RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 KRTAP29-1A8MX34 341 aaPredicted RBP5.12□□□□□ -1.59
CHD8-201ENST00000399982 CEP295Q9C0D2 2601 aa5.11□□□□□ -1.59
CHD8-201ENST00000399982 SPTBN4Q9H254 2564 aa5.08□□□□□ -1.6
CHD8-201ENST00000399982 KRTAP26-1Q6PEX3 210 aa5.06□□□□□ -1.6
CHD8-201ENST00000399982 PLAC8Q9NZF1 115 aa5.05□□□□□ -1.6
CHD8-201ENST00000399982 C10orf95Q9H7T3 257 aa5.05□□□□□ -1.6
CHD8-201ENST00000399982 NDUFAF8A1L188 74 aa5.03□□□□□ -1.6
CHD8-201ENST00000399982 BPTFQ12830 3046 aa5.02□□□□□ -1.61
CHD8-201ENST00000399982 KRTAP10-3P60369 221 aa5.02□□□□□ -1.61
CHD8-201ENST00000399982 P0C880 135 aa5□□□□□ -1.61
CHD8-201ENST00000399982 USP24Q9UPU5 2620 aa5□□□□□ -1.61
CHD8-201ENST00000399982 KRTAP4-16G5E9R7 235 aaPredicted RBP4.99□□□□□ -1.61
CHD8-201ENST00000399982 EPG5Q9HCE0 2579 aa4.99□□□□□ -1.61
CHD8-201ENST00000399982 PANO1I0J062 215 aa4.98□□□□□ -1.61
CHD8-201ENST00000399982 SRCAPQ6ZRS2 3230 aa4.97□□□□□ -1.61
CHD8-201ENST00000399982 A8MUU9 505 aa4.95□□□□□ -1.62
CHD8-201ENST00000399982 RPS29P62273 56 aaKnown RBP4.92□□□□□ -1.62
CHD8-201ENST00000399982 NOTCH2NLQ7Z3S9 236 aa4.92□□□□□ -1.62
CHD8-201ENST00000399982 TNP1P09430 55 aa4.91□□□□□ -1.62
CHD8-201ENST00000399982 A8MU10 97 aa4.9□□□□□ -1.63
CHD8-201ENST00000399982 DMBT1Q9UGM3 2413 aaPredicted RBP4.87□□□□□ -1.63
CHD8-201ENST00000399982 PP632Q6XCG6 107 aa4.86□□□□□ -1.63
CHD8-201ENST00000399982 FLNBO75369 2602 aaKnown RBP4.86□□□□□ -1.63
CHD8-201ENST00000399982 KRTAP11-1Q8IUC1 163 aa4.86□□□□□ -1.63
CHD8-201ENST00000399982 MGAM2Q2M2H8 2515 aa4.83□□□□□ -1.64
CHD8-201ENST00000399982 MAST4O15021 2626 aa4.82□□□□□ -1.64
CHD8-201ENST00000399982 CENPEQ02224 2701 aa4.81□□□□□ -1.64
CHD8-201ENST00000399982 NBEAL1Q6ZS30 2694 aa4.8□□□□□ -1.64
CHD8-201ENST00000399982 HECTD1Q9ULT8 2610 aa4.8□□□□□ -1.64
CHD8-201ENST00000399982 KRTAP1-3Q8IUG1 177 aa4.79□□□□□ -1.64
CHD8-201ENST00000399982 KRTAP10-8P60410 259 aa4.79□□□□□ -1.64
CHD8-201ENST00000399982 KRTAP10-1P60331 282 aa4.79□□□□□ -1.64
CHD8-201ENST00000399982 ATRQ13535 2644 aa4.78□□□□□ -1.64
CHD8-201ENST00000399982 KRTAP1-1Q07627 177 aa4.78□□□□□ -1.64
CHD8-201ENST00000399982 KRTAP10-2P60368 255 aa4.76□□□□□ -1.65
CHD8-201ENST00000399982 FLNAP21333 2647 aaKnown RBP4.75□□□□□ -1.65
CHD8-201ENST00000399982 PRRC2CQ9Y520 2896 aaKnown RBP4.74□□□□□ -1.65
CHD8-201ENST00000399982 STAB1Q9NY15 2570 aa4.73□□□□□ -1.65
CHD8-201ENST00000399982 KRTAP13-1Q8IUC0 172 aa4.69□□□□□ -1.66
CHD8-201ENST00000399982 CFAP46Q8IYW2 2715 aa4.68□□□□□ -1.66
CHD8-201ENST00000399982 UNC79Q9P2D8 2635 aa4.68□□□□□ -1.66
CHD8-201ENST00000399982 KRTAP1-5Q9BYS1 174 aa4.67□□□□□ -1.66
CHD8-201ENST00000399982 A0A1B0GVY2 172 aa4.67□□□□□ -1.66
CHD8-201ENST00000399982 HELZ2Q9BYK8 2649 aaKnown RBP4.67□□□□□ -1.66
CHD8-201ENST00000399982 AKAP13Q12802 2813 aa4.66□□□□□ -1.66
CHD8-201ENST00000399982 ITPR3Q14573 2671 aa4.66□□□□□ -1.66
CHD8-201ENST00000399982 CENPFP49454 3210 aa4.65□□□□□ -1.67
CHD8-201ENST00000399982 GCN1Q92616 2671 aaKnown RBP4.63□□□□□ -1.67
CHD8-201ENST00000399982 NOTCH1P46531 2555 aa4.63□□□□□ -1.67
CHD8-201ENST00000399982 STAB2Q8WWQ8 2551 aa4.6□□□□□ -1.67
CHD8-201ENST00000399982 Q6ZRN7 208 aaPredicted RBP4.6□□□□□ -1.67
CHD8-201ENST00000399982 PRO2289Q9P1D8 64 aa4.59□□□□□ -1.68
CHD8-201ENST00000399982 CHD6Q8TD26 2715 aa4.58□□□□□ -1.68
CHD8-201ENST00000399982 SETXQ7Z333 2677 aaKnown RBP4.57□□□□□ -1.68
CHD8-201ENST00000399982 H0YAA0 97 aa4.57□□□□□ -1.68
CHD8-201ENST00000399982 KRTAP7-1Q8IUC3 87 aa4.57□□□□□ -1.68
CHD8-201ENST00000399982 KRTAP10-10P60014 251 aa4.53□□□□□ -1.68
CHD8-201ENST00000399982 EP400Q96L91 3159 aa4.52□□□□□ -1.69
CHD8-201ENST00000399982 COL6A5A8TX70 2615 aa4.51□□□□□ -1.69
CHD8-201ENST00000399982 KRTAP13-2Q52LG2 175 aa4.51□□□□□ -1.69
CHD8-201ENST00000399982 C5orf42Q9H799 3197 aa4.5□□□□□ -1.69
CHD8-201ENST00000399982 KMT2BQ9UMN6 2715 aaPredicted RBP4.49□□□□□ -1.69
CHD8-201ENST00000399982 DNAH12Q6ZR08 3092 aa4.47□□□□□ -1.69
CHD8-201ENST00000399982 TEX15Q9BXT5 2789 aa4.47□□□□□ -1.69
CHD8-201ENST00000399982 CEP350Q5VT06 3117 aa4.45□□□□□ -1.7
CHD8-201ENST00000399982 NSD1Q96L73 2696 aaPredicted RBP4.45□□□□□ -1.7
CHD8-201ENST00000399982 TEP1Q99973 2627 aaKnown RBP4.44□□□□□ -1.7
CHD8-201ENST00000399982 BAHCC1Q9P281 2608 aa4.43□□□□□ -1.7
CHD8-201ENST00000399982 GOLGB1Q14789 3259 aaKnown RBP4.41□□□□□ -1.7
CHD8-201ENST00000399982 A0A0C4DFX4 3053 aa4.39□□□□□ -1.71
CHD8-201ENST00000399982 ITPR1Q14643 2758 aa4.37□□□□□ -1.71
CHD8-201ENST00000399982 KRTAP13-3Q3SY46 172 aa4.37□□□□□ -1.71
CHD8-201ENST00000399982 NBEAL2Q6ZNJ1 2754 aa4.37□□□□□ -1.71
CHD8-201ENST00000399982 REV3LO60673 3130 aa4.36□□□□□ -1.71
CHD8-201ENST00000399982 MAP1AP78559 2803 aaPredicted RBP4.35□□□□□ -1.71
CHD8-201ENST00000399982 PCNTO95613 3336 aa4.35□□□□□ -1.71
CHD8-201ENST00000399982 KRTAP12-2P59991 146 aa4.35□□□□□ -1.71
CHD8-201ENST00000399982 INE1O15225 51 aa4.34□□□□□ -1.71
CHD8-201ENST00000399982 UTRNP46939 3433 aa4.32□□□□□ -1.72
CHD8-201ENST00000399982 IGSF10Q6WRI0 2623 aa4.32□□□□□ -1.72
CHD8-201ENST00000399982 APCP25054 2843 aa4.31□□□□□ -1.72
CHD8-201ENST00000399982 ZNF292O60281 2723 aa4.3□□□□□ -1.72
CHD8-201ENST00000399982 XP32Q5T750 250 aa4.3□□□□□ -1.72
CHD8-201ENST00000399982 KRTAP1-4P0C5Y4 121 aa4.28□□□□□ -1.73
CHD8-201ENST00000399982 KRTAP13-4Q3LI77 160 aa4.28□□□□□ -1.73
CHD8-201ENST00000399982 CFAP54Q96N23 3096 aa4.27□□□□□ -1.73
CHD8-201ENST00000399982 ITPR2Q14571 2701 aa4.27□□□□□ -1.73
CHD8-201ENST00000399982 UBR5O95071 2799 aaPredicted RBP4.25□□□□□ -1.73
CHD8-201ENST00000399982 KRTAP15-1Q3LI76 137 aa4.25□□□□□ -1.73
CHD8-201ENST00000399982 TPRXLQ17RH7 258 aa4.24□□□□□ -1.73
CHD8-201ENST00000399982 LAMA2P24043 3122 aaKnown RBP4.23□□□□□ -1.73
CHD8-201ENST00000399982 FREM2Q5SZK8 3169 aa4.23□□□□□ -1.73
CHD8-201ENST00000399982 CRCT1Q9UGL9 99 aa4.23□□□□□ -1.73
CHD8-201ENST00000399982 TRANK1O15050 2925 aa4.2□□□□□ -1.74
CHD8-201ENST00000399982 NIPBLQ6KC79 2804 aaeCLIP4.18□□□□□ -1.741e-8■■■□□ 18.9
CHD8-201ENST00000399982 KRTAP21-3Q3LHN1 58 aa4.17□□□□□ -1.74
CHD8-201ENST00000399982 UTP20O75691 2785 aaKnown RBP4.16□□□□□ -1.74
CHD8-201ENST00000399982 KRTAP12-1P59990 96 aa4.16□□□□□ -1.74
CHD8-201ENST00000399982 XIRP2A4UGR9 3374 aa4.14□□□□□ -1.75
CHD8-201ENST00000399982 CRYBG3Q68DQ2 2970 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms