RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 EYSQ5T1H1 3165 aa7.01□□□□□ -1.29
CACNA1C-216ENST00000399638 LCE6AA0A183 80 aa7□□□□□ -1.29
CACNA1C-216ENST00000399638 A0A1B0GU33 70 aa6.99□□□□□ -1.29
CACNA1C-216ENST00000399638 CHD7Q9P2D1 2997 aa6.99□□□□□ -1.29
CACNA1C-216ENST00000399638 CNBPP62633 177 aaKnown RBP6.98□□□□□ -1.29
CACNA1C-216ENST00000399638 PRR34Q9NV39 138 aa6.98□□□□□ -1.29
CACNA1C-216ENST00000399638 TEP1Q99973 2627 aaKnown RBP6.97□□□□□ -1.29
CACNA1C-216ENST00000399638 Q5XG85 94 aa6.97□□□□□ -1.29
CACNA1C-216ENST00000399638 AKAP13Q12802 2813 aa6.97□□□□□ -1.29
CACNA1C-216ENST00000399638 VCANP13611 3396 aa6.97□□□□□ -1.29
CACNA1C-216ENST00000399638 SPEGQ15772 3267 aa6.95□□□□□ -1.3
CACNA1C-216ENST00000399638 OXTP01178 125 aa6.95□□□□□ -1.3
CACNA1C-216ENST00000399638 NBEAL1Q6ZS30 2694 aa6.94□□□□□ -1.3
CACNA1C-216ENST00000399638 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.94□□□□□ -1.3
CACNA1C-216ENST00000399638 KRTAP1-3Q8IUG1 177 aa6.93□□□□□ -1.3
CACNA1C-216ENST00000399638 C20orf166-AS1Q96NR2 134 aa6.93□□□□□ -1.3
CACNA1C-216ENST00000399638 Q8N377 158 aa6.93□□□□□ -1.3
CACNA1C-216ENST00000399638 A0A096LNT2 108 aa6.93□□□□□ -1.3
CACNA1C-216ENST00000399638 R4GN34 69 aa6.92□□□□□ -1.3
CACNA1C-216ENST00000399638 FLG2Q5D862 2391 aaPredicted RBP6.92□□□□□ -1.3
CACNA1C-216ENST00000399638 GIG44P09565 113 aaPredicted RBP6.92□□□□□ -1.3
CACNA1C-216ENST00000399638 NOTCH1P46531 2555 aa6.92□□□□□ -1.3
CACNA1C-216ENST00000399638 SPANXA2-OT1Q8N9U9 137 aa6.91□□□□□ -1.3
CACNA1C-216ENST00000399638 CFAP46Q8IYW2 2715 aa6.9□□□□□ -1.3
CACNA1C-216ENST00000399638 KRTAP1-1Q07627 177 aa6.9□□□□□ -1.31
CACNA1C-216ENST00000399638 CFAP54Q96N23 3096 aa6.89□□□□□ -1.31
CACNA1C-216ENST00000399638 BAHCC1Q9P281 2608 aa6.89□□□□□ -1.31
CACNA1C-216ENST00000399638 A0A0C4DFX4 3053 aa6.89□□□□□ -1.31
CACNA1C-216ENST00000399638 TRIOO75962 3097 aa6.89□□□□□ -1.31
CACNA1C-216ENST00000399638 OCR1Q9BZK8 76 aa6.87□□□□□ -1.31
CACNA1C-216ENST00000399638 ROMO1P60602 79 aa6.86□□□□□ -1.31
CACNA1C-216ENST00000399638 COL6A3P12111 3177 aa6.85□□□□□ -1.31
CACNA1C-216ENST00000399638 M0QZ58 72 aa6.85□□□□□ -1.31
CACNA1C-216ENST00000399638 WDFY4Q6ZS81 3184 aa6.84□□□□□ -1.31
CACNA1C-216ENST00000399638 FAM229BQ4G0N7 80 aa6.83□□□□□ -1.32
CACNA1C-216ENST00000399638 COL6A5A8TX70 2615 aa6.83□□□□□ -1.32
CACNA1C-216ENST00000399638 FP248Q71RG6 208 aaPredicted RBP6.81□□□□□ -1.32
CACNA1C-216ENST00000399638 CHD6Q8TD26 2715 aa6.81□□□□□ -1.32
CACNA1C-216ENST00000399638 A0A1W2PNM2 257 aa6.81□□□□□ -1.32
CACNA1C-216ENST00000399638 Q8N9P0 234 aaPredicted RBP6.81□□□□□ -1.32
CACNA1C-216ENST00000399638 STAB2Q8WWQ8 2551 aa6.8□□□□□ -1.32
CACNA1C-216ENST00000399638 CYSTM1Q9H1C7 97 aa6.8□□□□□ -1.32
CACNA1C-216ENST00000399638 ZCCHC13Q8WW36 166 aaKnown RBP6.8□□□□□ -1.32
CACNA1C-216ENST00000399638 TEX15Q9BXT5 2789 aa6.79□□□□□ -1.32
CACNA1C-216ENST00000399638 DMAC1Q96GE9 116 aa6.79□□□□□ -1.32
CACNA1C-216ENST00000399638 UNC79Q9P2D8 2635 aa6.79□□□□□ -1.32
CACNA1C-216ENST00000399638 VPS13AQ96RL7 3174 aa6.78□□□□□ -1.32
CACNA1C-216ENST00000399638 PLAC8Q9NZF1 115 aa6.78□□□□□ -1.32
CACNA1C-216ENST00000399638 LAMA1P25391 3075 aa6.77□□□□□ -1.33
CACNA1C-216ENST00000399638 KRTAP10-1P60331 282 aa6.77□□□□□ -1.33
CACNA1C-216ENST00000399638 KRTAP16-1A8MUX0 517 aa6.76□□□□□ -1.33
CACNA1C-216ENST00000399638 SPATA8Q6RVD6 105 aa6.75□□□□□ -1.33
CACNA1C-216ENST00000399638 WDFY3Q8IZQ1 3526 aa6.74□□□□□ -1.33
CACNA1C-216ENST00000399638 ADM2Q7Z4H4 148 aa6.74□□□□□ -1.33
CACNA1C-216ENST00000399638 KRTAP10-2P60368 255 aa6.73□□□□□ -1.33
CACNA1C-216ENST00000399638 FREM2Q5SZK8 3169 aa6.72□□□□□ -1.33
CACNA1C-216ENST00000399638 Q75L30 129 aa6.7□□□□□ -1.34
CACNA1C-216ENST00000399638 DMBT1Q9UGM3 2413 aaPredicted RBP6.68□□□□□ -1.34
CACNA1C-216ENST00000399638 NSD1Q96L73 2696 aaPredicted RBP6.65□□□□□ -1.34
CACNA1C-216ENST00000399638 CHD9Q3L8U1 2897 aa6.65□□□□□ -1.34
CACNA1C-216ENST00000399638 CR1P17927 2039 aa6.64□□□□□ -1.35
CACNA1C-216ENST00000399638 C10orf95Q9H7T3 257 aa6.64□□□□□ -1.35
CACNA1C-216ENST00000399638 Q8NDZ9 215 aa6.64□□□□□ -1.35
CACNA1C-216ENST00000399638 ASPMQ8IZT6 3477 aa6.64□□□□□ -1.35
CACNA1C-216ENST00000399638 ZNF292O60281 2723 aa6.63□□□□□ -1.35
CACNA1C-216ENST00000399638 GCN1Q92616 2671 aaKnown RBP6.63□□□□□ -1.35
CACNA1C-216ENST00000399638 UBR5O95071 2799 aaPredicted RBP6.63□□□□□ -1.35
CACNA1C-216ENST00000399638 LINC01558Q9Y6Z2 57 aa6.61□□□□□ -1.35
CACNA1C-216ENST00000399638 MAP1AP78559 2803 aaPredicted RBP6.61□□□□□ -1.35
CACNA1C-216ENST00000399638 SPRR1AP35321 89 aa6.61□□□□□ -1.35
CACNA1C-216ENST00000399638 REV3LO60673 3130 aa6.6□□□□□ -1.35
CACNA1C-216ENST00000399638 RPL37P61927 97 aaKnown RBP6.59□□□□□ -1.35
CACNA1C-216ENST00000399638 ASB16-AS1Q495Z4 193 aa6.57□□□□□ -1.36
CACNA1C-216ENST00000399638 MGAQ8IWI9 3026 aa6.57□□□□□ -1.36
CACNA1C-216ENST00000399638 Q5VV11 94 aa6.57□□□□□ -1.36
CACNA1C-216ENST00000399638 CFAP47Q6ZTR5 3102 aa6.56□□□□□ -1.36
CACNA1C-216ENST00000399638 IGSF10Q6WRI0 2623 aa6.56□□□□□ -1.36
CACNA1C-216ENST00000399638 NDUFAF8A1L188 74 aa6.55□□□□□ -1.36
CACNA1C-216ENST00000399638 P0C880 135 aa6.55□□□□□ -1.36
CACNA1C-216ENST00000399638 TNRC18O15417 2968 aaPredicted RBP6.54□□□□□ -1.36
CACNA1C-216ENST00000399638 Q5W150 140 aa6.53□□□□□ -1.36
CACNA1C-216ENST00000399638 SPRR1BP22528 89 aa6.53□□□□□ -1.36
CACNA1C-216ENST00000399638 Q6ZR54 194 aa6.53□□□□□ -1.36
CACNA1C-216ENST00000399638 KRTAP1-5Q9BYS1 174 aa6.52□□□□□ -1.37
CACNA1C-216ENST00000399638 FRYLO94915 3013 aa6.51□□□□□ -1.37
CACNA1C-216ENST00000399638 DMDP11532 3685 aa6.5□□□□□ -1.37
CACNA1C-216ENST00000399638 TRANK1O15050 2925 aa6.5□□□□□ -1.37
CACNA1C-216ENST00000399638 MMP24-AS1A0A0U1RRL7 71 aa6.5□□□□□ -1.37
CACNA1C-216ENST00000399638 NBEAL2Q6ZNJ1 2754 aa6.47□□□□□ -1.37
CACNA1C-216ENST00000399638 A8MU10 97 aa6.46□□□□□ -1.38
CACNA1C-216ENST00000399638 BOD1L1Q8NFC6 3051 aa6.46□□□□□ -1.38
CACNA1C-216ENST00000399638 ZFHX4Q86UP3 3567 aa6.45□□□□□ -1.38
CACNA1C-216ENST00000399638 LINC00472Q9H8W2 130 aa6.44□□□□□ -1.38
CACNA1C-216ENST00000399638 A0A087X002 238 aa6.44□□□□□ -1.38
CACNA1C-216ENST00000399638 KRTAP29-1A8MX34 341 aaPredicted RBP6.43□□□□□ -1.38
CACNA1C-216ENST00000399638 KRTAP26-1Q6PEX3 210 aa6.43□□□□□ -1.38
CACNA1C-216ENST00000399638 KRTAP4-16G5E9R7 235 aaPredicted RBP6.42□□□□□ -1.38
CACNA1C-216ENST00000399638 KMT2BQ9UMN6 2715 aaPredicted RBP6.4□□□□□ -1.39
CACNA1C-216ENST00000399638 DSPP15924 2871 aaKnown RBP6.39□□□□□ -1.39
CACNA1C-216ENST00000399638 A8MUU9 505 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms