RNA–Protein interactions for RNA: ENST00000406908.3

HMGA1P7-201, Transcript of high mobility group AT-hook 1 pseudogene 7, humanhuman

BASIC

Gene HMGA1P7, Length 502 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P7-201ENST00000406908 NAA38Q9BRA0 125 aaKnown RBP9.74□□□□□ -0.85
HMGA1P7-201ENST00000406908 SCGB1C2P0DMR2 95 aa9.73□□□□□ -0.85
HMGA1P7-201ENST00000406908 OCIAD2Q56VL3 154 aa9.7□□□□□ -0.86
HMGA1P7-201ENST00000406908 SPAG11AQ6PDA7 123 aa9.7□□□□□ -0.86
HMGA1P7-201ENST00000406908 SNHG12Q9BXW3 62 aa9.7□□□□□ -0.86
HMGA1P7-201ENST00000406908 PPDPFLQ8WWR9 84 aa9.69□□□□□ -0.86
HMGA1P7-201ENST00000406908 PCP4L1A6NKN8 68 aa9.68□□□□□ -0.86
HMGA1P7-201ENST00000406908 C4orf48Q5BLP8 95 aa9.68□□□□□ -0.86
HMGA1P7-201ENST00000406908 HMCN2Q8NDA2 5059 aa9.67□□□□□ -0.86
HMGA1P7-201ENST00000406908 LST1O00453 97 aa9.67□□□□□ -0.86
HMGA1P7-201ENST00000406908 TAX1BP3O14907 124 aa9.67□□□□□ -0.86
HMGA1P7-201ENST00000406908 A0A0G2JQZ4 141 aa9.65□□□□□ -0.86
HMGA1P7-201ENST00000406908 H3BUT2 72 aa9.65□□□□□ -0.86
HMGA1P7-201ENST00000406908 DNAL4O96015 105 aa9.65□□□□□ -0.86
HMGA1P7-201ENST00000406908 TRACP01848 142 aa9.65□□□□□ -0.86
HMGA1P7-201ENST00000406908 C9orf118A6NHY6 69 aa9.64□□□□□ -0.87
HMGA1P7-201ENST00000406908 F8WEM9 126 aa9.64□□□□□ -0.87
HMGA1P7-201ENST00000406908 TCL1BO95988 128 aa9.64□□□□□ -0.87
HMGA1P7-201ENST00000406908 SPINK1P00995 79 aa9.63□□□□□ -0.87
HMGA1P7-201ENST00000406908 GHRHP01286 108 aa9.63□□□□□ -0.87
HMGA1P7-201ENST00000406908 FABP2P12104 132 aa9.63□□□□□ -0.87
HMGA1P7-201ENST00000406908 ORMDL1Q9P0S3 153 aa9.63□□□□□ -0.87
HMGA1P7-201ENST00000406908 IGLV8-61A0A075B6I0 122 aa9.62□□□□□ -0.87
HMGA1P7-201ENST00000406908 NDUFV3P56181 108 aaKnown RBP9.62□□□□□ -0.87
HMGA1P7-201ENST00000406908 HRCT1Q6UXD1 115 aa9.61□□□□□ -0.87
HMGA1P7-201ENST00000406908 ATXN8Q156A1 80 aa9.6□□□□□ -0.87
HMGA1P7-201ENST00000406908 RETNLBQ9BQ08 111 aa9.59□□□□□ -0.87
HMGA1P7-201ENST00000406908 H3BQ85 93 aa9.58□□□□□ -0.88
HMGA1P7-201ENST00000406908 TMEM256-PLSCR3K7ERE1 68 aa9.58□□□□□ -0.88
HMGA1P7-201ENST00000406908 RPS29P62273 56 aaKnown RBP9.58□□□□□ -0.88
HMGA1P7-201ENST00000406908 COL5A1-AS1Q5SY13 56 aa9.58□□□□□ -0.88
HMGA1P7-201ENST00000406908 LYRM7Q5U5X0 104 aa9.58□□□□□ -0.88
HMGA1P7-201ENST00000406908 Q6JHZ5 121 aa9.58□□□□□ -0.88
HMGA1P7-201ENST00000406908 IGFL1Q6UW32 110 aa9.58□□□□□ -0.88
HMGA1P7-201ENST00000406908 CD164Q04900 197 aa9.57□□□□□ -0.88
HMGA1P7-201ENST00000406908 TRBV20-1A0A075B6N2 111 aa9.56□□□□□ -0.88
HMGA1P7-201ENST00000406908 A0A1W2PPM0 123 aa9.56□□□□□ -0.88
HMGA1P7-201ENST00000406908 H3BMG7 143 aa9.56□□□□□ -0.88
HMGA1P7-201ENST00000406908 BAALC-AS2P0C853 105 aa9.55□□□□□ -0.88
HMGA1P7-201ENST00000406908 PRR4Q16378 134 aa9.55□□□□□ -0.88
HMGA1P7-201ENST00000406908 UBE2V1Q13404 147 aa9.54□□□□□ -0.88
HMGA1P7-201ENST00000406908 A0A1B0GV72 72 aa9.5□□□□□ -0.89
HMGA1P7-201ENST00000406908 C9JAW5 83 aa9.49□□□□□ -0.89
HMGA1P7-201ENST00000406908 ANKRD29Q8N6D5 301 aa9.49□□□□□ -0.89
HMGA1P7-201ENST00000406908 LIMD2Q9BT23 127 aa9.49□□□□□ -0.89
HMGA1P7-201ENST00000406908 Q5XG85 94 aa9.48□□□□□ -0.89
HMGA1P7-201ENST00000406908 LPAP08519 4548 aa9.47□□□□□ -0.89
HMGA1P7-201ENST00000406908 TRBV7-7A0A0K0K1E9 115 aa9.47□□□□□ -0.89
HMGA1P7-201ENST00000406908 SPCS1Q9Y6A9 102 aa9.47□□□□□ -0.89
HMGA1P7-201ENST00000406908 IGLV7-46A0A075B6I9 117 aa9.46□□□□□ -0.9
HMGA1P7-201ENST00000406908 A0A1W2PNM2 257 aa9.45□□□□□ -0.9
HMGA1P7-201ENST00000406908 Q6Q795 121 aa9.44□□□□□ -0.9
HMGA1P7-201ENST00000406908 FP248Q71RG6 208 aaPredicted RBP9.44□□□□□ -0.9
HMGA1P7-201ENST00000406908 TEN1Q86WV5 123 aa9.44□□□□□ -0.9
HMGA1P7-201ENST00000406908 LRP2P98164 4655 aa9.44□□□□□ -0.9
HMGA1P7-201ENST00000406908 RBM3P98179 157 aaKnown RBP9.43□□□□□ -0.9
HMGA1P7-201ENST00000406908 MTURNQ8N3F0 131 aa9.43□□□□□ -0.9
HMGA1P7-201ENST00000406908 TRBV7-4A0A0J9YYF1 115 aa9.41□□□□□ -0.9
HMGA1P7-201ENST00000406908 C1orf195Q5TG92 126 aa9.41□□□□□ -0.9
HMGA1P7-201ENST00000406908 H3BT86 120 aa9.39□□□□□ -0.91
HMGA1P7-201ENST00000406908 K7EP34 96 aa9.39□□□□□ -0.91
HMGA1P7-201ENST00000406908 DSCR8Q96T75 97 aa9.39□□□□□ -0.91
HMGA1P7-201ENST00000406908 JMJD7-PLA2G4BH0Y9G9 81 aa9.38□□□□□ -0.91
HMGA1P7-201ENST00000406908 ASB16-AS1Q495Z4 193 aa9.38□□□□□ -0.91
HMGA1P7-201ENST00000406908 A0A087WSZ3 146 aa9.37□□□□□ -0.91
HMGA1P7-201ENST00000406908 CCKP06307 115 aa9.37□□□□□ -0.91
HMGA1P7-201ENST00000406908 OBSCN-AS1Q96MR7 158 aa9.36□□□□□ -0.91
HMGA1P7-201ENST00000406908 SMCPP49901 116 aaPredicted RBP9.35□□□□□ -0.91
HMGA1P7-201ENST00000406908 TPRXLQ17RH7 258 aa9.35□□□□□ -0.91
HMGA1P7-201ENST00000406908 KRTAP13-3Q3SY46 172 aa9.34□□□□□ -0.91
HMGA1P7-201ENST00000406908 VPS25Q9BRG1 176 aa9.33□□□□□ -0.92
HMGA1P7-201ENST00000406908 SS18L2Q9UHA2 77 aa9.33□□□□□ -0.92
HMGA1P7-201ENST00000406908 PRO0461Q9UI25 63 aa9.33□□□□□ -0.92
HMGA1P7-201ENST00000406908 UBR4Q5T4S7 5183 aa9.32□□□□□ -0.92
HMGA1P7-201ENST00000406908 LOC110117498A0A087WWA1 95 aa9.32□□□□□ -0.92
HMGA1P7-201ENST00000406908 Q6ZQT0 140 aa9.32□□□□□ -0.92
HMGA1P7-201ENST00000406908 C14orf132Q9NPU4 83 aa9.32□□□□□ -0.92
HMGA1P7-201ENST00000406908 GTF2H5Q6ZYL4 71 aa9.31□□□□□ -0.92
HMGA1P7-201ENST00000406908 PDE6GP18545 87 aa9.29□□□□□ -0.92
HMGA1P7-201ENST00000406908 CDIP1Q9H305 208 aa9.29□□□□□ -0.92
HMGA1P7-201ENST00000406908 Q96NJ1 140 aa9.28□□□□□ -0.92
HMGA1P7-201ENST00000406908 C9orf92A6NGG3 77 aa9.23□□□□□ -0.93
HMGA1P7-201ENST00000406908 LINC00472Q9H8W2 130 aa9.22□□□□□ -0.93
HMGA1P7-201ENST00000406908 A0A1B0GW54 56 aa9.21□□□□□ -0.94
HMGA1P7-201ENST00000406908 F8W1H4 67 aa9.21□□□□□ -0.94
HMGA1P7-201ENST00000406908 MUC17Q685J3 4493 aa9.21□□□□□ -0.94
HMGA1P7-201ENST00000406908 C21orf62-AS1Q17RA5 79 aa9.2□□□□□ -0.94
HMGA1P7-201ENST00000406908 DEFB116Q30KQ4 102 aa9.2□□□□□ -0.94
HMGA1P7-201ENST00000406908 XP32Q5T750 250 aa9.18□□□□□ -0.94
HMGA1P7-201ENST00000406908 A0A1B0GV90 55 aa9.17□□□□□ -0.94
HMGA1P7-201ENST00000406908 IGKV4-1P06312 121 aa9.17□□□□□ -0.94
HMGA1P7-201ENST00000406908 ETDBQ3ZM63 59 aa9.15□□□□□ -0.94
HMGA1P7-201ENST00000406908 SIGMAR1Q99720 223 aa9.15□□□□□ -0.94
HMGA1P7-201ENST00000406908 RNF213Q63HN8 5207 aa9.15□□□□□ -0.95
HMGA1P7-201ENST00000406908 NREPQ16612 68 aa9.1□□□□□ -0.95
HMGA1P7-201ENST00000406908 J3KT08 172 aa9.09□□□□□ -0.95
HMGA1P7-201ENST00000406908 DSCR10P59022 87 aa9.07□□□□□ -0.96
HMGA1P7-201ENST00000406908 NOTCH2NLQ7Z3S9 236 aa9.06□□□□□ -0.96
HMGA1P7-201ENST00000406908 SEC61BP60468 96 aaKnown RBP9.05□□□□□ -0.96
HMGA1P7-201ENST00000406908 IGHV6-1A0A0B4J1U7 121 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms