RNA–Protein interactions for RNA: ENST00000399601.5

CACNA1C-208, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-208ENST00000399601 ANKRD11Q6UB99 2663 aaPredicted RBP6.95□□□□□ -1.3
CACNA1C-208ENST00000399601 SPTBN4Q9H254 2564 aa6.94□□□□□ -1.3
CACNA1C-208ENST00000399601 RANBP2P49792 3224 aaKnown RBP6.94□□□□□ -1.3
CACNA1C-208ENST00000399601 CELSR3Q9NYQ7 3312 aa6.94□□□□□ -1.3
CACNA1C-208ENST00000399601 ZCCHC13Q8WW36 166 aaKnown RBP6.93□□□□□ -1.3
CACNA1C-208ENST00000399601 ACANP16112 2415 aa6.93□□□□□ -1.3
CACNA1C-208ENST00000399601 LINC01558Q9Y6Z2 57 aa6.92□□□□□ -1.3
CACNA1C-208ENST00000399601 RPL37P61927 97 aaKnown RBP6.89□□□□□ -1.31
CACNA1C-208ENST00000399601 USP34Q70CQ2 3546 aa6.89□□□□□ -1.31
CACNA1C-208ENST00000399601 Q8NDZ9 215 aa6.89□□□□□ -1.31
CACNA1C-208ENST00000399601 GIG44P09565 113 aaPredicted RBP6.88□□□□□ -1.31
CACNA1C-208ENST00000399601 C10orf95Q9H7T3 257 aa6.88□□□□□ -1.31
CACNA1C-208ENST00000399601 MYO15AQ9UKN7 3530 aa6.87□□□□□ -1.31
CACNA1C-208ENST00000399601 PCSK5Q92824 1860 aa6.86□□□□□ -1.31
CACNA1C-208ENST00000399601 SPEGQ15772 3267 aa6.86□□□□□ -1.31
CACNA1C-208ENST00000399601 SETD2Q9BYW2 2564 aaPredicted RBP6.85□□□□□ -1.31
CACNA1C-208ENST00000399601 VCANP13611 3396 aa6.85□□□□□ -1.31
CACNA1C-208ENST00000399601 SPTBN5Q9NRC6 3674 aaKnown RBP6.84□□□□□ -1.31
CACNA1C-208ENST00000399601 PKD1L2Q7Z442 2459 aa6.84□□□□□ -1.31
CACNA1C-208ENST00000399601 CFAP54Q96N23 3096 aa6.83□□□□□ -1.32
CACNA1C-208ENST00000399601 NDUFAF8A1L188 74 aa6.83□□□□□ -1.32
CACNA1C-208ENST00000399601 Q5VV11 94 aa6.83□□□□□ -1.32
CACNA1C-208ENST00000399601 Q5W150 140 aa6.82□□□□□ -1.32
CACNA1C-208ENST00000399601 PLAC8Q9NZF1 115 aa6.8□□□□□ -1.32
CACNA1C-208ENST00000399601 TRIOO75962 3097 aa6.8□□□□□ -1.32
CACNA1C-208ENST00000399601 EYSQ5T1H1 3165 aa6.79□□□□□ -1.32
CACNA1C-208ENST00000399601 FLNBO75369 2602 aaKnown RBP6.79□□□□□ -1.32
CACNA1C-208ENST00000399601 CEP295Q9C0D2 2601 aa6.78□□□□□ -1.32
CACNA1C-208ENST00000399601 OCR1Q9BZK8 76 aa6.78□□□□□ -1.32
CACNA1C-208ENST00000399601 KRTAP10-1P60331 282 aa6.77□□□□□ -1.33
CACNA1C-208ENST00000399601 USP9YO00507 2555 aaPredicted RBP6.77□□□□□ -1.33
CACNA1C-208ENST00000399601 HECTD1Q9ULT8 2610 aa6.76□□□□□ -1.33
CACNA1C-208ENST00000399601 PRRC2CQ9Y520 2896 aaKnown RBP6.75□□□□□ -1.33
CACNA1C-208ENST00000399601 LAMA1P25391 3075 aa6.75□□□□□ -1.33
CACNA1C-208ENST00000399601 CHD9Q3L8U1 2897 aa6.73□□□□□ -1.33
CACNA1C-208ENST00000399601 KRTAP10-2P60368 255 aa6.73□□□□□ -1.33
CACNA1C-208ENST00000399601 MGAM2Q2M2H8 2515 aa6.73□□□□□ -1.33
CACNA1C-208ENST00000399601 P0C880 135 aa6.72□□□□□ -1.33
CACNA1C-208ENST00000399601 Q6ZR54 194 aa6.72□□□□□ -1.33
CACNA1C-208ENST00000399601 MMP24-AS1A0A0U1RRL7 71 aa6.72□□□□□ -1.33
CACNA1C-208ENST00000399601 VPS13AQ96RL7 3174 aa6.72□□□□□ -1.33
CACNA1C-208ENST00000399601 A8MU10 97 aa6.71□□□□□ -1.33
CACNA1C-208ENST00000399601 CYSTM1Q9H1C7 97 aa6.7□□□□□ -1.34
CACNA1C-208ENST00000399601 EPG5Q9HCE0 2579 aa6.7□□□□□ -1.34
CACNA1C-208ENST00000399601 COL6A3P12111 3177 aa6.66□□□□□ -1.34
CACNA1C-208ENST00000399601 CR1P17927 2039 aa6.65□□□□□ -1.34
CACNA1C-208ENST00000399601 USP24Q9UPU5 2620 aa6.65□□□□□ -1.34
CACNA1C-208ENST00000399601 FREM2Q5SZK8 3169 aa6.63□□□□□ -1.35
CACNA1C-208ENST00000399601 KRTAP25-1Q3LHN0 102 aa6.61□□□□□ -1.35
CACNA1C-208ENST00000399601 WDFY3Q8IZQ1 3526 aa6.6□□□□□ -1.35
CACNA1C-208ENST00000399601 A8MUU9 505 aa6.59□□□□□ -1.35
CACNA1C-208ENST00000399601 WDFY4Q6ZS81 3184 aa6.59□□□□□ -1.35
CACNA1C-208ENST00000399601 SPRR1BP22528 89 aa6.58□□□□□ -1.36
CACNA1C-208ENST00000399601 KRTAP21-3Q3LHN1 58 aa6.56□□□□□ -1.36
CACNA1C-208ENST00000399601 TRANK1O15050 2925 aa6.56□□□□□ -1.36
CACNA1C-208ENST00000399601 KRTAP1-5Q9BYS1 174 aa6.53□□□□□ -1.36
CACNA1C-208ENST00000399601 REV3LO60673 3130 aa6.52□□□□□ -1.37
CACNA1C-208ENST00000399601 FRYLO94915 3013 aa6.52□□□□□ -1.37
CACNA1C-208ENST00000399601 ASB16-AS1Q495Z4 193 aa6.52□□□□□ -1.37
CACNA1C-208ENST00000399601 HELZ2Q9BYK8 2649 aaKnown RBP6.5□□□□□ -1.37
CACNA1C-208ENST00000399601 PANO1I0J062 215 aa6.5□□□□□ -1.37
CACNA1C-208ENST00000399601 TNP1P09430 55 aa6.49□□□□□ -1.37
CACNA1C-208ENST00000399601 KRTAP26-1Q6PEX3 210 aa6.49□□□□□ -1.37
CACNA1C-208ENST00000399601 A0A1B0GVY2 172 aa6.48□□□□□ -1.37
CACNA1C-208ENST00000399601 MAST4O15021 2626 aa6.48□□□□□ -1.37
CACNA1C-208ENST00000399601 KRTAP10-8P60410 259 aa6.46□□□□□ -1.38
CACNA1C-208ENST00000399601 MGAQ8IWI9 3026 aa6.45□□□□□ -1.38
CACNA1C-208ENST00000399601 ATRQ13535 2644 aa6.45□□□□□ -1.38
CACNA1C-208ENST00000399601 LINC00472Q9H8W2 130 aa6.42□□□□□ -1.38
CACNA1C-208ENST00000399601 FLG2Q5D862 2391 aaPredicted RBP6.42□□□□□ -1.38
CACNA1C-208ENST00000399601 A0A087X002 238 aa6.41□□□□□ -1.38
CACNA1C-208ENST00000399601 STAB1Q9NY15 2570 aa6.38□□□□□ -1.39
CACNA1C-208ENST00000399601 BOD1L1Q8NFC6 3051 aa6.38□□□□□ -1.39
CACNA1C-208ENST00000399601 ASPMQ8IZT6 3477 aa6.37□□□□□ -1.39
CACNA1C-208ENST00000399601 A6NN06 94 aa6.36□□□□□ -1.39
CACNA1C-208ENST00000399601 FRYQ5TBA9 3013 aa6.36□□□□□ -1.39
CACNA1C-208ENST00000399601 BAHCC1Q9P281 2608 aa6.35□□□□□ -1.39
CACNA1C-208ENST00000399601 ZFHX4Q86UP3 3567 aa6.35□□□□□ -1.39
CACNA1C-208ENST00000399601 DMDP11532 3685 aa6.35□□□□□ -1.39
CACNA1C-208ENST00000399601 ITPR3Q14573 2671 aa6.35□□□□□ -1.39
CACNA1C-208ENST00000399601 SETXQ7Z333 2677 aaKnown RBP6.34□□□□□ -1.4
CACNA1C-208ENST00000399601 FLNAP21333 2647 aaKnown RBP6.33□□□□□ -1.4
CACNA1C-208ENST00000399601 DSPP15924 2871 aaKnown RBP6.33□□□□□ -1.4
CACNA1C-208ENST00000399601 CFAP47Q6ZTR5 3102 aa6.33□□□□□ -1.4
CACNA1C-208ENST00000399601 SPRR1AP35321 89 aa6.32□□□□□ -1.4
CACNA1C-208ENST00000399601 NOTCH2NLQ7Z3S9 236 aa6.32□□□□□ -1.4
CACNA1C-208ENST00000399601 DCHS1Q96JQ0 3298 aa6.31□□□□□ -1.4
CACNA1C-208ENST00000399601 CFAP46Q8IYW2 2715 aa6.29□□□□□ -1.4
CACNA1C-208ENST00000399601 NBEAQ8NFP9 2946 aa6.28□□□□□ -1.4
CACNA1C-208ENST00000399601 AKAP13Q12802 2813 aa6.25□□□□□ -1.41
CACNA1C-208ENST00000399601 LOC400499M0QZD8 3231 aa6.25□□□□□ -1.41
CACNA1C-208ENST00000399601 KRTAP4-16G5E9R7 235 aaPredicted RBP6.23□□□□□ -1.41
CACNA1C-208ENST00000399601 LRBAP50851 2863 aa6.23□□□□□ -1.41
CACNA1C-208ENST00000399601 KALRNO60229 2985 aa6.22□□□□□ -1.41
CACNA1C-208ENST00000399601 RPS29P62273 56 aaKnown RBP6.22□□□□□ -1.41
CACNA1C-208ENST00000399601 LAMA5O15230 3695 aa6.19□□□□□ -1.42
CACNA1C-208ENST00000399601 CSMD1Q96PZ7 3565 aa6.19□□□□□ -1.42
CACNA1C-208ENST00000399601 PP632Q6XCG6 107 aa6.17□□□□□ -1.42
CACNA1C-208ENST00000399601 KRTAP10-10P60014 251 aa6.17□□□□□ -1.42
CACNA1C-208ENST00000399601 ADGRG4Q8IZF6 3080 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms