RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 GIG44P09565 113 aaPredicted RBP8.75□□□□□ -1.01
AFF3-202ENST00000409236 LINC00612Q8N6U2 182 aa8.73□□□□□ -1.01
AFF3-202ENST00000409236 TEX15Q9BXT5 2789 aa8.7□□□□□ -1.02
AFF3-202ENST00000409236 MMP24-AS1A0A0U1RRL7 71 aa8.67□□□□□ -1.02
AFF3-202ENST00000409236 Q5W150 140 aa8.67□□□□□ -1.02
AFF3-202ENST00000409236 PLAC4Q8WY50 150 aa8.66□□□□□ -1.02
AFF3-202ENST00000409236 SEC61BP60468 96 aaKnown RBP8.66□□□□□ -1.02
AFF3-202ENST00000409236 C10orf142B7Z368 130 aa8.63□□□□□ -1.03
AFF3-202ENST00000409236 SMR3BP02814 79 aaPredicted RBP8.62□□□□□ -1.03
AFF3-202ENST00000409236 KRTAP24-1Q3LI83 254 aa8.6□□□□□ -1.03
AFF3-202ENST00000409236 M0QZ58 72 aa8.58□□□□□ -1.04
AFF3-202ENST00000409236 KRTAP10-11P60412 298 aa8.58□□□□□ -1.04
AFF3-202ENST00000409236 NSD1Q96L73 2696 aaPredicted RBP8.57□□□□□ -1.04
AFF3-202ENST00000409236 SRCAPQ6ZRS2 3230 aa8.56□□□□□ -1.04
AFF3-202ENST00000409236 CYSTM1Q9H1C7 97 aa8.56□□□□□ -1.04
AFF3-202ENST00000409236 K7EIL1 84 aa8.56□□□□□ -1.04
AFF3-202ENST00000409236 TEP1Q99973 2627 aaKnown RBP8.55□□□□□ -1.04
AFF3-202ENST00000409236 APCP25054 2843 aa8.54□□□□□ -1.04
AFF3-202ENST00000409236 KRTAP25-1Q3LHN0 102 aa8.53□□□□□ -1.04
AFF3-202ENST00000409236 LINC00472Q9H8W2 130 aa8.52□□□□□ -1.05
AFF3-202ENST00000409236 SPATA8Q6RVD6 105 aa8.49□□□□□ -1.05
AFF3-202ENST00000409236 Q6ZR54 194 aa8.49□□□□□ -1.05
AFF3-202ENST00000409236 C20orf166-AS1Q96NR2 134 aa8.48□□□□□ -1.05
AFF3-202ENST00000409236 A0A096LNT2 108 aa8.47□□□□□ -1.05
AFF3-202ENST00000409236 NDUFAF8A1L188 74 aa8.45□□□□□ -1.06
AFF3-202ENST00000409236 ITPR2Q14571 2701 aa8.45□□□□□ -1.06
AFF3-202ENST00000409236 CASC10Q5T4H9 136 aa8.44□□□□□ -1.06
AFF3-202ENST00000409236 UTP20O75691 2785 aaKnown RBP8.43□□□□□ -1.06
AFF3-202ENST00000409236 A6NN06 94 aa8.42□□□□□ -1.06
AFF3-202ENST00000409236 ADM2Q7Z4H4 148 aa8.42□□□□□ -1.06
AFF3-202ENST00000409236 PANO1I0J062 215 aa8.42□□□□□ -1.06
AFF3-202ENST00000409236 Q8NDZ9 215 aa8.42□□□□□ -1.06
AFF3-202ENST00000409236 OXTP01178 125 aa8.41□□□□□ -1.06
AFF3-202ENST00000409236 SPRR1AP35321 89 aa8.4□□□□□ -1.06
AFF3-202ENST00000409236 IGSF10Q6WRI0 2623 aa8.4□□□□□ -1.06
AFF3-202ENST00000409236 PLAC8Q9NZF1 115 aa8.4□□□□□ -1.06
AFF3-202ENST00000409236 A0A087X002 238 aa8.4□□□□□ -1.07
AFF3-202ENST00000409236 SPRR1BP22528 89 aa8.38□□□□□ -1.07
AFF3-202ENST00000409236 MAP1AP78559 2803 aaPredicted RBP8.36□□□□□ -1.07
AFF3-202ENST00000409236 SETXQ7Z333 2677 aaKnown RBP8.33□□□□□ -1.08
AFF3-202ENST00000409236 KRTAP26-1Q6PEX3 210 aa8.31□□□□□ -1.08
AFF3-202ENST00000409236 ZNF292O60281 2723 aa8.31□□□□□ -1.08
AFF3-202ENST00000409236 ITPR1Q14643 2758 aa8.26□□□□□ -1.09
AFF3-202ENST00000409236 NBEAL2Q6ZNJ1 2754 aa8.22□□□□□ -1.09
AFF3-202ENST00000409236 UBR5O95071 2799 aaPredicted RBP8.22□□□□□ -1.09
AFF3-202ENST00000409236 CEP350Q5VT06 3117 aa8.19□□□□□ -1.1
AFF3-202ENST00000409236 C10orf95Q9H7T3 257 aa8.18□□□□□ -1.1
AFF3-202ENST00000409236 KRTAP10-3P60369 221 aa8.18□□□□□ -1.1
AFF3-202ENST00000409236 PP632Q6XCG6 107 aa8.17□□□□□ -1.1
AFF3-202ENST00000409236 KRTAP29-1A8MX34 341 aaPredicted RBP8.13□□□□□ -1.11
AFF3-202ENST00000409236 A8MUU9 505 aa8.12□□□□□ -1.11
AFF3-202ENST00000409236 TNP1P09430 55 aa8.11□□□□□ -1.11
AFF3-202ENST00000409236 RPS29P62273 56 aaKnown RBP8.07□□□□□ -1.12
AFF3-202ENST00000409236 Q5VSD8 79 aa8.06□□□□□ -1.12
AFF3-202ENST00000409236 LCE6AA0A183 80 aa8.03□□□□□ -1.12
AFF3-202ENST00000409236 LRBAP50851 2863 aa8.03□□□□□ -1.12
AFF3-202ENST00000409236 A8MU10 97 aa8.02□□□□□ -1.13
AFF3-202ENST00000409236 PCNTO95613 3336 aa8.01□□□□□ -1.13
AFF3-202ENST00000409236 KRTAP11-1Q8IUC1 163 aa8□□□□□ -1.13
AFF3-202ENST00000409236 CFAP54Q96N23 3096 aa7.97□□□□□ -1.13
AFF3-202ENST00000409236 KRTAP4-16G5E9R7 235 aaPredicted RBP7.97□□□□□ -1.13
AFF3-202ENST00000409236 EP400Q96L91 3159 aa7.96□□□□□ -1.14
AFF3-202ENST00000409236 DSPP15924 2871 aaKnown RBP7.95□□□□□ -1.14
AFF3-202ENST00000409236 TRANK1O15050 2925 aa7.94□□□□□ -1.14
AFF3-202ENST00000409236 GOLGB1Q14789 3259 aaKnown RBP7.92□□□□□ -1.14
AFF3-202ENST00000409236 DNAH12Q6ZR08 3092 aa7.9□□□□□ -1.14
AFF3-202ENST00000409236 NOTCH2NLQ7Z3S9 236 aa7.87□□□□□ -1.15
AFF3-202ENST00000409236 TENM3Q9P273 2699 aa7.87□□□□□ -1.15
AFF3-202ENST00000409236 A0A0C4DFX4 3053 aa7.83□□□□□ -1.16
AFF3-202ENST00000409236 KRTAP1-3Q8IUG1 177 aa7.82□□□□□ -1.16
AFF3-202ENST00000409236 C5orf42Q9H799 3197 aa7.82□□□□□ -1.16
AFF3-202ENST00000409236 KRTAP1-1Q07627 177 aa7.8□□□□□ -1.16
AFF3-202ENST00000409236 KRTAP1-5Q9BYS1 174 aa7.8□□□□□ -1.16
AFF3-202ENST00000409236 P0C880 135 aa7.79□□□□□ -1.16
AFF3-202ENST00000409236 KRTAP10-1P60331 282 aa7.78□□□□□ -1.16
AFF3-202ENST00000409236 CHD9Q3L8U1 2897 aa7.74□□□□□ -1.17
AFF3-202ENST00000409236 LAMA2P24043 3122 aaKnown RBP7.74□□□□□ -1.17
AFF3-202ENST00000409236 TENM1Q9UKZ4 2725 aa7.72□□□□□ -1.17
AFF3-202ENST00000409236 TGP01266 2768 aa7.7□□□□□ -1.18
AFF3-202ENST00000409236 KRTAP10-2P60368 255 aa7.7□□□□□ -1.18
AFF3-202ENST00000409236 FRYLO94915 3013 aa7.7□□□□□ -1.18
AFF3-202ENST00000409236 KALRNO60229 2985 aa7.7□□□□□ -1.18
AFF3-202ENST00000409236 NF1P21359 2839 aa7.68□□□□□ -1.18
AFF3-202ENST00000409236 Q6ZRN7 208 aaPredicted RBP7.67□□□□□ -1.18
AFF3-202ENST00000409236 HIVEP1P15822 2718 aa7.65□□□□□ -1.18
AFF3-202ENST00000409236 ASH1LQ9NR48 2969 aaKnown RBP7.62□□□□□ -1.19
AFF3-202ENST00000409236 FRYQ5TBA9 3013 aa7.62□□□□□ -1.19
AFF3-202ENST00000409236 MGAQ8IWI9 3026 aa7.62□□□□□ -1.19
AFF3-202ENST00000409236 PRO2289Q9P1D8 64 aa7.59□□□□□ -1.19
AFF3-202ENST00000409236 H0YAA0 97 aa7.58□□□□□ -1.2
AFF3-202ENST00000409236 UTRNP46939 3433 aa7.56□□□□□ -1.2
AFF3-202ENST00000409236 KRTAP10-8P60410 259 aa7.56□□□□□ -1.2
AFF3-202ENST00000409236 FLNCQ14315 2725 aa7.56□□□□□ -1.2
AFF3-202ENST00000409236 TRIOO75962 3097 aa7.55□□□□□ -1.2
AFF3-202ENST00000409236 SRRM2Q9UQ35 2752 aaKnown RBP7.54□□□□□ -1.2
AFF3-202ENST00000409236 CHD7Q9P2D1 2997 aa7.53□□□□□ -1.2
AFF3-202ENST00000409236 NIPBLQ6KC79 2804 aaeCLIP7.52□□□□□ -1.21
AFF3-202ENST00000409236 PDZD2O15018 2839 aa7.52□□□□□ -1.21
AFF3-202ENST00000409236 KRTAP13-1Q8IUC0 172 aa7.48□□□□□ -1.21
AFF3-202ENST00000409236 KRTAP13-2Q52LG2 175 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms