RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 KRTAP10-3P60369 221 aa7.42□□□□□ -1.22
CCBE1-201ENST00000398179 USP9XQ93008 2570 aaPredicted RBP7.42□□□□□ -1.22
CCBE1-201ENST00000398179 K7EIL1 84 aa7.4□□□□□ -1.23
CCBE1-201ENST00000398179 SPRR1BP22528 89 aa7.37□□□□□ -1.23
CCBE1-201ENST00000398179 ANKRD11Q6UB99 2663 aaPredicted RBP7.36□□□□□ -1.23
CCBE1-201ENST00000398179 SPTBN4Q9H254 2564 aa7.35□□□□□ -1.23
CCBE1-201ENST00000398179 USP9YO00507 2555 aaPredicted RBP7.35□□□□□ -1.23
CCBE1-201ENST00000398179 M0QZ58 72 aa7.34□□□□□ -1.23
CCBE1-201ENST00000398179 WWC2-AS2Q96NR7 200 aa7.34□□□□□ -1.23
CCBE1-201ENST00000398179 PKD1L2Q7Z442 2459 aa7.34□□□□□ -1.24
CCBE1-201ENST00000398179 POLQO75417 2590 aa7.33□□□□□ -1.24
CCBE1-201ENST00000398179 SPRR1AP35321 89 aa7.33□□□□□ -1.24
CCBE1-201ENST00000398179 Q6ZSA8 131 aa7.32□□□□□ -1.24
CCBE1-201ENST00000398179 MTORP42345 2549 aa7.29□□□□□ -1.24
CCBE1-201ENST00000398179 F8P00451 2351 aa7.28□□□□□ -1.24
CCBE1-201ENST00000398179 FLNBO75369 2602 aaKnown RBP7.22□□□□□ -1.25
CCBE1-201ENST00000398179 EPG5Q9HCE0 2579 aa7.2□□□□□ -1.26
CCBE1-201ENST00000398179 ACANP16112 2415 aa7.16□□□□□ -1.26
CCBE1-201ENST00000398179 H0YAA0 97 aa7.15□□□□□ -1.26
CCBE1-201ENST00000398179 KRTAP15-1Q3LI76 137 aa7.14□□□□□ -1.27
CCBE1-201ENST00000398179 TNP1P09430 55 aa7.14□□□□□ -1.27
CCBE1-201ENST00000398179 CENPFP49454 3210 aa7.14□□□□□ -1.27
CCBE1-201ENST00000398179 M0R2T5 61 aa7.13□□□□□ -1.27
CCBE1-201ENST00000398179 ANKRD17O75179 2603 aaKnown RBP7.1□□□□□ -1.27
CCBE1-201ENST00000398179 EP400Q96L91 3159 aa7.04□□□□□ -1.28
CCBE1-201ENST00000398179 KRTAP1-3Q8IUG1 177 aa7.02□□□□□ -1.29
CCBE1-201ENST00000398179 HECTD1Q9ULT8 2610 aa7□□□□□ -1.29
CCBE1-201ENST00000398179 MGAM2Q2M2H8 2515 aa7□□□□□ -1.29
CCBE1-201ENST00000398179 KRTAP1-1Q07627 177 aa6.98□□□□□ -1.29
CCBE1-201ENST00000398179 USP24Q9UPU5 2620 aa6.98□□□□□ -1.29
CCBE1-201ENST00000398179 KRTAP10-8P60410 259 aa6.96□□□□□ -1.3
CCBE1-201ENST00000398179 KRTAP1-5Q9BYS1 174 aa6.95□□□□□ -1.3
CCBE1-201ENST00000398179 ATRQ13535 2644 aa6.93□□□□□ -1.3
CCBE1-201ENST00000398179 MAST4O15021 2626 aa6.93□□□□□ -1.3
CCBE1-201ENST00000398179 TPRXLQ17RH7 258 aa6.87□□□□□ -1.31
CCBE1-201ENST00000398179 Q6ZRN7 208 aaPredicted RBP6.85□□□□□ -1.31
CCBE1-201ENST00000398179 BPTFQ12830 3046 aa6.83□□□□□ -1.32
CCBE1-201ENST00000398179 FLG2Q5D862 2391 aaPredicted RBP6.83□□□□□ -1.32
CCBE1-201ENST00000398179 KRTAP10-1P60331 282 aa6.82□□□□□ -1.32
CCBE1-201ENST00000398179 KRTAP10-2P60368 255 aa6.8□□□□□ -1.32
CCBE1-201ENST00000398179 Q5VSD8 79 aa6.74□□□□□ -1.33
CCBE1-201ENST00000398179 KRTAP7-1Q8IUC3 87 aa6.71□□□□□ -1.34
CCBE1-201ENST00000398179 PRRC2CQ9Y520 2896 aaKnown RBP6.7□□□□□ -1.34
CCBE1-201ENST00000398179 GOLGB1Q14789 3259 aaKnown RBP6.7□□□□□ -1.34
CCBE1-201ENST00000398179 HELZ2Q9BYK8 2649 aaKnown RBP6.7□□□□□ -1.34
CCBE1-201ENST00000398179 SETXQ7Z333 2677 aaKnown RBP6.69□□□□□ -1.34
CCBE1-201ENST00000398179 DNAH12Q6ZR08 3092 aa6.62□□□□□ -1.35
CCBE1-201ENST00000398179 STAB1Q9NY15 2570 aa6.62□□□□□ -1.35
CCBE1-201ENST00000398179 DMBT1Q9UGM3 2413 aaPredicted RBP6.62□□□□□ -1.35
CCBE1-201ENST00000398179 RPS29P62273 56 aaKnown RBP6.61□□□□□ -1.35
CCBE1-201ENST00000398179 FLNAP21333 2647 aaKnown RBP6.59□□□□□ -1.35
CCBE1-201ENST00000398179 KRTAP13-2Q52LG2 175 aa6.59□□□□□ -1.35
CCBE1-201ENST00000398179 ITPR3Q14573 2671 aa6.57□□□□□ -1.36
CCBE1-201ENST00000398179 CFAP46Q8IYW2 2715 aa6.57□□□□□ -1.36
CCBE1-201ENST00000398179 CENPEQ02224 2701 aa6.55□□□□□ -1.36
CCBE1-201ENST00000398179 KRTAP13-1Q8IUC0 172 aa6.55□□□□□ -1.36
CCBE1-201ENST00000398179 TEP1Q99973 2627 aaKnown RBP6.54□□□□□ -1.36
CCBE1-201ENST00000398179 A0A0C4DFX4 3053 aa6.51□□□□□ -1.37
CCBE1-201ENST00000398179 CEP350Q5VT06 3117 aa6.5□□□□□ -1.37
CCBE1-201ENST00000398179 KRTAP13-4Q3LI77 160 aa6.5□□□□□ -1.37
CCBE1-201ENST00000398179 UTRNP46939 3433 aa6.49□□□□□ -1.37
CCBE1-201ENST00000398179 NBEAL1Q6ZS30 2694 aa6.48□□□□□ -1.37
CCBE1-201ENST00000398179 KRTAP12-2P59991 146 aa6.45□□□□□ -1.38
CCBE1-201ENST00000398179 C5orf42Q9H799 3197 aa6.45□□□□□ -1.38
CCBE1-201ENST00000398179 CFAP54Q96N23 3096 aa6.45□□□□□ -1.38
CCBE1-201ENST00000398179 KRTAP21-3Q3LHN1 58 aa6.44□□□□□ -1.38
CCBE1-201ENST00000398179 CHD6Q8TD26 2715 aa6.41□□□□□ -1.38
CCBE1-201ENST00000398179 AKAP13Q12802 2813 aa6.4□□□□□ -1.38
CCBE1-201ENST00000398179 TEX15Q9BXT5 2789 aa6.39□□□□□ -1.39
CCBE1-201ENST00000398179 COL6A5A8TX70 2615 aa6.37□□□□□ -1.39
CCBE1-201ENST00000398179 GCN1Q92616 2671 aaKnown RBP6.37□□□□□ -1.39
CCBE1-201ENST00000398179 UNC79Q9P2D8 2635 aa6.37□□□□□ -1.39
CCBE1-201ENST00000398179 PCNTO95613 3336 aa6.34□□□□□ -1.39
CCBE1-201ENST00000398179 XP32Q5T750 250 aa6.34□□□□□ -1.39
CCBE1-201ENST00000398179 NOTCH1P46531 2555 aa6.31□□□□□ -1.4
CCBE1-201ENST00000398179 BAHCC1Q9P281 2608 aa6.31□□□□□ -1.4
CCBE1-201ENST00000398179 NBEAL2Q6ZNJ1 2754 aa6.29□□□□□ -1.4
CCBE1-201ENST00000398179 STAB2Q8WWQ8 2551 aa6.29□□□□□ -1.4
CCBE1-201ENST00000398179 KRTAP12-1P59990 96 aa6.27□□□□□ -1.41
CCBE1-201ENST00000398179 KRTAP13-3Q3SY46 172 aa6.26□□□□□ -1.41
CCBE1-201ENST00000398179 FREM2Q5SZK8 3169 aa6.26□□□□□ -1.41
CCBE1-201ENST00000398179 A0A1B0GVY2 172 aa6.25□□□□□ -1.41
CCBE1-201ENST00000398179 CHD7Q9P2D1 2997 aa6.2□□□□□ -1.42
CCBE1-201ENST00000398179 RANBP2P49792 3224 aaKnown RBP6.19□□□□□ -1.42
CCBE1-201ENST00000398179 ZNF292O60281 2723 aa6.17□□□□□ -1.42
CCBE1-201ENST00000398179 MGAQ8IWI9 3026 aa6.17□□□□□ -1.42
CCBE1-201ENST00000398179 LAMA2P24043 3122 aaKnown RBP6.16□□□□□ -1.42
CCBE1-201ENST00000398179 KRTAP1-4P0C5Y4 121 aa6.14□□□□□ -1.43
CCBE1-201ENST00000398179 TRIOO75962 3097 aa6.13□□□□□ -1.43
CCBE1-201ENST00000398179 MAP1AP78559 2803 aaPredicted RBP6.13□□□□□ -1.43
CCBE1-201ENST00000398179 UBR5O95071 2799 aaPredicted RBP6.12□□□□□ -1.43
CCBE1-201ENST00000398179 DSPP15924 2871 aaKnown RBP6.1□□□□□ -1.43
CCBE1-201ENST00000398179 KRTAP3-3Q9BYR6 98 aa6.1□□□□□ -1.43
CCBE1-201ENST00000398179 KRTAP3-2Q9BYR7 98 aa6.1□□□□□ -1.43
CCBE1-201ENST00000398179 IGSF10Q6WRI0 2623 aa6.07□□□□□ -1.44
CCBE1-201ENST00000398179 NSD1Q96L73 2696 aaPredicted RBP6.07□□□□□ -1.44
CCBE1-201ENST00000398179 FRYQ5TBA9 3013 aa6.07□□□□□ -1.44
CCBE1-201ENST00000398179 KRTAP19-4Q3LI73 84 aa6.06□□□□□ -1.44
CCBE1-201ENST00000398179 CHD9Q3L8U1 2897 aa6.06□□□□□ -1.44
CCBE1-201ENST00000398179 WDFY4Q6ZS81 3184 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms