RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 MMP24-AS1A0A0U1RRL7 71 aa2.98□□□□□ -1.93
SCN3A-203ENST00000409101 Q6ZRN7 208 aaPredicted RBP2.97□□□□□ -1.93
SCN3A-203ENST00000409101 ITPR3Q14573 2671 aa2.97□□□□□ -1.93
SCN3A-203ENST00000409101 HTTP42858 3142 aa2.97□□□□□ -1.93
SCN3A-203ENST00000409101 Q5W150 140 aa2.96□□□□□ -1.94
SCN3A-203ENST00000409101 KLKP1Q107X0 134 aa2.96□□□□□ -1.94
SCN3A-203ENST00000409101 SZT2Q5T011 3432 aa2.95□□□□□ -1.94
SCN3A-203ENST00000409101 R4GN34 69 aa2.95□□□□□ -1.94
SCN3A-203ENST00000409101 RPS28P62857 69 aaKnown RBP2.95□□□□□ -1.94
SCN3A-203ENST00000409101 PLAC4Q8WY50 150 aa2.95□□□□□ -1.94
SCN3A-203ENST00000409101 LINC00472Q9H8W2 130 aa2.95□□□□□ -1.94
SCN3A-203ENST00000409101 MKI67P46013 3256 aaKnown RBP2.94□□□□□ -1.94
SCN3A-203ENST00000409101 RPS29P62273 56 aaKnown RBP2.94□□□□□ -1.94
SCN3A-203ENST00000409101 A0A087X002 238 aa2.94□□□□□ -1.94
SCN3A-203ENST00000409101 A0A1B0GU33 70 aa2.94□□□□□ -1.94
SCN3A-203ENST00000409101 LCA10Q71F78 164 aa2.94□□□□□ -1.94
SCN3A-203ENST00000409101 Q8N9P0 234 aaPredicted RBP2.94□□□□□ -1.94
SCN3A-203ENST00000409101 LAMA3Q16787 3333 aa2.93□□□□□ -1.94
SCN3A-203ENST00000409101 LAMA2P24043 3122 aaKnown RBP2.93□□□□□ -1.94
SCN3A-203ENST00000409101 MGAM2Q2M2H8 2515 aa2.92□□□□□ -1.94
SCN3A-203ENST00000409101 PRO0628Q9UI54 55 aa2.92□□□□□ -1.94
SCN3A-203ENST00000409101 DMAC1Q96GE9 116 aa2.92□□□□□ -1.94
SCN3A-203ENST00000409101 CHD9Q3L8U1 2897 aa2.92□□□□□ -1.94
SCN3A-203ENST00000409101 DNAH12Q6ZR08 3092 aa2.92□□□□□ -1.94
SCN3A-203ENST00000409101 OCR1Q9BZK8 76 aa2.91□□□□□ -1.94
SCN3A-203ENST00000409101 TEP1Q99973 2627 aaKnown RBP2.91□□□□□ -1.94
SCN3A-203ENST00000409101 CHD7Q9P2D1 2997 aa2.91□□□□□ -1.94
SCN3A-203ENST00000409101 M0QZ58 72 aa2.91□□□□□ -1.94
SCN3A-203ENST00000409101 ASH1LQ9NR48 2969 aaKnown RBP2.9□□□□□ -1.94
SCN3A-203ENST00000409101 H7BZZ5 65 aa2.9□□□□□ -1.94
SCN3A-203ENST00000409101 UNC80Q8N2C7 3258 aa2.9□□□□□ -1.95
SCN3A-203ENST00000409101 CFAP46Q8IYW2 2715 aa2.9□□□□□ -1.95
SCN3A-203ENST00000409101 KRTAP4-16G5E9R7 235 aaPredicted RBP2.89□□□□□ -1.95
SCN3A-203ENST00000409101 PRUNE2Q8WUY3 3088 aa2.89□□□□□ -1.95
SCN3A-203ENST00000409101 ADM2Q7Z4H4 148 aa2.88□□□□□ -1.95
SCN3A-203ENST00000409101 H1FX-AS1Q4G0G2 97 aa2.88□□□□□ -1.95
SCN3A-203ENST00000409101 Q75L30 129 aa2.88□□□□□ -1.95
SCN3A-203ENST00000409101 RPL37P61927 97 aaKnown RBP2.87□□□□□ -1.95
SCN3A-203ENST00000409101 KRTAP11-1Q8IUC1 163 aa2.87□□□□□ -1.95
SCN3A-203ENST00000409101 BRCA2P51587 3418 aa2.87□□□□□ -1.95
SCN3A-203ENST00000409101 ATRQ13535 2644 aa2.87□□□□□ -1.95
SCN3A-203ENST00000409101 Q1T7F1 81 aa2.87□□□□□ -1.95
SCN3A-203ENST00000409101 ASB16-AS1Q495Z4 193 aa2.87□□□□□ -1.95
SCN3A-203ENST00000409101 KRTAP13-2Q52LG2 175 aa2.86□□□□□ -1.95
SCN3A-203ENST00000409101 IGSF10Q6WRI0 2623 aa2.85□□□□□ -1.95
SCN3A-203ENST00000409101 C20orf166-AS1Q96NR2 134 aa2.85□□□□□ -1.95
SCN3A-203ENST00000409101 CFAP54Q96N23 3096 aa2.85□□□□□ -1.95
SCN3A-203ENST00000409101 C5orf42Q9H799 3197 aa2.84□□□□□ -1.95
SCN3A-203ENST00000409101 LUZP6Q538Z0 58 aa2.83□□□□□ -1.96
SCN3A-203ENST00000409101 AKAP13Q12802 2813 aa2.83□□□□□ -1.96
SCN3A-203ENST00000409101 Q5XG85 94 aa2.83□□□□□ -1.96
SCN3A-203ENST00000409101 VCANP13611 3396 aa2.83□□□□□ -1.96
SCN3A-203ENST00000409101 KRTAP13-1Q8IUC0 172 aa2.82□□□□□ -1.96
SCN3A-203ENST00000409101 KRTAP7-1Q8IUC3 87 aa2.82□□□□□ -1.96
SCN3A-203ENST00000409101 LINC01558Q9Y6Z2 57 aa2.82□□□□□ -1.96
SCN3A-203ENST00000409101 UBR5O95071 2799 aaPredicted RBP2.8□□□□□ -1.96
SCN3A-203ENST00000409101 DSPP15924 2871 aaKnown RBP2.8□□□□□ -1.96
SCN3A-203ENST00000409101 A8MUU9 505 aa2.79□□□□□ -1.96
SCN3A-203ENST00000409101 NOTCH2NLQ7Z3S9 236 aa2.79□□□□□ -1.96
SCN3A-203ENST00000409101 SPTBN5Q9NRC6 3674 aaKnown RBP2.78□□□□□ -1.96
SCN3A-203ENST00000409101 KRTAP29-1A8MX34 341 aaPredicted RBP2.78□□□□□ -1.96
SCN3A-203ENST00000409101 BPTFQ12830 3046 aa2.77□□□□□ -1.97
SCN3A-203ENST00000409101 TEX15Q9BXT5 2789 aa2.77□□□□□ -1.97
SCN3A-203ENST00000409101 REV3LO60673 3130 aa2.77□□□□□ -1.97
SCN3A-203ENST00000409101 KTN1-AS1Q86SY8 53 aa2.77□□□□□ -1.97
SCN3A-203ENST00000409101 ITPR1Q14643 2758 aa2.76□□□□□ -1.97
SCN3A-203ENST00000409101 A0A1B0GVY2 172 aa2.76□□□□□ -1.97
SCN3A-203ENST00000409101 ROMO1P60602 79 aa2.76□□□□□ -1.97
SCN3A-203ENST00000409101 TPRXLQ17RH7 258 aa2.76□□□□□ -1.97
SCN3A-203ENST00000409101 XP32Q5T750 250 aa2.76□□□□□ -1.97
SCN3A-203ENST00000409101 SPATA8Q6RVD6 105 aa2.75□□□□□ -1.97
SCN3A-203ENST00000409101 COL6A5A8TX70 2615 aa2.75□□□□□ -1.97
SCN3A-203ENST00000409101 CFAP47Q6ZTR5 3102 aa2.74□□□□□ -1.97
SCN3A-203ENST00000409101 KRTAP1-4P0C5Y4 121 aa2.74□□□□□ -1.97
SCN3A-203ENST00000409101 MGAQ8IWI9 3026 aa2.74□□□□□ -1.97
SCN3A-203ENST00000409101 MUC3AQ02505 3323 aa2.74□□□□□ -1.97
SCN3A-203ENST00000409101 CENPEQ02224 2701 aa2.73□□□□□ -1.97
SCN3A-203ENST00000409101 STAB1Q9NY15 2570 aa2.73□□□□□ -1.97
SCN3A-203ENST00000409101 TRIOO75962 3097 aa2.72□□□□□ -1.97
SCN3A-203ENST00000409101 EYSQ5T1H1 3165 aa2.72□□□□□ -1.97
SCN3A-203ENST00000409101 NBEAL1Q6ZS30 2694 aa2.71□□□□□ -1.98
SCN3A-203ENST00000409101 PRRC2CQ9Y520 2896 aaKnown RBP2.71□□□□□ -1.98
SCN3A-203ENST00000409101 ITPR2Q14571 2701 aa2.7□□□□□ -1.98
SCN3A-203ENST00000409101 KRTAP10-10P60014 251 aa2.7□□□□□ -1.98
SCN3A-203ENST00000409101 Q5VV11 94 aa2.7□□□□□ -1.98
SCN3A-203ENST00000409101 NOTCH1P46531 2555 aa2.7□□□□□ -1.98
SCN3A-203ENST00000409101 DMXL1Q9Y485 3027 aa2.69□□□□□ -1.98
SCN3A-203ENST00000409101 FLNCQ14315 2725 aa2.69□□□□□ -1.98
SCN3A-203ENST00000409101 CDH23Q9H251 3354 aa2.68□□□□□ -1.98
SCN3A-203ENST00000409101 FBN3Q75N90 2809 aa2.68□□□□□ -1.98
SCN3A-203ENST00000409101 WDFY4Q6ZS81 3184 aa2.67□□□□□ -1.98
SCN3A-203ENST00000409101 KRTAP13-3Q3SY46 172 aa2.67□□□□□ -1.98
SCN3A-203ENST00000409101 FRYLO94915 3013 aa2.67□□□□□ -1.98
SCN3A-203ENST00000409101 TNP1P09430 55 aa2.67□□□□□ -1.98
SCN3A-203ENST00000409101 ZZEF1O43149 2961 aa2.66□□□□□ -1.98
SCN3A-203ENST00000409101 CYSTM1Q9H1C7 97 aa2.66□□□□□ -1.98
SCN3A-203ENST00000409101 KRTAP10-8P60410 259 aa2.66□□□□□ -1.98
SCN3A-203ENST00000409101 DCHS1Q96JQ0 3298 aa2.66□□□□□ -1.98
SCN3A-203ENST00000409101 TENM4Q6N022 2769 aa2.66□□□□□ -1.98
SCN3A-203ENST00000409101 KALRNO60229 2985 aa2.65□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms