RNA–Protein interactions for RNA: ENST00000401874.6

TSC2-204, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSC2, Length 5,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-204ENST00000401874 A0A1B0GU33 70 aa10.21□□□□□ -0.78
TSC2-204ENST00000401874 Q5VV11 94 aa10.21□□□□□ -0.78
TSC2-204ENST00000401874 H3BS24 57 aa10.2□□□□□ -0.78
TSC2-204ENST00000401874 USP24Q9UPU5 2620 aa10.19□□□□□ -0.78
TSC2-204ENST00000401874 ZCCHC13Q8WW36 166 aaKnown RBP10.18□□□□□ -0.78
TSC2-204ENST00000401874 ITPR3Q14573 2671 aa10.18□□□□□ -0.78
TSC2-204ENST00000401874 OXTP01178 125 aa10.17□□□□□ -0.78
TSC2-204ENST00000401874 MGAM2Q2M2H8 2515 aa10.16□□□□□ -0.78
TSC2-204ENST00000401874 Q5W150 140 aa10.16□□□□□ -0.78
TSC2-204ENST00000401874 LINC01554Q52M75 96 aa10.15□□□□□ -0.79
TSC2-204ENST00000401874 KRTAP1-5Q9BYS1 174 aa10.12□□□□□ -0.79
TSC2-204ENST00000401874 KRTAP4-16G5E9R7 235 aaPredicted RBP10.09□□□□□ -0.79
TSC2-204ENST00000401874 ATRQ13535 2644 aa10.09□□□□□ -0.79
TSC2-204ENST00000401874 TRIOO75962 3097 aa10.09□□□□□ -0.79
TSC2-204ENST00000401874 FLNBO75369 2602 aaKnown RBP10.09□□□□□ -0.79
TSC2-204ENST00000401874 SPINK7P58062 85 aa10.06□□□□□ -0.8
TSC2-204ENST00000401874 LINC00483Q53H64 154 aa10.06□□□□□ -0.8
TSC2-204ENST00000401874 PRUNE2Q8WUY3 3088 aa10.05□□□□□ -0.8
TSC2-204ENST00000401874 Q6ZSA8 131 aa10.05□□□□□ -0.8
TSC2-204ENST00000401874 A0A0C4DFX4 3053 aa10.05□□□□□ -0.8
TSC2-204ENST00000401874 DMAC1Q96GE9 116 aa10.04□□□□□ -0.8
TSC2-204ENST00000401874 LAMA1P25391 3075 aa10.03□□□□□ -0.8
TSC2-204ENST00000401874 LUZP6Q538Z0 58 aa10.03□□□□□ -0.8
TSC2-204ENST00000401874 EYSQ5T1H1 3165 aa10.02□□□□□ -0.8
TSC2-204ENST00000401874 TNRC18O15417 2968 aaPredicted RBP10.01□□□□□ -0.81
TSC2-204ENST00000401874 KRTAP29-1A8MX34 341 aaPredicted RBP10□□□□□ -0.81
TSC2-204ENST00000401874 Q6ZR54 194 aa10□□□□□ -0.81
TSC2-204ENST00000401874 PRAC1Q96KF2 57 aa9.99□□□□□ -0.81
TSC2-204ENST00000401874 USP34Q70CQ2 3546 aa9.97□□□□□ -0.81
TSC2-204ENST00000401874 HELZ2Q9BYK8 2649 aaKnown RBP9.95□□□□□ -0.82
TSC2-204ENST00000401874 S4R3F8 94 aa9.95□□□□□ -0.82
TSC2-204ENST00000401874 VCANP13611 3396 aa9.93□□□□□ -0.82
TSC2-204ENST00000401874 MAST4O15021 2626 aa9.92□□□□□ -0.82
TSC2-204ENST00000401874 CSAG1Q6PB30 78 aa9.91□□□□□ -0.82
TSC2-204ENST00000401874 CFAP46Q8IYW2 2715 aa9.9□□□□□ -0.82
TSC2-204ENST00000401874 CAMK2N1Q7Z7J9 78 aa9.87□□□□□ -0.83
TSC2-204ENST00000401874 CFAP54Q96N23 3096 aa9.86□□□□□ -0.83
TSC2-204ENST00000401874 MGAQ8IWI9 3026 aa9.85□□□□□ -0.83
TSC2-204ENST00000401874 PANO1I0J062 215 aa9.85□□□□□ -0.83
TSC2-204ENST00000401874 ZNF292O60281 2723 aa9.84□□□□□ -0.83
TSC2-204ENST00000401874 KRTAP10-1P60331 282 aa9.83□□□□□ -0.84
TSC2-204ENST00000401874 MYO15AQ9UKN7 3530 aa9.82□□□□□ -0.84
TSC2-204ENST00000401874 CENPEQ02224 2701 aa9.82□□□□□ -0.84
TSC2-204ENST00000401874 ASB16-AS1Q495Z4 193 aa9.81□□□□□ -0.84
TSC2-204ENST00000401874 A0A0A0MQY5 61 aa9.8□□□□□ -0.84
TSC2-204ENST00000401874 LCE6AA0A183 80 aa9.8□□□□□ -0.84
TSC2-204ENST00000401874 KRTAP10-2P60368 255 aa9.8□□□□□ -0.84
TSC2-204ENST00000401874 SPEGQ15772 3267 aa9.8□□□□□ -0.84
TSC2-204ENST00000401874 CHD6Q8TD26 2715 aa9.79□□□□□ -0.84
TSC2-204ENST00000401874 H1FX-AS1Q4G0G2 97 aa9.78□□□□□ -0.84
TSC2-204ENST00000401874 RPL37P61927 97 aaKnown RBP9.77□□□□□ -0.85
TSC2-204ENST00000401874 ROMO1P60602 79 aa9.74□□□□□ -0.85
TSC2-204ENST00000401874 GCN1Q92616 2671 aaKnown RBP9.73□□□□□ -0.85
TSC2-204ENST00000401874 AKAP13Q12802 2813 aa9.72□□□□□ -0.85
TSC2-204ENST00000401874 KRTAP7-1Q8IUC3 87 aa9.71□□□□□ -0.85
TSC2-204ENST00000401874 WDFY3Q8IZQ1 3526 aa9.7□□□□□ -0.86
TSC2-204ENST00000401874 A0A087X002 238 aa9.7□□□□□ -0.86
TSC2-204ENST00000401874 NOTCH2NLQ7Z3S9 236 aa9.7□□□□□ -0.86
TSC2-204ENST00000401874 KRTAP11-1Q8IUC1 163 aa9.69□□□□□ -0.86
TSC2-204ENST00000401874 R4GN34 69 aa9.69□□□□□ -0.86
TSC2-204ENST00000401874 SPATA8Q6RVD6 105 aa9.69□□□□□ -0.86
TSC2-204ENST00000401874 UNC79Q9P2D8 2635 aa9.68□□□□□ -0.86
TSC2-204ENST00000401874 VPS13AQ96RL7 3174 aa9.66□□□□□ -0.86
TSC2-204ENST00000401874 Q5VSD8 79 aa9.65□□□□□ -0.86
TSC2-204ENST00000401874 SEC61BP60468 96 aaKnown RBP9.65□□□□□ -0.87
TSC2-204ENST00000401874 COL6A3P12111 3177 aa9.63□□□□□ -0.87
TSC2-204ENST00000401874 Q6ZRN7 208 aaPredicted RBP9.63□□□□□ -0.87
TSC2-204ENST00000401874 FRYLO94915 3013 aa9.63□□□□□ -0.87
TSC2-204ENST00000401874 FREM2Q5SZK8 3169 aa9.62□□□□□ -0.87
TSC2-204ENST00000401874 DMDP11532 3685 aa9.61□□□□□ -0.87
TSC2-204ENST00000401874 TEX15Q9BXT5 2789 aa9.6□□□□□ -0.87
TSC2-204ENST00000401874 RPS29P62273 56 aaKnown RBP9.6□□□□□ -0.87
TSC2-204ENST00000401874 KRTAP13-1Q8IUC0 172 aa9.6□□□□□ -0.87
TSC2-204ENST00000401874 NBEAL1Q6ZS30 2694 aa9.6□□□□□ -0.87
TSC2-204ENST00000401874 A6NN06 94 aa9.59□□□□□ -0.87
TSC2-204ENST00000401874 M0R2T5 61 aa9.58□□□□□ -0.88
TSC2-204ENST00000401874 WDFY4Q6ZS81 3184 aa9.58□□□□□ -0.88
TSC2-204ENST00000401874 M0QZ58 72 aa9.54□□□□□ -0.88
TSC2-204ENST00000401874 NBEAL2Q6ZNJ1 2754 aa9.53□□□□□ -0.88
TSC2-204ENST00000401874 STAB1Q9NY15 2570 aa9.52□□□□□ -0.89
TSC2-204ENST00000401874 SETXQ7Z333 2677 aaKnown RBP9.52□□□□□ -0.89
TSC2-204ENST00000401874 ADM2Q7Z4H4 148 aa9.5□□□□□ -0.89
TSC2-204ENST00000401874 CELSR3Q9NYQ7 3312 aa9.5□□□□□ -0.89
TSC2-204ENST00000401874 IGSF10Q6WRI0 2623 aa9.5□□□□□ -0.89
TSC2-204ENST00000401874 FRYQ5TBA9 3013 aa9.49□□□□□ -0.89
TSC2-204ENST00000401874 TEP1Q99973 2627 aaKnown RBP9.49□□□□□ -0.89
TSC2-204ENST00000401874 KRTAP16-1A8MUX0 517 aa9.46□□□□□ -0.89
TSC2-204ENST00000401874 COL6A5A8TX70 2615 aa9.46□□□□□ -0.9
TSC2-204ENST00000401874 DSPP15924 2871 aaKnown RBP9.45□□□□□ -0.9
TSC2-204ENST00000401874 KRTAP13-2Q52LG2 175 aa9.45□□□□□ -0.9
TSC2-204ENST00000401874 NOTCH1P46531 2555 aa9.44□□□□□ -0.9
TSC2-204ENST00000401874 KRTAP25-1Q3LHN0 102 aa9.4□□□□□ -0.9
TSC2-204ENST00000401874 MUC3AQ02505 3323 aa9.36□□□□□ -0.91
TSC2-204ENST00000401874 A8MU10 97 aa9.35□□□□□ -0.91
TSC2-204ENST00000401874 UBR5O95071 2799 aaPredicted RBP9.33□□□□□ -0.92
TSC2-204ENST00000401874 DMBT1Q9UGM3 2413 aaPredicted RBP9.32□□□□□ -0.92
TSC2-204ENST00000401874 MAP1AP78559 2803 aaPredicted RBP9.32□□□□□ -0.92
TSC2-204ENST00000401874 LOC400499M0QZD8 3231 aa9.3□□□□□ -0.92
TSC2-204ENST00000401874 DMXL1Q9Y485 3027 aa9.29□□□□□ -0.92
TSC2-204ENST00000401874 NSD1Q96L73 2696 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms