RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 LCE6AA0A183 80 aa9.83□□□□□ -0.84
LSS-202ENST00000397728 MYO15AQ9UKN7 3530 aa9.83□□□□□ -0.84
LSS-202ENST00000397728 DCHS2Q6V1P9 2916 aa9.83□□□□□ -0.84
LSS-202ENST00000397728 TRBV7-4A0A0J9YYF1 115 aa9.83□□□□□ -0.84
LSS-202ENST00000397728 LOC110117498A0A087WWA1 95 aa9.83□□□□□ -0.84
LSS-202ENST00000397728 A0A0G2JQZ4 141 aa9.82□□□□□ -0.84
LSS-202ENST00000397728 SPAG11AQ6PDA7 123 aa9.82□□□□□ -0.84
LSS-202ENST00000397728 KRTAP1-5Q9BYS1 174 aa9.82□□□□□ -0.84
LSS-202ENST00000397728 SMIM29Q86T20 159 aa9.82□□□□□ -0.84
LSS-202ENST00000397728 ERC2-IT1O76042 136 aa9.81□□□□□ -0.84
LSS-202ENST00000397728 Q8N377 158 aa9.81□□□□□ -0.84
LSS-202ENST00000397728 IGFL1Q6UW32 110 aa9.81□□□□□ -0.84
LSS-202ENST00000397728 ATP11AUNQ6ZP68 121 aa9.8□□□□□ -0.84
LSS-202ENST00000397728 C4orf26Q17RF5 130 aa9.79□□□□□ -0.84
LSS-202ENST00000397728 SPRR4Q96PI1 79 aa9.79□□□□□ -0.84
LSS-202ENST00000397728 NF1P21359 2839 aa9.79□□□□□ -0.84
LSS-202ENST00000397728 C1orf64Q8NEQ6 169 aa9.78□□□□□ -0.84
LSS-202ENST00000397728 FAM104AQ969W3 186 aa9.77□□□□□ -0.85
LSS-202ENST00000397728 HRNRQ86YZ3 2850 aaPredicted RBP9.75□□□□□ -0.85
LSS-202ENST00000397728 TP53AIP1Q9HCN2 124 aa9.74□□□□□ -0.85
LSS-202ENST00000397728 C9orf92A6NGG3 77 aa9.74□□□□□ -0.85
LSS-202ENST00000397728 DMBT1Q9UGM3 2413 aaPredicted RBP9.73□□□□□ -0.85
LSS-202ENST00000397728 IGLV5-37A0A075B6J1 123 aa9.73□□□□□ -0.85
LSS-202ENST00000397728 KRTAP21-3Q3LHN1 58 aa9.73□□□□□ -0.85
LSS-202ENST00000397728 H3BPC8 53 aa9.72□□□□□ -0.85
LSS-202ENST00000397728 MUC3AQ02505 3323 aa9.71□□□□□ -0.85
LSS-202ENST00000397728 A8MWP4 228 aa9.7□□□□□ -0.86
LSS-202ENST00000397728 OBSCN-AS1Q96MR7 158 aa9.7□□□□□ -0.86
LSS-202ENST00000397728 C8orf87E5RJ46 101 aa9.69□□□□□ -0.86
LSS-202ENST00000397728 PSPHP1O15172 72 aa9.69□□□□□ -0.86
LSS-202ENST00000397728 DSCR10P59022 87 aa9.69□□□□□ -0.86
LSS-202ENST00000397728 C7orf65Q6ZTY9 151 aa9.68□□□□□ -0.86
LSS-202ENST00000397728 DCHS1Q96JQ0 3298 aa9.68□□□□□ -0.86
LSS-202ENST00000397728 COX6B2Q6YFQ2 88 aa9.68□□□□□ -0.86
LSS-202ENST00000397728 PRR26Q8N8Z3 221 aa9.68□□□□□ -0.86
LSS-202ENST00000397728 K7EQZ3 153 aa9.67□□□□□ -0.86
LSS-202ENST00000397728 FBN2P35556 2912 aa9.66□□□□□ -0.86
LSS-202ENST00000397728 PLAC8Q9NZF1 115 aa9.66□□□□□ -0.86
LSS-202ENST00000397728 LINC01600Q96MT4 127 aa9.66□□□□□ -0.86
LSS-202ENST00000397728 KRTAP10-2P60368 255 aa9.65□□□□□ -0.87
LSS-202ENST00000397728 TRAV22A0A0B4J277 110 aa9.64□□□□□ -0.87
LSS-202ENST00000397728 MRPL34Q9BQ48 92 aaKnown RBP9.64□□□□□ -0.87
LSS-202ENST00000397728 KLKP1Q107X0 134 aa9.61□□□□□ -0.87
LSS-202ENST00000397728 KRTAP10-1P60331 282 aa9.61□□□□□ -0.87
LSS-202ENST00000397728 RELNP78509 3460 aa9.6□□□□□ -0.87
LSS-202ENST00000397728 CYP4F30PQ9H0H9 118 aa9.6□□□□□ -0.87
LSS-202ENST00000397728 CD164Q04900 197 aa9.59□□□□□ -0.87
LSS-202ENST00000397728 C8orf17Q9NRJ1 99 aa9.59□□□□□ -0.87
LSS-202ENST00000397728 A0A1B0GVX0 72 aa9.59□□□□□ -0.87
LSS-202ENST00000397728 PRR15Q8IV56 129 aa9.58□□□□□ -0.88
LSS-202ENST00000397728 MXRA5Q9NR99 2828 aa9.58□□□□□ -0.88
LSS-202ENST00000397728 A0A1W2PNM2 257 aa9.58□□□□□ -0.88
LSS-202ENST00000397728 KRTAP26-1Q6PEX3 210 aa9.58□□□□□ -0.88
LSS-202ENST00000397728 Q6ZR54 194 aa9.57□□□□□ -0.88
LSS-202ENST00000397728 Q5VSD8 79 aa9.56□□□□□ -0.88
LSS-202ENST00000397728 Q8NDZ9 215 aa9.54□□□□□ -0.88
LSS-202ENST00000397728 IGLV7-46A0A075B6I9 117 aa9.51□□□□□ -0.89
LSS-202ENST00000397728 LAMA5O15230 3695 aa9.51□□□□□ -0.89
LSS-202ENST00000397728 IGLV5-48A0A075B6I7 105 aa9.5□□□□□ -0.89
LSS-202ENST00000397728 LOC101927531A0A1B0GV80 90 aa9.5□□□□□ -0.89
LSS-202ENST00000397728 ACYP2P14621 99 aa9.5□□□□□ -0.89
LSS-202ENST00000397728 FAM229BQ4G0N7 80 aa9.5□□□□□ -0.89
LSS-202ENST00000397728 SPRR1AP35321 89 aa9.45□□□□□ -0.9
LSS-202ENST00000397728 H7BZZ5 65 aa9.45□□□□□ -0.9
LSS-202ENST00000397728 PANO1I0J062 215 aa9.44□□□□□ -0.9
LSS-202ENST00000397728 ASPMQ8IZT6 3477 aa9.42□□□□□ -0.9
LSS-202ENST00000397728 KTN1-AS1Q86SY8 53 aa9.4□□□□□ -0.91
LSS-202ENST00000397728 FLG2Q5D862 2391 aaPredicted RBP9.4□□□□□ -0.91
LSS-202ENST00000397728 Q6ZSA8 131 aa9.38□□□□□ -0.91
LSS-202ENST00000397728 RBM12B-AS1Q9P1G2 102 aa9.38□□□□□ -0.91
LSS-202ENST00000397728 A0A1B0GU69 56 aa9.38□□□□□ -0.91
LSS-202ENST00000397728 DMDP11532 3685 aa9.37□□□□□ -0.91
LSS-202ENST00000397728 TENM3Q9P273 2699 aa9.35□□□□□ -0.91
LSS-202ENST00000397728 TENM1Q9UKZ4 2725 aa9.34□□□□□ -0.91
LSS-202ENST00000397728 Q6ZRN7 208 aaPredicted RBP9.34□□□□□ -0.91
LSS-202ENST00000397728 WDFY3Q8IZQ1 3526 aa9.34□□□□□ -0.91
LSS-202ENST00000397728 PKD1L1Q8TDX9 2849 aa9.33□□□□□ -0.92
LSS-202ENST00000397728 LCA10Q71F78 164 aa9.33□□□□□ -0.92
LSS-202ENST00000397728 A8MUN3 132 aa9.31□□□□□ -0.92
LSS-202ENST00000397728 SPRR1BP22528 89 aa9.29□□□□□ -0.92
LSS-202ENST00000397728 PDZD2O15018 2839 aa9.29□□□□□ -0.92
LSS-202ENST00000397728 IGLV8-61A0A075B6I0 122 aa9.29□□□□□ -0.92
LSS-202ENST00000397728 SPANXA2-OT1Q8N9U9 137 aa9.28□□□□□ -0.92
LSS-202ENST00000397728 Q1T7F1 81 aa9.27□□□□□ -0.92
LSS-202ENST00000397728 COA5Q86WW8 74 aa9.26□□□□□ -0.93
LSS-202ENST00000397728 TENM2Q9NT68 2774 aa9.25□□□□□ -0.93
LSS-202ENST00000397728 CELSR1Q9NYQ6 3014 aa9.25□□□□□ -0.93
LSS-202ENST00000397728 Q8N1X5 172 aa9.24□□□□□ -0.93
LSS-202ENST00000397728 OTOGQ6ZRI0 2925 aa9.24□□□□□ -0.93
LSS-202ENST00000397728 M0R2T5 61 aa9.2□□□□□ -0.94
LSS-202ENST00000397728 Q5XG85 94 aa9.2□□□□□ -0.94
LSS-202ENST00000397728 CDC42SE1Q9NRR8 79 aa9.2□□□□□ -0.94
LSS-202ENST00000397728 FBN1P35555 2871 aaKnown RBP9.18□□□□□ -0.94
LSS-202ENST00000397728 ZFHX3Q15911 3703 aa9.18□□□□□ -0.94
LSS-202ENST00000397728 UQCR11O14957 56 aa9.17□□□□□ -0.94
LSS-202ENST00000397728 A0A087X002 238 aa9.16□□□□□ -0.94
LSS-202ENST00000397728 KRTAP4-16G5E9R7 235 aaPredicted RBP9.15□□□□□ -0.95
LSS-202ENST00000397728 NBPF19A0A087WUL8 3843 aa9.14□□□□□ -0.95
LSS-202ENST00000397728 SMG1Q96Q15 3661 aaKnown RBP9.13□□□□□ -0.95
LSS-202ENST00000397728 KRTAP11-1Q8IUC1 163 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms