RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.68□□□□□ -0.86
CXCL1-201ENST00000395761 TRBV20-1A0A075B6N2 111 aa9.67□□□□□ -0.86
CXCL1-201ENST00000395761 TRACP01848 142 aa9.66□□□□□ -0.86
CXCL1-201ENST00000395761 FABP2P12104 132 aa9.66□□□□□ -0.86
CXCL1-201ENST00000395761 TCL1BO95988 128 aa9.65□□□□□ -0.86
CXCL1-201ENST00000395761 Q6ZQY7 126 aa9.65□□□□□ -0.86
CXCL1-201ENST00000395761 IGLV5-48A0A075B6I7 105 aa9.64□□□□□ -0.87
CXCL1-201ENST00000395761 SPRR1BP22528 89 aa9.64□□□□□ -0.87
CXCL1-201ENST00000395761 LINC01547P58512 204 aaPredicted RBP9.64□□□□□ -0.87
CXCL1-201ENST00000395761 ATXN8Q156A1 80 aa9.64□□□□□ -0.87
CXCL1-201ENST00000395761 OCIAD2Q56VL3 154 aa9.64□□□□□ -0.87
CXCL1-201ENST00000395761 TEX49A0A1B0GTD5 131 aa9.62□□□□□ -0.87
CXCL1-201ENST00000395761 LINC00304Q8N9R0 145 aa9.62□□□□□ -0.87
CXCL1-201ENST00000395761 DNAL4O96015 105 aa9.61□□□□□ -0.87
CXCL1-201ENST00000395761 GHRHP01286 108 aa9.61□□□□□ -0.87
CXCL1-201ENST00000395761 Q8N377 158 aa9.61□□□□□ -0.87
CXCL1-201ENST00000395761 PPDPFLQ8WWR9 84 aa9.61□□□□□ -0.87
CXCL1-201ENST00000395761 IGLV9-49A0A0B4J1Y8 123 aa9.6□□□□□ -0.87
CXCL1-201ENST00000395761 H3BQ85 93 aa9.6□□□□□ -0.87
CXCL1-201ENST00000395761 DEFB105AQ8NG35 78 aa9.59□□□□□ -0.87
CXCL1-201ENST00000395761 MOBPQ13875 183 aa9.58□□□□□ -0.88
CXCL1-201ENST00000395761 Q8NBF4 154 aa9.58□□□□□ -0.88
CXCL1-201ENST00000395761 ORMDL1Q9P0S3 153 aa9.58□□□□□ -0.88
CXCL1-201ENST00000395761 SPCS1Q9Y6A9 102 aa9.58□□□□□ -0.88
CXCL1-201ENST00000395761 SMIM29Q86T20 159 aa9.56□□□□□ -0.88
CXCL1-201ENST00000395761 TMEM256-PLSCR3K7ERE1 68 aa9.55□□□□□ -0.88
CXCL1-201ENST00000395761 H3BMG7 143 aa9.54□□□□□ -0.88
CXCL1-201ENST00000395761 K7EP34 96 aa9.54□□□□□ -0.88
CXCL1-201ENST00000395761 SSBP3-AS1Q7Z2R9 100 aa9.54□□□□□ -0.88
CXCL1-201ENST00000395761 LAMTOR3Q9UHA4 124 aa9.54□□□□□ -0.88
CXCL1-201ENST00000395761 BAALC-AS2P0C853 105 aa9.53□□□□□ -0.88
CXCL1-201ENST00000395761 C9orf153Q5TBE3 101 aa9.53□□□□□ -0.88
CXCL1-201ENST00000395761 SPAG11AQ6PDA7 123 aa9.52□□□□□ -0.89
CXCL1-201ENST00000395761 GTF2H5Q6ZYL4 71 aa9.52□□□□□ -0.89
CXCL1-201ENST00000395761 C9JAW5 83 aa9.51□□□□□ -0.89
CXCL1-201ENST00000395761 UBE2V1Q13404 147 aa9.51□□□□□ -0.89
CXCL1-201ENST00000395761 PRR4Q16378 134 aa9.51□□□□□ -0.89
CXCL1-201ENST00000395761 C4orf48Q5BLP8 95 aa9.51□□□□□ -0.89
CXCL1-201ENST00000395761 RETNLBQ9BQ08 111 aa9.5□□□□□ -0.89
CXCL1-201ENST00000395761 NDUFV3P56181 108 aaKnown RBP9.49□□□□□ -0.89
CXCL1-201ENST00000395761 IGLV8-61A0A075B6I0 122 aa9.48□□□□□ -0.89
CXCL1-201ENST00000395761 LRP2P98164 4655 aa9.47□□□□□ -0.89
CXCL1-201ENST00000395761 H3BT86 120 aa9.47□□□□□ -0.89
CXCL1-201ENST00000395761 F8WEM9 126 aa9.45□□□□□ -0.9
CXCL1-201ENST00000395761 SPINK1P00995 79 aa9.45□□□□□ -0.9
CXCL1-201ENST00000395761 PRO0461Q9UI25 63 aa9.45□□□□□ -0.9
CXCL1-201ENST00000395761 LPAP08519 4548 aa9.45□□□□□ -0.9
CXCL1-201ENST00000395761 UBR4Q5T4S7 5183 aa9.44□□□□□ -0.9
CXCL1-201ENST00000395761 A0A1B0GV90 55 aa9.44□□□□□ -0.9
CXCL1-201ENST00000395761 ANKRD29Q8N6D5 301 aa9.44□□□□□ -0.9
CXCL1-201ENST00000395761 Q6JHZ5 121 aa9.42□□□□□ -0.9
CXCL1-201ENST00000395761 A0A0G2JQZ4 141 aa9.41□□□□□ -0.9
CXCL1-201ENST00000395761 F8W1H4 67 aa9.41□□□□□ -0.9
CXCL1-201ENST00000395761 SMCPP49901 116 aaPredicted RBP9.41□□□□□ -0.9
CXCL1-201ENST00000395761 HRCT1Q6UXD1 115 aa9.41□□□□□ -0.9
CXCL1-201ENST00000395761 MTURNQ8N3F0 131 aa9.41□□□□□ -0.9
CXCL1-201ENST00000395761 JMJD7-PLA2G4BH0Y9G9 81 aa9.39□□□□□ -0.91
CXCL1-201ENST00000395761 RPS29P62273 56 aaKnown RBP9.39□□□□□ -0.91
CXCL1-201ENST00000395761 OBSCN-AS1Q96MR7 158 aa9.39□□□□□ -0.91
CXCL1-201ENST00000395761 RBM3P98179 157 aaKnown RBP9.38□□□□□ -0.91
CXCL1-201ENST00000395761 IGFL1Q6UW32 110 aa9.37□□□□□ -0.91
CXCL1-201ENST00000395761 IGLV7-46A0A075B6I9 117 aa9.36□□□□□ -0.91
CXCL1-201ENST00000395761 CD164Q04900 197 aa9.35□□□□□ -0.91
CXCL1-201ENST00000395761 TRBV7-4A0A0J9YYF1 115 aa9.34□□□□□ -0.91
CXCL1-201ENST00000395761 DSCR8Q96T75 97 aa9.33□□□□□ -0.92
CXCL1-201ENST00000395761 Q6Q795 121 aa9.32□□□□□ -0.92
CXCL1-201ENST00000395761 FP248Q71RG6 208 aaPredicted RBP9.32□□□□□ -0.92
CXCL1-201ENST00000395761 LOC110117498A0A087WWA1 95 aa9.31□□□□□ -0.92
CXCL1-201ENST00000395761 PDE6GP18545 87 aa9.31□□□□□ -0.92
CXCL1-201ENST00000395761 A0A1B0GV72 72 aa9.3□□□□□ -0.92
CXCL1-201ENST00000395761 TEN1Q86WV5 123 aa9.3□□□□□ -0.92
CXCL1-201ENST00000395761 LIMD2Q9BT23 127 aa9.29□□□□□ -0.92
CXCL1-201ENST00000395761 A0A1W2PNM2 257 aa9.28□□□□□ -0.92
CXCL1-201ENST00000395761 C21orf62-AS1Q17RA5 79 aa9.28□□□□□ -0.92
CXCL1-201ENST00000395761 TPRXLQ17RH7 258 aa9.28□□□□□ -0.92
CXCL1-201ENST00000395761 Q6ZQT0 140 aa9.28□□□□□ -0.92
CXCL1-201ENST00000395761 C14orf132Q9NPU4 83 aa9.28□□□□□ -0.92
CXCL1-201ENST00000395761 ETDBQ3ZM63 59 aa9.27□□□□□ -0.93
CXCL1-201ENST00000395761 TRBV7-7A0A0K0K1E9 115 aa9.25□□□□□ -0.93
CXCL1-201ENST00000395761 CCKP06307 115 aa9.25□□□□□ -0.93
CXCL1-201ENST00000395761 Q5XG85 94 aa9.25□□□□□ -0.93
CXCL1-201ENST00000395761 KRTAP13-3Q3SY46 172 aa9.24□□□□□ -0.93
CXCL1-201ENST00000395761 A0A1B0GW54 56 aa9.23□□□□□ -0.93
CXCL1-201ENST00000395761 CDIP1Q9H305 208 aa9.23□□□□□ -0.93
CXCL1-201ENST00000395761 RNF213Q63HN8 5207 aa9.22□□□□□ -0.93
CXCL1-201ENST00000395761 C1orf195Q5TG92 126 aa9.2□□□□□ -0.94
CXCL1-201ENST00000395761 ASB16-AS1Q495Z4 193 aa9.18□□□□□ -0.94
CXCL1-201ENST00000395761 LCE2AQ5TA79 106 aaPredicted RBP9.18□□□□□ -0.94
CXCL1-201ENST00000395761 VPS25Q9BRG1 176 aa9.18□□□□□ -0.94
CXCL1-201ENST00000395761 A0A087WSZ3 146 aa9.17□□□□□ -0.94
CXCL1-201ENST00000395761 SS18L2Q9UHA2 77 aa9.16□□□□□ -0.94
CXCL1-201ENST00000395761 MUC17Q685J3 4493 aa9.11□□□□□ -0.95
CXCL1-201ENST00000395761 C9orf92A6NGG3 77 aa9.1□□□□□ -0.95
CXCL1-201ENST00000395761 LCE2CQ5TA81 110 aa9.09□□□□□ -0.95
CXCL1-201ENST00000395761 XP32Q5T750 250 aa9.08□□□□□ -0.96
CXCL1-201ENST00000395761 Q96NJ1 140 aa9.07□□□□□ -0.96
CXCL1-201ENST00000395761 LINC00472Q9H8W2 130 aa9.07□□□□□ -0.96
CXCL1-201ENST00000395761 ACYP1P07311 99 aa9.05□□□□□ -0.96
CXCL1-201ENST00000395761 NREPQ16612 68 aa9.05□□□□□ -0.96
CXCL1-201ENST00000395761 MUC2Q02817 5179 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms