□ -1.85
CLK1-202ENST00000409403 KRTAP5-9P26371 169 aa3.5□□□□□ -1.85
CLK1-202ENST00000409403 C9orf116Q5BN46 136 aaPredicted RBP3.5□□□□□ -1.85
CLK1-202ENST00000409403 C4orf3Q8WVX3 66 aa3.5□□□□□ -1.85
CLK1-202ENST00000409403 KLK12Q9UKR0 248 aa3.5□□□□□ -1.85
CLK1-202ENST00000409403 MUC2Q02817 5179 aa3.49□□□□□ -1.85
CLK1-202ENST00000409403 Q8NDZ9 215 aa3.49□□□□□ -1.85
CLK1-202ENST00000409403 SPRR4Q96PI1 79 aa3.49□□□□□ -1.85
CLK1-202ENST00000409403 DHRS4-AS1Q9P1J3 65 aa3.49□□□□□ -1.85
CLK1-202ENST00000409403 MSMBP08118 114 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 267 ms