RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 FAM236DA0A1B0GTK5 79 aa2.19□□□□□ -2.06
VPS13C-203ENST00000395896 FAM236CP0DP71 79 aa2.19□□□□□ -2.06
VPS13C-203ENST00000395896 Q8N377 158 aa2.18□□□□□ -2.06
VPS13C-203ENST00000395896 Q8N9L7 120 aa2.18□□□□□ -2.06
VPS13C-203ENST00000395896 SPINK1P00995 79 aa2.18□□□□□ -2.06
VPS13C-203ENST00000395896 KLKP1Q107X0 134 aa2.18□□□□□ -2.06
VPS13C-203ENST00000395896 SERTAD4-AS1Q5TG53 156 aa2.18□□□□□ -2.06
VPS13C-203ENST00000395896 TMEM254Q8TBM7 123 aa2.18□□□□□ -2.06
VPS13C-203ENST00000395896 TRAV22A0A0B4J277 110 aa2.18□□□□□ -2.06
VPS13C-203ENST00000395896 A8MWP4 228 aa2.18□□□□□ -2.06
VPS13C-203ENST00000395896 FAM229BQ4G0N7 80 aa2.18□□□□□ -2.06
VPS13C-203ENST00000395896 PLA2G1BP04054 148 aaKnown RBP2.17□□□□□ -2.06
VPS13C-203ENST00000395896 CIRBP-AS1Q8TBR5 109 aa2.17□□□□□ -2.06
VPS13C-203ENST00000395896 C8orf87E5RJ46 101 aa2.17□□□□□ -2.06
VPS13C-203ENST00000395896 CASC10Q5T4H9 136 aa2.17□□□□□ -2.06
VPS13C-203ENST00000395896 SPRR1BP22528 89 aa2.17□□□□□ -2.06
VPS13C-203ENST00000395896 ANK2Q01484 3957 aa2.17□□□□□ -2.06
VPS13C-203ENST00000395896 CHKB-CPT1BH3BT56 60 aa2.17□□□□□ -2.06
VPS13C-203ENST00000395896 LRCOL1A6NCL2 159 aa2.17□□□□□ -2.06
VPS13C-203ENST00000395896 SPACA4Q8TDM5 124 aa2.17□□□□□ -2.06
VPS13C-203ENST00000395896 PLAC8Q9NZF1 115 aa2.16□□□□□ -2.06
VPS13C-203ENST00000395896 KRTAP26-1Q6PEX3 210 aa2.16□□□□□ -2.06
VPS13C-203ENST00000395896 SPTSSBQ8NFR3 76 aa2.16□□□□□ -2.06
VPS13C-203ENST00000395896 PHF5AQ7RTV0 110 aaKnown RBP2.16□□□□□ -2.06
VPS13C-203ENST00000395896 SEC61GP60059 68 aa2.16□□□□□ -2.06
VPS13C-203ENST00000395896 SPINK6Q6UWN8 80 aa2.16□□□□□ -2.06
VPS13C-203ENST00000395896 PRR15LQ9BU68 103 aa2.16□□□□□ -2.06
VPS13C-203ENST00000395896 CHTF8P0CG12 524 aa2.16□□□□□ -2.06
VPS13C-203ENST00000395896 IGLV8-61A0A075B6I0 122 aa2.16□□□□□ -2.06
VPS13C-203ENST00000395896 PSORS1C2Q9UIG4 136 aa2.16□□□□□ -2.06
VPS13C-203ENST00000395896 IGLV7-43P04211 117 aa2.15□□□□□ -2.06
VPS13C-203ENST00000395896 PRR15Q8IV56 129 aa2.15□□□□□ -2.06
VPS13C-203ENST00000395896 LOC101927531A0A1B0GV80 90 aa2.15□□□□□ -2.06
VPS13C-203ENST00000395896 SMIM26A0A096LP01 95 aa2.15□□□□□ -2.07
VPS13C-203ENST00000395896 SERP1Q9Y6X1 66 aa2.15□□□□□ -2.07
VPS13C-203ENST00000395896 FAM168BA1KXE4 195 aa2.15□□□□□ -2.07
VPS13C-203ENST00000395896 WFDC13Q8IUB5 93 aa2.15□□□□□ -2.07
VPS13C-203ENST00000395896 SCXQ7RTU7 201 aa2.15□□□□□ -2.07
VPS13C-203ENST00000395896 ANK3Q12955 4377 aaKnown RBP2.15□□□□□ -2.07
VPS13C-203ENST00000395896 TYMSOSQ8TAI1 123 aa2.15□□□□□ -2.07
VPS13C-203ENST00000395896 LINC00208Q96KT6 92 aa2.15□□□□□ -2.07
VPS13C-203ENST00000395896 IGFL1Q6UW32 110 aa2.14□□□□□ -2.07
VPS13C-203ENST00000395896 Q6ZR54 194 aa2.14□□□□□ -2.07
VPS13C-203ENST00000395896 A0A087WVE0 104 aa2.14□□□□□ -2.07
VPS13C-203ENST00000395896 CCDC179H3BU77 68 aa2.14□□□□□ -2.07
VPS13C-203ENST00000395896 ST20-AS1Q8NBB2 130 aa2.14□□□□□ -2.07
VPS13C-203ENST00000395896 LINC00313P59037 77 aa2.14□□□□□ -2.07
VPS13C-203ENST00000395896 IGHV6-1A0A0B4J1U7 121 aa2.13□□□□□ -2.07
VPS13C-203ENST00000395896 KRTAP4-16G5E9R7 235 aaPredicted RBP2.13□□□□□ -2.07
VPS13C-203ENST00000395896 H0Y9P7 68 aa2.13□□□□□ -2.07
VPS13C-203ENST00000395896 C1orf195Q5TG92 126 aa2.13□□□□□ -2.07
VPS13C-203ENST00000395896 CSMD3Q7Z407 3707 aa2.12□□□□□ -2.07
VPS13C-203ENST00000395896 SPANXA2-OT1Q8N9U9 137 aa2.12□□□□□ -2.07
VPS13C-203ENST00000395896 A0A1W2PNN7 141 aa2.12□□□□□ -2.07
VPS13C-203ENST00000395896 MRPL34Q9BQ48 92 aaKnown RBP2.12□□□□□ -2.07
VPS13C-203ENST00000395896 A0A1B0GVX0 72 aa2.12□□□□□ -2.07
VPS13C-203ENST00000395896 K7EQZ3 153 aa2.12□□□□□ -2.07
VPS13C-203ENST00000395896 KRTAP1-5Q9BYS1 174 aa2.12□□□□□ -2.07
VPS13C-203ENST00000395896 C1orf64Q8NEQ6 169 aa2.11□□□□□ -2.07
VPS13C-203ENST00000395896 LINC00304Q8N9R0 145 aa2.11□□□□□ -2.07
VPS13C-203ENST00000395896 K7ERS5 55 aa2.11□□□□□ -2.07
VPS13C-203ENST00000395896 TNP2Q05952 138 aa2.11□□□□□ -2.07
VPS13C-203ENST00000395896 ACYP2P14621 99 aa2.11□□□□□ -2.07
VPS13C-203ENST00000395896 A0A1W2PNM2 257 aa2.11□□□□□ -2.07
VPS13C-203ENST00000395896 SNURFQ9Y675 71 aa2.11□□□□□ -2.07
VPS13C-203ENST00000395896 SMIM29Q86T20 159 aa2.11□□□□□ -2.07
VPS13C-203ENST00000395896 Q6ZRN7 208 aaPredicted RBP2.1□□□□□ -2.07
VPS13C-203ENST00000395896 SVIPQ8NHG7 77 aa2.1□□□□□ -2.07
VPS13C-203ENST00000395896 HRCT1Q6UXD1 115 aa2.1□□□□□ -2.07
VPS13C-203ENST00000395896 RPS29P62273 56 aaKnown RBP2.1□□□□□ -2.07
VPS13C-203ENST00000395896 LINC00483Q53H64 154 aa2.1□□□□□ -2.07
VPS13C-203ENST00000395896 Q5XG85 94 aa2.1□□□□□ -2.07
VPS13C-203ENST00000395896 LCE6AA0A183 80 aa2.1□□□□□ -2.07
VPS13C-203ENST00000395896 ASB16-AS1Q495Z4 193 aa2.09□□□□□ -2.07
VPS13C-203ENST00000395896 A8MUN3 132 aa2.09□□□□□ -2.07
VPS13C-203ENST00000395896 OCR1Q9BZK8 76 aa2.09□□□□□ -2.07
VPS13C-203ENST00000395896 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.09□□□□□ -2.08
VPS13C-203ENST00000395896 LINC00472Q9H8W2 130 aa2.09□□□□□ -2.08
VPS13C-203ENST00000395896 DEFB116Q30KQ4 102 aa2.09□□□□□ -2.08
VPS13C-203ENST00000395896 C8orf17Q9NRJ1 99 aa2.08□□□□□ -2.08
VPS13C-203ENST00000395896 Q8NDZ9 215 aa2.08□□□□□ -2.08
VPS13C-203ENST00000395896 ATP11AUNQ6ZP68 121 aa2.08□□□□□ -2.08
VPS13C-203ENST00000395896 DSCR10P59022 87 aa2.08□□□□□ -2.08
VPS13C-203ENST00000395896 H7BZZ5 65 aa2.08□□□□□ -2.08
VPS13C-203ENST00000395896 C7orf65Q6ZTY9 151 aa2.07□□□□□ -2.08
VPS13C-203ENST00000395896 LYSTQ99698 3801 aa2.07□□□□□ -2.08
VPS13C-203ENST00000395896 A6NED7 52 aa2.07□□□□□ -2.08
VPS13C-203ENST00000395896 CYP4F30PQ9H0H9 118 aa2.07□□□□□ -2.08
VPS13C-203ENST00000395896 Q6ZSA8 131 aa2.06□□□□□ -2.08
VPS13C-203ENST00000395896 BRK1Q8WUW1 75 aa2.05□□□□□ -2.08
VPS13C-203ENST00000395896 IGKV2D-30A0A075B6S6 120 aa2.05□□□□□ -2.08
VPS13C-203ENST00000395896 IGKV2-30P06310 120 aa2.05□□□□□ -2.08
VPS13C-203ENST00000395896 FP248Q71RG6 208 aaPredicted RBP2.05□□□□□ -2.08
VPS13C-203ENST00000395896 KRTAP13-1Q8IUC0 172 aa2.05□□□□□ -2.08
VPS13C-203ENST00000395896 A0A0U1RQV1 116 aa2.05□□□□□ -2.08
VPS13C-203ENST00000395896 CMYA5Q8N3K9 4069 aa2.04□□□□□ -2.08
VPS13C-203ENST00000395896 FRAS1Q86XX4 4008 aa2.04□□□□□ -2.08
VPS13C-203ENST00000395896 MPLKIPQ8TAP9 179 aa2.04□□□□□ -2.08
VPS13C-203ENST00000395896 Q96NJ1 140 aa2.04□□□□□ -2.08
VPS13C-203ENST00000395896 PRO0628Q9UI54 55 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms