RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 ATP5EP2Q5VTU8 51 aa0.3□□□□□ -2.36
HMGB1P17-201ENST00000403495 HEPN1Q6WQI6 88 aa0.3□□□□□ -2.36
HMGB1P17-201ENST00000403495 MKI67P46013 3256 aaKnown RBP0.3□□□□□ -2.36
HMGB1P17-201ENST00000403495 RGPD2P0DJD1 1756 aa0.29□□□□□ -2.36
HMGB1P17-201ENST00000403495 RELNP78509 3460 aa0.29□□□□□ -2.36
HMGB1P17-201ENST00000403495 ABCC1P33527 1531 aa0.29□□□□□ -2.36
HMGB1P17-201ENST00000403495 QSER1Q2KHR3 1735 aa0.29□□□□□ -2.36
HMGB1P17-201ENST00000403495 LAMA3Q16787 3333 aa0.29□□□□□ -2.36
HMGB1P17-201ENST00000403495 DMXL2Q8TDJ6 3036 aa0.29□□□□□ -2.36
HMGB1P17-201ENST00000403495 RRBP1Q9P2E9 1410 aaKnown RBP0.29□□□□□ -2.36
HMGB1P17-201ENST00000403495 USP34Q70CQ2 3546 aa0.29□□□□□ -2.36
HMGB1P17-201ENST00000403495 NF1P21359 2839 aa0.28□□□□□ -2.36
HMGB1P17-201ENST00000403495 MGAQ8IWI9 3026 aa0.28□□□□□ -2.36
HMGB1P17-201ENST00000403495 A0A087WXM4 84 aa0.28□□□□□ -2.36
HMGB1P17-201ENST00000403495 LOC730098B7Z3J9 87 aa0.28□□□□□ -2.36
HMGB1P17-201ENST00000403495 APC2O95996 2303 aa0.28□□□□□ -2.36
HMGB1P17-201ENST00000403495 MAGI3Q5TCQ9 1506 aa0.28□□□□□ -2.37
HMGB1P17-201ENST00000403495 DNAH7Q8WXX0 4024 aa0.28□□□□□ -2.37
HMGB1P17-201ENST00000403495 CFAP74Q9C0B2 1584 aa0.28□□□□□ -2.37
HMGB1P17-201ENST00000403495 CACNA1CQ13936 2221 aa0.28□□□□□ -2.37
HMGB1P17-201ENST00000403495 PIK3C2BO00750 1634 aa0.27□□□□□ -2.37
HMGB1P17-201ENST00000403495 PREX1Q8TCU6 1659 aa0.27□□□□□ -2.37
HMGB1P17-201ENST00000403495 ASPMQ8IZT6 3477 aa0.27□□□□□ -2.37
HMGB1P17-201ENST00000403495 VPS13CQ709C8 3753 aa0.27□□□□□ -2.37
HMGB1P17-201ENST00000403495 DEFB121Q5J5C9 76 aa0.27□□□□□ -2.37
HMGB1P17-201ENST00000403495 CDKN2A-AS1Q9UH64 79 aa0.27□□□□□ -2.37
HMGB1P17-201ENST00000403495 CEP170BQ9Y4F5 1589 aaPredicted RBP0.27□□□□□ -2.37
HMGB1P17-201ENST00000403495 KIF20BQ96Q89 1820 aa0.27□□□□□ -2.37
HMGB1P17-201ENST00000403495 CFAP54Q96N23 3096 aa0.27□□□□□ -2.37
HMGB1P17-201ENST00000403495 ACACAQ13085 2346 aa0.26□□□□□ -2.37
HMGB1P17-201ENST00000403495 LAMA1P25391 3075 aa0.26□□□□□ -2.37
HMGB1P17-201ENST00000403495 UMAD1C9J7I0 102 aa0.26□□□□□ -2.37
HMGB1P17-201ENST00000403495 IFI6P09912 130 aa0.26□□□□□ -2.37
HMGB1P17-201ENST00000403495 LELP1Q5T871 98 aa0.26□□□□□ -2.37
HMGB1P17-201ENST00000403495 LRP2P98164 4655 aa0.26□□□□□ -2.37
HMGB1P17-201ENST00000403495 COL14A1Q05707 1796 aaKnown RBP0.26□□□□□ -2.37
HMGB1P17-201ENST00000403495 HTTP42858 3142 aa0.26□□□□□ -2.37
HMGB1P17-201ENST00000403495 LOC400499M0QZD8 3231 aa0.26□□□□□ -2.37
HMGB1P17-201ENST00000403495 BRCA2P51587 3418 aa0.25□□□□□ -2.37
HMGB1P17-201ENST00000403495 CENPFP49454 3210 aa0.25□□□□□ -2.37
HMGB1P17-201ENST00000403495 POLR1AO95602 1720 aaPredicted RBP0.25□□□□□ -2.37
HMGB1P17-201ENST00000403495 ZNF831Q5JPB2 1677 aa0.25□□□□□ -2.37
HMGB1P17-201ENST00000403495 ANKARQ7Z5J8 1434 aa0.25□□□□□ -2.37
HMGB1P17-201ENST00000403495 IFI27P40305 119 aaPredicted RBP0.25□□□□□ -2.37
HMGB1P17-201ENST00000403495 C18orf32Q8TCD1 76 aa0.25□□□□□ -2.37
HMGB1P17-201ENST00000403495 DMXL1Q9Y485 3027 aa0.25□□□□□ -2.37
HMGB1P17-201ENST00000403495 TACC2O95359 2948 aa0.25□□□□□ -2.37
HMGB1P17-201ENST00000403495 HECTD4Q9Y4D8 3996 aa0.25□□□□□ -2.37
HMGB1P17-201ENST00000403495 PTPRQQ9UMZ3 2332 aa0.25□□□□□ -2.37
HMGB1P17-201ENST00000403495 WNK2Q9Y3S1 2297 aa0.25□□□□□ -2.37
HMGB1P17-201ENST00000403495 CUBNO60494 3623 aa0.25□□□□□ -2.37
HMGB1P17-201ENST00000403495 SPTBN5Q9NRC6 3674 aaKnown RBP0.24□□□□□ -2.37
HMGB1P17-201ENST00000403495 PRM1P04553 51 aa0.24□□□□□ -2.37
HMGB1P17-201ENST00000403495 SMIM13P0DJ93 91 aa0.24□□□□□ -2.37
HMGB1P17-201ENST00000403495 COX6B2Q6YFQ2 88 aa0.24□□□□□ -2.37
HMGB1P17-201ENST00000403495 MYO15AQ9UKN7 3530 aa0.24□□□□□ -2.37
HMGB1P17-201ENST00000403495 BCORQ6W2J9 1755 aa0.24□□□□□ -2.37
HMGB1P17-201ENST00000403495 ZZEF1O43149 2961 aa0.24□□□□□ -2.37
HMGB1P17-201ENST00000403495 HUWE1Q7Z6Z7 4374 aaKnown RBP0.23□□□□□ -2.37
HMGB1P17-201ENST00000403495 FRYQ5TBA9 3013 aa0.23□□□□□ -2.37
HMGB1P17-201ENST00000403495 CSMD2Q7Z408 3487 aa0.23□□□□□ -2.37
HMGB1P17-201ENST00000403495 NREPQ16612 68 aa0.23□□□□□ -2.37
HMGB1P17-201ENST00000403495 WFDC13Q8IUB5 93 aa0.23□□□□□ -2.37
HMGB1P17-201ENST00000403495 LRP1BQ9NZR2 4599 aa0.23□□□□□ -2.37
HMGB1P17-201ENST00000403495 WDFY3Q8IZQ1 3526 aa0.23□□□□□ -2.37
HMGB1P17-201ENST00000403495 CHD7Q9P2D1 2997 aa0.23□□□□□ -2.37
HMGB1P17-201ENST00000403495 NWD1Q149M9 1564 aa0.23□□□□□ -2.37
HMGB1P17-201ENST00000403495 VPS13AQ96RL7 3174 aa0.22□□□□□ -2.37
HMGB1P17-201ENST00000403495 CCDC88BA6NC98 1476 aa0.22□□□□□ -2.37
HMGB1P17-201ENST00000403495 DNAH14Q0VDD8 3507 aa0.22□□□□□ -2.37
HMGB1P17-201ENST00000403495 TRIOO75962 3097 aa0.22□□□□□ -2.37
HMGB1P17-201ENST00000403495 MYCBP2O75592 4640 aa0.22□□□□□ -2.37
HMGB1P17-201ENST00000403495 PLCE1Q9P212 2302 aa0.22□□□□□ -2.37
HMGB1P17-201ENST00000403495 ANKRD36A6QL64 1941 aa0.22□□□□□ -2.37
HMGB1P17-201ENST00000403495 DOPEY2Q9Y3R5 2298 aa0.22□□□□□ -2.37
HMGB1P17-201ENST00000403495 UBR3Q6ZT12 1888 aa0.22□□□□□ -2.37
HMGB1P17-201ENST00000403495 STARD9Q9P2P6 4700 aa0.22□□□□□ -2.37
HMGB1P17-201ENST00000403495 ATMQ13315 3056 aa0.22□□□□□ -2.37
HMGB1P17-201ENST00000403495 LTN1O94822 1766 aa0.22□□□□□ -2.37
HMGB1P17-201ENST00000403495 DNAJC13O75165 2243 aa0.21□□□□□ -2.38
HMGB1P17-201ENST00000403495 ADGRG4Q8IZF6 3080 aa0.21□□□□□ -2.38
HMGB1P17-201ENST00000403495 MUC3AQ02505 3323 aa0.21□□□□□ -2.38
HMGB1P17-201ENST00000403495 NDUFA3O95167 84 aa0.21□□□□□ -2.38
HMGB1P17-201ENST00000403495 MAP3K1Q13233 1512 aa0.21□□□□□ -2.38
HMGB1P17-201ENST00000403495 RGPD8O14715 1765 aaPredicted RBP0.21□□□□□ -2.38
HMGB1P17-201ENST00000403495 RGPD5Q99666 1765 aa0.21□□□□□ -2.38
HMGB1P17-201ENST00000403495 SVEP1Q4LDE5 3571 aa0.21□□□□□ -2.38
HMGB1P17-201ENST00000403495 DYNC1H1Q14204 4646 aaKnown RBP0.21□□□□□ -2.38
HMGB1P17-201ENST00000403495 ALMS1Q8TCU4 4167 aa0.2□□□□□ -2.38
HMGB1P17-201ENST00000403495 PTPN23Q9H3S7 1636 aa0.2□□□□□ -2.38
HMGB1P17-201ENST00000403495 FAT2Q9NYQ8 4349 aa0.2□□□□□ -2.38
HMGB1P17-201ENST00000403495 ABCA8O94911 1581 aa0.2□□□□□ -2.38
HMGB1P17-201ENST00000403495 SMG1Q96Q15 3661 aaKnown RBP0.2□□□□□ -2.38
HMGB1P17-201ENST00000403495 LYSTQ99698 3801 aa0.2□□□□□ -2.38
HMGB1P17-201ENST00000403495 DOT1LQ8TEK3 1739 aa0.2□□□□□ -2.38
HMGB1P17-201ENST00000403495 PRUNE2Q8WUY3 3088 aa0.2□□□□□ -2.38
HMGB1P17-201ENST00000403495 TNRC6CQ9HCJ0 1690 aaKnown RBP0.2□□□□□ -2.38
HMGB1P17-201ENST00000403495 PRKDCP78527 4128 aaKnown RBP0.2□□□□□ -2.38
HMGB1P17-201ENST00000403495 PKD1P98161 4303 aa0.2□□□□□ -2.38
HMGB1P17-201ENST00000403495 LPAP08519 4548 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms