RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 MMP24-AS1A0A0U1RRL7 71 aa2.98□□□□□ -1.93
SCN3A-203ENST00000409101 Q6ZRN7 208 aaPredicted RBP2.97□□□□□ -1.93
SCN3A-203ENST00000409101 ITPR3Q14573 2671 aa2.97□□□□□ -1.93
SCN3A-203ENST00000409101 HTTP42858 3142 aa2.97□□□□□ -1.93
SCN3A-203ENST00000409101 Q5W150 140 aa2.96□□□□□ -1.94
SCN3A-203ENST00000409101 KLKP1Q107X0 134 aa2.96□□□□□ -1.94
SCN3A-203ENST00000409101 SZT2Q5T011 3432 aa2.95□□□□□ -1.94
SCN3A-203ENST00000409101 R4GN34 69 aa2.95□□□□□ -1.94
SCN3A-203ENST00000409101 RPS28P62857 69 aaKnown RBP2.95□□□□□ -1.94
SCN3A-203ENST00000409101 PLAC4Q8WY50 150 aa2.95□□□□□ -1.94
SCN3A-203ENST00000409101 LINC00472Q9H8W2 130 aa2.95□□□□□ -1.94
SCN3A-203ENST00000409101 MKI67P46013 3256 aaKnown RBP2.94□□□□□ -1.94
SCN3A-203ENST00000409101 RPS29P62273 56 aaKnown RBP2.94□□□□□ -1.94
SCN3A-203ENST00000409101 A0A087X002 238 aa2.94□□□□□ -1.94
SCN3A-203ENST00000409101 A0A1B0GU33 70 aa2.94□□□□□ -1.94
SCN3A-203ENST00000409101 LCA10Q71F78 164 aa2.94□□□□□ -1.94
SCN3A-203ENST00000409101 Q8N9P0 234 aaPredicted RBP2.94□□□□□ -1.94
SCN3A-203ENST00000409101 LAMA3Q16787 3333 aa2.93□□□□□ -1.94
SCN3A-203ENST00000409101 LAMA2P24043 3122 aaKnown RBP2.93□□□□□ -1.94
SCN3A-203ENST00000409101 MGAM2Q2M2H8 2515 aa2.92□□□□□ -1.94
SCN3A-203ENST00000409101 PRO0628Q9UI54 55 aa2.92□□□□□ -1.94
SCN3A-203ENST00000409101 DMAC1Q96GE9 116 aa2.92□□□□□ -1.94
SCN3A-203ENST00000409101 CHD9Q3L8U1 2897 aa2.92□□□□□ -1.94
SCN3A-203ENST00000409101 DNAH12Q6ZR08 3092 aa2.92□□□□□ -1.94
SCN3A-203ENST00000409101 OCR1Q9BZK8 76 aa2.91□□□□□ -1.94
SCN3A-203ENST00000409101 TEP1Q99973 2627 aaKnown RBP2.91□□□□□ -1.94
SCN3A-203ENST00000409101 CHD7Q9P2D1 2997 aa2.91□□□□□ -1.94
SCN3A-203ENST00000409101 M0QZ58 72 aa2.91□□□□□ -1.94
SCN3A-203ENST00000409101 ASH1LQ9NR48 2969 aaKnown RBP2.9□□□□□ -1.94
SCN3A-203ENST00000409101 H7BZZ5 65 aa2.9□□□□□ -1.94
SCN3A-203ENST00000409101 UNC80Q8N2C7 3258 aa2.9□□□□□ -1.95
SCN3A-203ENST00000409101 CFAP46Q8IYW2 2715 aa2.9□□□□□ -1.95
SCN3A-203ENST00000409101 KRTAP4-16G5E9R7 235 aaPredicted RBP2.89□□□□□ -1.95
SCN3A-203ENST00000409101 PRUNE2Q8WUY3 3088 aa2.89□□□□□ -1.95
SCN3A-203ENST00000409101 ADM2Q7Z4H4 148 aa2.88□□□□□ -1.95
SCN3A-203ENST00000409101 H1FX-AS1Q4G0G2 97 aa2.88□□□□□ -1.95
SCN3A-203ENST00000409101 Q75L30 129 aa2.88□□□□□ -1.95
SCN3A-203ENST00000409101 RPL37P61927 97 aaKnown RBP2.87□□□□□ -1.95
SCN3A-203ENST00000409101 KRTAP11-1Q8IUC1 163 aa2.87□□□□□ -1.95
SCN3A-203ENST00000409101 BRCA2P51587 3418 aa2.87□□□□□ -1.95
SCN3A-203ENST00000409101 ATRQ13535 2644 aa2.87□□□□□ -1.95
SCN3A-203ENST00000409101 Q1T7F1 81 aa2.87□□□□□ -1.95
SCN3A-203ENST00000409101 ASB16-AS1Q495Z4 193 aa2.87□□□□□ -1.95
SCN3A-203ENST00000409101 KRTAP13-2Q52LG2 175 aa2.86□□□□□ -1.95
SCN3A-203ENST00000409101 IGSF10Q6WRI0 2623 aa2.85□□□□□ -1.95
SCN3A-203ENST00000409101 C20orf166-AS1Q96NR2 134 aa2.85□□□□□ -1.95
SCN3A-203ENST00000409101 CFAP54Q96N23 3096 aa2.85□□□□□ -1.95
SCN3A-203ENST00000409101 C5orf42Q9H799 3197 aa2.84□□□□□ -1.95
SCN3A-203ENST00000409101 LUZP6Q538Z0 58 aa2.83□□□□□ -1.96
SCN3A-203ENST00000409101 AKAP13Q12802 2813 aa2.83□□□□□ -1.96
SCN3A-203ENST00000409101 Q5XG85 94 aa2.83□□□□□ -1.96
SCN3A-203ENST00000409101 VCANP13611 3396 aa2.83□□□□□ -1.96
SCN3A-203ENST00000409101 KRTAP13-1Q8IUC0 172 aa2.82□□□□□ -1.96
SCN3A-203ENST00000409101 KRTAP7-1Q8IUC3 87 aa2.82□□□□□ -1.96
SCN3A-203ENST00000409101 LINC01558Q9Y6Z2 57 aa2.82□□□□□ -1.96
SCN3A-203ENST00000409101 UBR5O95071 2799 aaPredicted RBP2.8□□□□□ -1.96
SCN3A-203ENST00000409101 DSPP15924 2871 aaKnown RBP2.8□□□□□ -1.96
SCN3A-203ENST00000409101 A8MUU9 505 aa2.79□□□□□ -1.96
SCN3A-203ENST00000409101 NOTCH2NLQ7Z3S9 236 aa2.79□□□□□ -1.96
SCN3A-203ENST00000409101 SPTBN5Q9NRC6 3674 aaKnown RBP2.78□□□□□ -1.96
SCN3A-203ENST00000409101 KRTAP29-1A8MX34 341 aaPredicted RBP2.78□□□□□ -1.96
SCN3A-203ENST00000409101 BPTFQ12830 3046 aa2.77□□□□□ -1.97
SCN3A-203ENST00000409101 TEX15Q9BXT5 2789 aa2.77□□□□□ -1.97
SCN3A-203ENST00000409101 REV3LO60673 3130 aa2.77□□□□□ -1.97
SCN3A-203ENST00000409101 KTN1-AS1Q86SY8 53 aa2.77□□□□□ -1.97
SCN3A-203ENST00000409101 ITPR1Q14643 2758 aa2.76□□□□□ -1.97
SCN3A-203ENST00000409101 A0A1B0GVY2 172 aa2.76□□□□□ -1.97
SCN3A-203ENST00000409101 ROMO1P60602 79 aa2.76□□□□□ -1.97
SCN3A-203ENST00000409101 TPRXLQ17RH7 258 aa2.76□□□□□ -1.97
SCN3A-203ENST00000409101 XP32Q5T750 250 aa2.76□□□□□ -1.97
SCN3A-203ENST00000409101 SPATA8Q6RVD6 105 aa2.75□□□□□ -1.97
SCN3A-203ENST00000409101 COL6A5A8TX70 2615 aa2.75□□□□□ -1.97
SCN3A-203ENST00000409101 CFAP47Q6ZTR5 3102 aa2.74□□□□□ -1.97
SCN3A-203ENST00000409101 KRTAP1-4P0C5Y4 121 aa2.74□□□□□ -1.97
SCN3A-203ENST00000409101 MGAQ8IWI9 3026 aa2.74□□□□□ -1.97
SCN3A-203ENST00000409101 MUC3AQ02505 3323 aa2.74□□□□□ -1.97
SCN3A-203ENST00000409101 CENPEQ02224 2701 aa2.73□□□□□ -1.97
SCN3A-203ENST00000409101 STAB1Q9NY15 2570 aa2.73□□□□□ -1.97
SCN3A-203ENST00000409101 TRIOO75962 3097 aa2.72□□□□□ -1.97
SCN3A-203ENST00000409101 EYSQ5T1H1 3165 aa2.72□□□□□ -1.97
SCN3A-203ENST00000409101 NBEAL1Q6ZS30 2694 aa2.71□□□□□ -1.98
SCN3A-203ENST00000409101 PRRC2CQ9Y520 2896 aaKnown RBP2.71□□□□□ -1.98
SCN3A-203ENST00000409101 ITPR2Q14571 2701 aa2.7□□□□□ -1.98
SCN3A-203ENST00000409101 KRTAP10-10P60014 251 aa2.7□□□□□ -1.98
SCN3A-203ENST00000409101 Q5VV11 94 aa2.7□□□□□ -1.98
SCN3A-203ENST00000409101 NOTCH1P46531 2555 aa2.7□□□□□ -1.98
SCN3A-203ENST00000409101 DMXL1Q9Y485 3027 aa2.69□□□□□ -1.98
SCN3A-203ENST00000409101 FLNCQ14315 2725 aa2.69□□□□□ -1.98
SCN3A-203ENST00000409101 CDH23Q9H251 3354 aa2.68□□□□□ -1.98
SCN3A-203ENST00000409101 FBN3Q75N90 2809 aa2.68□□□□□ -1.98
SCN3A-203ENST00000409101 WDFY4Q6ZS81 3184 aa2.67□□□□□ -1.98
SCN3A-203ENST00000409101 KRTAP13-3Q3SY46 172 aa2.67□□□□□ -1.98
SCN3A-203ENST00000409101 FRYLO94915 3013 aa2.67□□□□□ -1.98
SCN3A-203ENST00000409101 TNP1P09430 55 aa2.67□□□□□ -1.98
SCN3A-203ENST00000409101 ZZEF1O43149 2961 aa2.66□□□□□ -1.98
SCN3A-203ENST00000409101 CYSTM1Q9H1C7 97 aa2.66□□□□□ -1.98
SCN3A-203ENST00000409101 KRTAP10-8P60410 259 aa2.66□□□□□ -1.98
SCN3A-203ENST00000409101 DCHS1Q96JQ0 3298 aa2.66□□□□□ -1.98
SCN3A-203ENST00000409101 TENM4Q6N022 2769 aa2.66□□□□□ -1.98
SCN3A-203ENST00000409101 KALRNO60229 2985 aa2.65□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms