RNA–Protein interactions for RNA: ENST00000398146.3

RGPD2-201, Transcript of RANBP2-like and GRIP domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD2, Length 6,931 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD2-201ENST00000398146 Q8NDZ9 215 aa6.64□□□□□ -1.35
RGPD2-201ENST00000398146 CENPFP49454 3210 aa6.63□□□□□ -1.35
RGPD2-201ENST00000398146 SPRR1BP22528 89 aa6.63□□□□□ -1.35
RGPD2-201ENST00000398146 A8MUU9 505 aa6.63□□□□□ -1.35
RGPD2-201ENST00000398146 Q75L30 129 aa6.62□□□□□ -1.35
RGPD2-201ENST00000398146 Q6ZR54 194 aa6.61□□□□□ -1.35
RGPD2-201ENST00000398146 PCNTO95613 3336 aa6.61□□□□□ -1.35
RGPD2-201ENST00000398146 BPTFQ12830 3046 aa6.6□□□□□ -1.35
RGPD2-201ENST00000398146 EPG5Q9HCE0 2579 aa6.59□□□□□ -1.35
RGPD2-201ENST00000398146 A0A087X002 238 aa6.59□□□□□ -1.35
RGPD2-201ENST00000398146 A0A1B0GVY2 172 aa6.58□□□□□ -1.36
RGPD2-201ENST00000398146 H3BS24 57 aa6.58□□□□□ -1.36
RGPD2-201ENST00000398146 LINC01558Q9Y6Z2 57 aa6.57□□□□□ -1.36
RGPD2-201ENST00000398146 PANO1I0J062 215 aa6.57□□□□□ -1.36
RGPD2-201ENST00000398146 LINC00472Q9H8W2 130 aa6.55□□□□□ -1.36
RGPD2-201ENST00000398146 KRTAP26-1Q6PEX3 210 aa6.55□□□□□ -1.36
RGPD2-201ENST00000398146 ATRQ13535 2644 aa6.53□□□□□ -1.36
RGPD2-201ENST00000398146 SPRR1AP35321 89 aa6.5□□□□□ -1.37
RGPD2-201ENST00000398146 KRTAP10-8P60410 259 aa6.5□□□□□ -1.37
RGPD2-201ENST00000398146 EP400Q96L91 3159 aa6.49□□□□□ -1.37
RGPD2-201ENST00000398146 USP34Q70CQ2 3546 aa6.47□□□□□ -1.37
RGPD2-201ENST00000398146 MAST4O15021 2626 aa6.46□□□□□ -1.37
RGPD2-201ENST00000398146 C10orf95Q9H7T3 257 aa6.46□□□□□ -1.37
RGPD2-201ENST00000398146 TNP1P09430 55 aa6.45□□□□□ -1.38
RGPD2-201ENST00000398146 A8MU10 97 aa6.43□□□□□ -1.38
RGPD2-201ENST00000398146 Q5VV11 94 aa6.42□□□□□ -1.38
RGPD2-201ENST00000398146 CFAP46Q8IYW2 2715 aa6.39□□□□□ -1.39
RGPD2-201ENST00000398146 STAB1Q9NY15 2570 aa6.38□□□□□ -1.39
RGPD2-201ENST00000398146 KRTAP10-10P60014 251 aa6.37□□□□□ -1.39
RGPD2-201ENST00000398146 NOTCH2NLQ7Z3S9 236 aa6.36□□□□□ -1.39
RGPD2-201ENST00000398146 ITPR3Q14573 2671 aa6.36□□□□□ -1.39
RGPD2-201ENST00000398146 HELZ2Q9BYK8 2649 aaKnown RBP6.36□□□□□ -1.39
RGPD2-201ENST00000398146 P0C880 135 aa6.36□□□□□ -1.39
RGPD2-201ENST00000398146 FLNAP21333 2647 aaKnown RBP6.35□□□□□ -1.39
RGPD2-201ENST00000398146 BRCA2P51587 3418 aa6.27□□□□□ -1.41
RGPD2-201ENST00000398146 LAMA3Q16787 3333 aa6.26□□□□□ -1.41
RGPD2-201ENST00000398146 KRTAP11-1Q8IUC1 163 aa6.26□□□□□ -1.41
RGPD2-201ENST00000398146 KRTAP16-1A8MUX0 517 aa6.26□□□□□ -1.41
RGPD2-201ENST00000398146 DMBT1Q9UGM3 2413 aaPredicted RBP6.25□□□□□ -1.41
RGPD2-201ENST00000398146 SETXQ7Z333 2677 aaKnown RBP6.25□□□□□ -1.41
RGPD2-201ENST00000398146 RPS29P62273 56 aaKnown RBP6.25□□□□□ -1.41
RGPD2-201ENST00000398146 KRTAP13-2Q52LG2 175 aa6.25□□□□□ -1.41
RGPD2-201ENST00000398146 CYSTM1Q9H1C7 97 aa6.23□□□□□ -1.41
RGPD2-201ENST00000398146 PRO2289Q9P1D8 64 aa6.22□□□□□ -1.41
RGPD2-201ENST00000398146 CEP350Q5VT06 3117 aa6.18□□□□□ -1.42
RGPD2-201ENST00000398146 Q6ZRN7 208 aaPredicted RBP6.18□□□□□ -1.42
RGPD2-201ENST00000398146 C5orf42Q9H799 3197 aa6.18□□□□□ -1.42
RGPD2-201ENST00000398146 Q5XG85 94 aa6.17□□□□□ -1.42
RGPD2-201ENST00000398146 NBEAL1Q6ZS30 2694 aa6.17□□□□□ -1.42
RGPD2-201ENST00000398146 NDUFAF8A1L188 74 aa6.16□□□□□ -1.42
RGPD2-201ENST00000398146 TEX15Q9BXT5 2789 aa6.15□□□□□ -1.42
RGPD2-201ENST00000398146 KRTAP21-3Q3LHN1 58 aa6.15□□□□□ -1.42
RGPD2-201ENST00000398146 STAB2Q8WWQ8 2551 aa6.15□□□□□ -1.43
RGPD2-201ENST00000398146 KRTAP25-1Q3LHN0 102 aa6.15□□□□□ -1.43
RGPD2-201ENST00000398146 PRRC2CQ9Y520 2896 aaKnown RBP6.14□□□□□ -1.43
RGPD2-201ENST00000398146 BAHCC1Q9P281 2608 aa6.14□□□□□ -1.43
RGPD2-201ENST00000398146 KRTAP4-16G5E9R7 235 aaPredicted RBP6.13□□□□□ -1.43
RGPD2-201ENST00000398146 TEP1Q99973 2627 aaKnown RBP6.12□□□□□ -1.43
RGPD2-201ENST00000398146 ASB16-AS1Q495Z4 193 aa6.1□□□□□ -1.43
RGPD2-201ENST00000398146 LAMA2P24043 3122 aaKnown RBP6.09□□□□□ -1.43
RGPD2-201ENST00000398146 KRTAP29-1A8MX34 341 aaPredicted RBP6.09□□□□□ -1.43
RGPD2-201ENST00000398146 XP32Q5T750 250 aa6.09□□□□□ -1.43
RGPD2-201ENST00000398146 VCANP13611 3396 aa6.07□□□□□ -1.44
RGPD2-201ENST00000398146 AKAP13Q12802 2813 aa6.01□□□□□ -1.45
RGPD2-201ENST00000398146 XIRP2A4UGR9 3374 aa6.01□□□□□ -1.45
RGPD2-201ENST00000398146 UNC79Q9P2D8 2635 aa5.99□□□□□ -1.45
RGPD2-201ENST00000398146 DNAH12Q6ZR08 3092 aa5.98□□□□□ -1.45
RGPD2-201ENST00000398146 MYO15AQ9UKN7 3530 aa5.98□□□□□ -1.45
RGPD2-201ENST00000398146 CHD6Q8TD26 2715 aa5.98□□□□□ -1.45
RGPD2-201ENST00000398146 KRTAP7-1Q8IUC3 87 aa5.97□□□□□ -1.45
RGPD2-201ENST00000398146 CDH23Q9H251 3354 aa5.95□□□□□ -1.46
RGPD2-201ENST00000398146 TPRXLQ17RH7 258 aa5.94□□□□□ -1.46
RGPD2-201ENST00000398146 PP632Q6XCG6 107 aa5.93□□□□□ -1.46
RGPD2-201ENST00000398146 COL6A5A8TX70 2615 aa5.93□□□□□ -1.46
RGPD2-201ENST00000398146 CENPEQ02224 2701 aa5.92□□□□□ -1.46
RGPD2-201ENST00000398146 MKI67P46013 3256 aaKnown RBP5.91□□□□□ -1.46
RGPD2-201ENST00000398146 KRTAP13-1Q8IUC0 172 aa5.91□□□□□ -1.46
RGPD2-201ENST00000398146 WDFY3Q8IZQ1 3526 aa5.89□□□□□ -1.47
RGPD2-201ENST00000398146 NOTCH1P46531 2555 aa5.89□□□□□ -1.47
RGPD2-201ENST00000398146 CRYBG3Q68DQ2 2970 aa5.88□□□□□ -1.47
RGPD2-201ENST00000398146 DNAH14Q0VDD8 3507 aa5.88□□□□□ -1.47
RGPD2-201ENST00000398146 EYSQ5T1H1 3165 aa5.88□□□□□ -1.47
RGPD2-201ENST00000398146 A0A0C4DFX4 3053 aa5.86□□□□□ -1.47
RGPD2-201ENST00000398146 SPEGQ15772 3267 aa5.84□□□□□ -1.47
RGPD2-201ENST00000398146 FRYQ5TBA9 3013 aa5.84□□□□□ -1.48
RGPD2-201ENST00000398146 SZT2Q5T011 3432 aa5.84□□□□□ -1.48
RGPD2-201ENST00000398146 KMT2BQ9UMN6 2715 aaPredicted RBP5.83□□□□□ -1.48
RGPD2-201ENST00000398146 UNC80Q8N2C7 3258 aa5.81□□□□□ -1.48
RGPD2-201ENST00000398146 A6NN06 94 aa5.8□□□□□ -1.48
RGPD2-201ENST00000398146 KRTAP1-4P0C5Y4 121 aa5.79□□□□□ -1.48
RGPD2-201ENST00000398146 CRCT1Q9UGL9 99 aa5.79□□□□□ -1.48
RGPD2-201ENST00000398146 IGSF10Q6WRI0 2623 aa5.77□□□□□ -1.49
RGPD2-201ENST00000398146 SPTBN5Q9NRC6 3674 aaKnown RBP5.77□□□□□ -1.49
RGPD2-201ENST00000398146 RANBP2P49792 3224 aaKnown RBP5.77□□□□□ -1.49
RGPD2-201ENST00000398146 HTTP42858 3142 aa5.77□□□□□ -1.49
RGPD2-201ENST00000398146 KRTAP13-3Q3SY46 172 aa5.76□□□□□ -1.49
RGPD2-201ENST00000398146 GCN1Q92616 2671 aaKnown RBP5.74□□□□□ -1.49
RGPD2-201ENST00000398146 ITPR2Q14571 2701 aa5.73□□□□□ -1.49
RGPD2-201ENST00000398146 REV3LO60673 3130 aa5.73□□□□□ -1.49
RGPD2-201ENST00000398146 CFAP54Q96N23 3096 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms