RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 LAMA1P25391 3075 aa7.45□□□□□ -1.22
RAPGEF3-204ENST00000405493 IGLV5-48A0A075B6I7 105 aa7.43□□□□□ -1.22
RAPGEF3-204ENST00000405493 KTN1-AS1Q86SY8 53 aa7.42□□□□□ -1.22
RAPGEF3-204ENST00000405493 CFAP54Q96N23 3096 aa7.42□□□□□ -1.22
RAPGEF3-204ENST00000405493 SPANXA2-OT1Q8N9U9 137 aa7.42□□□□□ -1.22
RAPGEF3-204ENST00000405493 IGLV7-46A0A075B6I9 117 aa7.41□□□□□ -1.22
RAPGEF3-204ENST00000405493 Q1T7F1 81 aa7.4□□□□□ -1.22
RAPGEF3-204ENST00000405493 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.4□□□□□ -1.22
RAPGEF3-204ENST00000405493 VCANP13611 3396 aa7.4□□□□□ -1.22
RAPGEF3-204ENST00000405493 CHD6Q8TD26 2715 aa7.39□□□□□ -1.23
RAPGEF3-204ENST00000405493 GCN1Q92616 2671 aaKnown RBP7.39□□□□□ -1.23
RAPGEF3-204ENST00000405493 Q5VSD8 79 aa7.38□□□□□ -1.23
RAPGEF3-204ENST00000405493 TEX15Q9BXT5 2789 aa7.37□□□□□ -1.23
RAPGEF3-204ENST00000405493 FP248Q71RG6 208 aaPredicted RBP7.37□□□□□ -1.23
RAPGEF3-204ENST00000405493 UQCR11O14957 56 aa7.37□□□□□ -1.23
RAPGEF3-204ENST00000405493 Q6ZSA8 131 aa7.36□□□□□ -1.23
RAPGEF3-204ENST00000405493 PRR26Q8N8Z3 221 aa7.35□□□□□ -1.23
RAPGEF3-204ENST00000405493 EYSQ5T1H1 3165 aa7.35□□□□□ -1.23
RAPGEF3-204ENST00000405493 REV3LO60673 3130 aa7.35□□□□□ -1.23
RAPGEF3-204ENST00000405493 LCA10Q71F78 164 aa7.33□□□□□ -1.24
RAPGEF3-204ENST00000405493 CDC42SE1Q9NRR8 79 aa7.33□□□□□ -1.24
RAPGEF3-204ENST00000405493 OXTP01178 125 aa7.32□□□□□ -1.24
RAPGEF3-204ENST00000405493 MIR22HGQ0VDD5 57 aa7.31□□□□□ -1.24
RAPGEF3-204ENST00000405493 Q6ZR54 194 aa7.31□□□□□ -1.24
RAPGEF3-204ENST00000405493 SPTBN5Q9NRC6 3674 aaKnown RBP7.3□□□□□ -1.24
RAPGEF3-204ENST00000405493 Q8NDZ9 215 aa7.3□□□□□ -1.24
RAPGEF3-204ENST00000405493 DNAH14Q0VDD8 3507 aa7.28□□□□□ -1.24
RAPGEF3-204ENST00000405493 FRYLO94915 3013 aa7.27□□□□□ -1.25
RAPGEF3-204ENST00000405493 Q8N1X5 172 aa7.27□□□□□ -1.25
RAPGEF3-204ENST00000405493 KRTAP1-5Q9BYS1 174 aa7.27□□□□□ -1.25
RAPGEF3-204ENST00000405493 SEC61BP60468 96 aaKnown RBP7.27□□□□□ -1.25
RAPGEF3-204ENST00000405493 KRTAP10-1P60331 282 aa7.26□□□□□ -1.25
RAPGEF3-204ENST00000405493 SPINT4Q6UDR6 99 aa7.26□□□□□ -1.25
RAPGEF3-204ENST00000405493 MAP1AP78559 2803 aaPredicted RBP7.26□□□□□ -1.25
RAPGEF3-204ENST00000405493 NOTCH1P46531 2555 aa7.26□□□□□ -1.25
RAPGEF3-204ENST00000405493 FLG2Q5D862 2391 aaPredicted RBP7.25□□□□□ -1.25
RAPGEF3-204ENST00000405493 DMXL2Q8TDJ6 3036 aa7.24□□□□□ -1.25
RAPGEF3-204ENST00000405493 FLNCQ14315 2725 aa7.24□□□□□ -1.25
RAPGEF3-204ENST00000405493 CELSR3Q9NYQ7 3312 aa7.23□□□□□ -1.25
RAPGEF3-204ENST00000405493 KRTAP10-2P60368 255 aa7.23□□□□□ -1.25
RAPGEF3-204ENST00000405493 Q75L30 129 aa7.22□□□□□ -1.25
RAPGEF3-204ENST00000405493 FRYQ5TBA9 3013 aa7.22□□□□□ -1.25
RAPGEF3-204ENST00000405493 Q8N9P0 234 aaPredicted RBP7.22□□□□□ -1.25
RAPGEF3-204ENST00000405493 M0R2T5 61 aa7.21□□□□□ -1.25
RAPGEF3-204ENST00000405493 SPRR1AP35321 89 aa7.19□□□□□ -1.26
RAPGEF3-204ENST00000405493 BOD1L1Q8NFC6 3051 aa7.18□□□□□ -1.26
RAPGEF3-204ENST00000405493 FREM2Q5SZK8 3169 aa7.18□□□□□ -1.26
RAPGEF3-204ENST00000405493 DMXL1Q9Y485 3027 aa7.18□□□□□ -1.26
RAPGEF3-204ENST00000405493 A0A0D9SG42 100 aa7.16□□□□□ -1.26
RAPGEF3-204ENST00000405493 SPRR1BP22528 89 aa7.16□□□□□ -1.26
RAPGEF3-204ENST00000405493 ATMQ13315 3056 aa7.16□□□□□ -1.26
RAPGEF3-204ENST00000405493 Q5VV11 94 aa7.16□□□□□ -1.26
RAPGEF3-204ENST00000405493 KRTAP26-1Q6PEX3 210 aa7.16□□□□□ -1.26
RAPGEF3-204ENST00000405493 CRIPTQ9P021 101 aa7.16□□□□□ -1.26
RAPGEF3-204ENST00000405493 LINC01558Q9Y6Z2 57 aa7.16□□□□□ -1.26
RAPGEF3-204ENST00000405493 LINC01554Q52M75 96 aa7.15□□□□□ -1.27
RAPGEF3-204ENST00000405493 ITPR2Q14571 2701 aa7.14□□□□□ -1.27
RAPGEF3-204ENST00000405493 MMP24-AS1A0A0U1RRL7 71 aa7.12□□□□□ -1.27
RAPGEF3-204ENST00000405493 DMBT1Q9UGM3 2413 aaPredicted RBP7.12□□□□□ -1.27
RAPGEF3-204ENST00000405493 KMT2BQ9UMN6 2715 aaPredicted RBP7.11□□□□□ -1.27
RAPGEF3-204ENST00000405493 COL12A1Q99715 3063 aa7.11□□□□□ -1.27
RAPGEF3-204ENST00000405493 SPEGQ15772 3267 aa7.11□□□□□ -1.27
RAPGEF3-204ENST00000405493 NSD1Q96L73 2696 aaPredicted RBP7.11□□□□□ -1.27
RAPGEF3-204ENST00000405493 HRES1P13985 223 aa7.09□□□□□ -1.27
RAPGEF3-204ENST00000405493 NBEAL1Q6ZS30 2694 aa7.08□□□□□ -1.28
RAPGEF3-204ENST00000405493 ADGRG4Q8IZF6 3080 aa7.08□□□□□ -1.28
RAPGEF3-204ENST00000405493 UBR5O95071 2799 aaPredicted RBP7.07□□□□□ -1.28
RAPGEF3-204ENST00000405493 LINC00472Q9H8W2 130 aa7.06□□□□□ -1.28
RAPGEF3-204ENST00000405493 ZCCHC13Q8WW36 166 aaKnown RBP7.05□□□□□ -1.28
RAPGEF3-204ENST00000405493 KALRNO60229 2985 aa7.05□□□□□ -1.28
RAPGEF3-204ENST00000405493 HIVEP1P15822 2718 aa7.05□□□□□ -1.28
RAPGEF3-204ENST00000405493 Q6ZRN7 208 aaPredicted RBP7.03□□□□□ -1.28
RAPGEF3-204ENST00000405493 LINC00483Q53H64 154 aa7.03□□□□□ -1.28
RAPGEF3-204ENST00000405493 ZZEF1O43149 2961 aa7.02□□□□□ -1.29
RAPGEF3-204ENST00000405493 SPINK7P58062 85 aa7.02□□□□□ -1.29
RAPGEF3-204ENST00000405493 PRAC1Q96KF2 57 aa7.01□□□□□ -1.29
RAPGEF3-204ENST00000405493 CSAG1Q6PB30 78 aa7.01□□□□□ -1.29
RAPGEF3-204ENST00000405493 NBEAQ8NFP9 2946 aa7□□□□□ -1.29
RAPGEF3-204ENST00000405493 Q5W150 140 aa6.98□□□□□ -1.29
RAPGEF3-204ENST00000405493 A0A1B0GU33 70 aa6.97□□□□□ -1.29
RAPGEF3-204ENST00000405493 USP34Q70CQ2 3546 aa6.97□□□□□ -1.29
RAPGEF3-204ENST00000405493 STAB2Q8WWQ8 2551 aa6.97□□□□□ -1.29
RAPGEF3-204ENST00000405493 LOC400499M0QZD8 3231 aa6.97□□□□□ -1.29
RAPGEF3-204ENST00000405493 RPS29P62273 56 aaKnown RBP6.97□□□□□ -1.29
RAPGEF3-204ENST00000405493 ITPR1Q14643 2758 aa6.96□□□□□ -1.3
RAPGEF3-204ENST00000405493 KRTAP4-16G5E9R7 235 aaPredicted RBP6.95□□□□□ -1.3
RAPGEF3-204ENST00000405493 S4R3F8 94 aa6.95□□□□□ -1.3
RAPGEF3-204ENST00000405493 KRTAP29-1A8MX34 341 aaPredicted RBP6.94□□□□□ -1.3
RAPGEF3-204ENST00000405493 TACC2O95359 2948 aa6.94□□□□□ -1.3
RAPGEF3-204ENST00000405493 PANO1I0J062 215 aa6.94□□□□□ -1.3
RAPGEF3-204ENST00000405493 MYO15AQ9UKN7 3530 aa6.93□□□□□ -1.3
RAPGEF3-204ENST00000405493 UTP20O75691 2785 aaKnown RBP6.93□□□□□ -1.3
RAPGEF3-204ENST00000405493 MUC3AQ02505 3323 aa6.92□□□□□ -1.3
RAPGEF3-204ENST00000405493 LRBAP50851 2863 aa6.92□□□□□ -1.3
RAPGEF3-204ENST00000405493 TENM4Q6N022 2769 aa6.92□□□□□ -1.3
RAPGEF3-204ENST00000405493 NBEAL2Q6ZNJ1 2754 aa6.92□□□□□ -1.3
RAPGEF3-204ENST00000405493 APCP25054 2843 aa6.9□□□□□ -1.31
RAPGEF3-204ENST00000405493 H3BS24 57 aa6.89□□□□□ -1.31
RAPGEF3-204ENST00000405493 CAMK2N1Q7Z7J9 78 aa6.89□□□□□ -1.31
RAPGEF3-204ENST00000405493 DMAC1Q96GE9 116 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms