RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 GCN1Q92616 2671 aaKnown RBP8.8□□□□□ -1
PPARGC1B-203ENST00000394320 LINC00472Q9H8W2 130 aa8.79□□□□□ -1
PPARGC1B-203ENST00000394320 NBEAL1Q6ZS30 2694 aa8.78□□□□□ -1
PPARGC1B-203ENST00000394320 ZCCHC13Q8WW36 166 aaKnown RBP8.78□□□□□ -1
PPARGC1B-203ENST00000394320 LAMA3Q16787 3333 aa8.76□□□□□ -1.01
PPARGC1B-203ENST00000394320 CRIPTQ9P021 101 aa8.76□□□□□ -1.01
PPARGC1B-203ENST00000394320 Q6ZR54 194 aa8.75□□□□□ -1.01
PPARGC1B-203ENST00000394320 HRES1P13985 223 aa8.74□□□□□ -1.01
PPARGC1B-203ENST00000394320 LINC00483Q53H64 154 aa8.73□□□□□ -1.01
PPARGC1B-203ENST00000394320 UBR5O95071 2799 aaPredicted RBP8.72□□□□□ -1.01
PPARGC1B-203ENST00000394320 KRTAP10-1P60331 282 aa8.71□□□□□ -1.01
PPARGC1B-203ENST00000394320 WDFY4Q6ZS81 3184 aa8.71□□□□□ -1.01
PPARGC1B-203ENST00000394320 CFAP54Q96N23 3096 aa8.71□□□□□ -1.02
PPARGC1B-203ENST00000394320 Q1T7F1 81 aa8.7□□□□□ -1.02
PPARGC1B-203ENST00000394320 CDC42SE1Q9NRR8 79 aa8.69□□□□□ -1.02
PPARGC1B-203ENST00000394320 MKI67P46013 3256 aaKnown RBP8.69□□□□□ -1.02
PPARGC1B-203ENST00000394320 A0A0C4DFX4 3053 aa8.69□□□□□ -1.02
PPARGC1B-203ENST00000394320 KRTAP4-16G5E9R7 235 aaPredicted RBP8.68□□□□□ -1.02
PPARGC1B-203ENST00000394320 NSD1Q96L73 2696 aaPredicted RBP8.68□□□□□ -1.02
PPARGC1B-203ENST00000394320 KRTAP10-2P60368 255 aa8.67□□□□□ -1.02
PPARGC1B-203ENST00000394320 Q5VSD8 79 aa8.66□□□□□ -1.02
PPARGC1B-203ENST00000394320 SPINT4Q6UDR6 99 aa8.66□□□□□ -1.02
PPARGC1B-203ENST00000394320 ITPR2Q14571 2701 aa8.65□□□□□ -1.02
PPARGC1B-203ENST00000394320 Q5W150 140 aa8.63□□□□□ -1.03
PPARGC1B-203ENST00000394320 SEC61BP60468 96 aaKnown RBP8.63□□□□□ -1.03
PPARGC1B-203ENST00000394320 KRTAP21-3Q3LHN1 58 aa8.62□□□□□ -1.03
PPARGC1B-203ENST00000394320 FP248Q71RG6 208 aaPredicted RBP8.62□□□□□ -1.03
PPARGC1B-203ENST00000394320 KMT2BQ9UMN6 2715 aaPredicted RBP8.62□□□□□ -1.03
PPARGC1B-203ENST00000394320 CSAG1Q6PB30 78 aa8.61□□□□□ -1.03
PPARGC1B-203ENST00000394320 Q8N9P0 234 aaPredicted RBP8.61□□□□□ -1.03
PPARGC1B-203ENST00000394320 A0A1B0GU33 70 aa8.6□□□□□ -1.03
PPARGC1B-203ENST00000394320 LINC01554Q52M75 96 aa8.6□□□□□ -1.03
PPARGC1B-203ENST00000394320 FLNCQ14315 2725 aa8.6□□□□□ -1.03
PPARGC1B-203ENST00000394320 MAP1AP78559 2803 aaPredicted RBP8.59□□□□□ -1.03
PPARGC1B-203ENST00000394320 LINC01558Q9Y6Z2 57 aa8.59□□□□□ -1.03
PPARGC1B-203ENST00000394320 SPINK7P58062 85 aa8.58□□□□□ -1.04
PPARGC1B-203ENST00000394320 A0A0D9SG42 100 aa8.58□□□□□ -1.04
PPARGC1B-203ENST00000394320 KTN1-AS1Q86SY8 53 aa8.57□□□□□ -1.04
PPARGC1B-203ENST00000394320 PRUNE2Q8WUY3 3088 aa8.57□□□□□ -1.04
PPARGC1B-203ENST00000394320 Q75L30 129 aa8.57□□□□□ -1.04
PPARGC1B-203ENST00000394320 NBEAL2Q6ZNJ1 2754 aa8.56□□□□□ -1.04
PPARGC1B-203ENST00000394320 PANO1I0J062 215 aa8.55□□□□□ -1.04
PPARGC1B-203ENST00000394320 ITPR1Q14643 2758 aa8.55□□□□□ -1.04
PPARGC1B-203ENST00000394320 LAMA2P24043 3122 aaKnown RBP8.55□□□□□ -1.04
PPARGC1B-203ENST00000394320 Q6ZRN7 208 aaPredicted RBP8.54□□□□□ -1.04
PPARGC1B-203ENST00000394320 S4R3F8 94 aa8.54□□□□□ -1.04
PPARGC1B-203ENST00000394320 LCA10Q71F78 164 aa8.52□□□□□ -1.04
PPARGC1B-203ENST00000394320 TRIOO75962 3097 aa8.51□□□□□ -1.05
PPARGC1B-203ENST00000394320 DMAC1Q96GE9 116 aa8.51□□□□□ -1.05
PPARGC1B-203ENST00000394320 STAB2Q8WWQ8 2551 aa8.5□□□□□ -1.05
PPARGC1B-203ENST00000394320 RPS29P62273 56 aaKnown RBP8.5□□□□□ -1.05
PPARGC1B-203ENST00000394320 ASB16-AS1Q495Z4 193 aa8.5□□□□□ -1.05
PPARGC1B-203ENST00000394320 BRCA2P51587 3418 aa8.49□□□□□ -1.05
PPARGC1B-203ENST00000394320 M0R2T5 61 aa8.49□□□□□ -1.05
PPARGC1B-203ENST00000394320 OXTP01178 125 aa8.49□□□□□ -1.05
PPARGC1B-203ENST00000394320 CAMK2N1Q7Z7J9 78 aa8.47□□□□□ -1.05
PPARGC1B-203ENST00000394320 VPS13AQ96RL7 3174 aa8.46□□□□□ -1.05
PPARGC1B-203ENST00000394320 KRTAP29-1A8MX34 341 aaPredicted RBP8.46□□□□□ -1.06
PPARGC1B-203ENST00000394320 FRYQ5TBA9 3013 aa8.45□□□□□ -1.06
PPARGC1B-203ENST00000394320 HIVEP1P15822 2718 aa8.43□□□□□ -1.06
PPARGC1B-203ENST00000394320 A0A087X002 238 aa8.42□□□□□ -1.06
PPARGC1B-203ENST00000394320 FLG2Q5D862 2391 aaPredicted RBP8.39□□□□□ -1.07
PPARGC1B-203ENST00000394320 CYSTM1Q9H1C7 97 aa8.39□□□□□ -1.07
PPARGC1B-203ENST00000394320 Q5XG85 94 aa8.38□□□□□ -1.07
PPARGC1B-203ENST00000394320 UNC80Q8N2C7 3258 aa8.36□□□□□ -1.07
PPARGC1B-203ENST00000394320 KRTAP13-1Q8IUC0 172 aa8.35□□□□□ -1.07
PPARGC1B-203ENST00000394320 R4GN34 69 aa8.35□□□□□ -1.07
PPARGC1B-203ENST00000394320 KRTAP7-1Q8IUC3 87 aa8.35□□□□□ -1.07
PPARGC1B-203ENST00000394320 UTP20O75691 2785 aaKnown RBP8.34□□□□□ -1.07
PPARGC1B-203ENST00000394320 KRTAP11-1Q8IUC1 163 aa8.34□□□□□ -1.07
PPARGC1B-203ENST00000394320 DMBT1Q9UGM3 2413 aaPredicted RBP8.33□□□□□ -1.08
PPARGC1B-203ENST00000394320 NIPBLQ6KC79 2804 aaeCLIP8.33□□□□□ -1.08
PPARGC1B-203ENST00000394320 ATMQ13315 3056 aa8.33□□□□□ -1.08
PPARGC1B-203ENST00000394320 Q5VV11 94 aa8.32□□□□□ -1.08
PPARGC1B-203ENST00000394320 XIRP2A4UGR9 3374 aa8.31□□□□□ -1.08
PPARGC1B-203ENST00000394320 APCP25054 2843 aa8.3□□□□□ -1.08
PPARGC1B-203ENST00000394320 FRYLO94915 3013 aa8.29□□□□□ -1.08
PPARGC1B-203ENST00000394320 COL12A1Q99715 3063 aa8.29□□□□□ -1.08
PPARGC1B-203ENST00000394320 TACC2O95359 2948 aa8.29□□□□□ -1.08
PPARGC1B-203ENST00000394320 LUZP6Q538Z0 58 aa8.25□□□□□ -1.09
PPARGC1B-203ENST00000394320 RPL37P61927 97 aaKnown RBP8.24□□□□□ -1.09
PPARGC1B-203ENST00000394320 TENM4Q6N022 2769 aa8.23□□□□□ -1.09
PPARGC1B-203ENST00000394320 KRTAP13-2Q52LG2 175 aa8.23□□□□□ -1.09
PPARGC1B-203ENST00000394320 H1FX-AS1Q4G0G2 97 aa8.22□□□□□ -1.09
PPARGC1B-203ENST00000394320 CDH23Q9H251 3354 aa8.22□□□□□ -1.09
PPARGC1B-203ENST00000394320 NOTCH2NLQ7Z3S9 236 aa8.21□□□□□ -1.1
PPARGC1B-203ENST00000394320 KALRNO60229 2985 aa8.19□□□□□ -1.1
PPARGC1B-203ENST00000394320 DMXL2Q8TDJ6 3036 aa8.18□□□□□ -1.1
PPARGC1B-203ENST00000394320 LRBAP50851 2863 aa8.17□□□□□ -1.1
PPARGC1B-203ENST00000394320 ADGRG4Q8IZF6 3080 aa8.17□□□□□ -1.1
PPARGC1B-203ENST00000394320 M0QZ58 72 aa8.17□□□□□ -1.1
PPARGC1B-203ENST00000394320 LAMA1P25391 3075 aa8.13□□□□□ -1.11
PPARGC1B-203ENST00000394320 ZZEF1O43149 2961 aa8.12□□□□□ -1.11
PPARGC1B-203ENST00000394320 TNRC18O15417 2968 aaPredicted RBP8.12□□□□□ -1.11
PPARGC1B-203ENST00000394320 ROMO1P60602 79 aa8.1□□□□□ -1.11
PPARGC1B-203ENST00000394320 SZT2Q5T011 3432 aa8.1□□□□□ -1.11
PPARGC1B-203ENST00000394320 ADM2Q7Z4H4 148 aa8.1□□□□□ -1.11
PPARGC1B-203ENST00000394320 EYSQ5T1H1 3165 aa8.09□□□□□ -1.11
PPARGC1B-203ENST00000394320 NBEAQ8NFP9 2946 aa8.06□□□□□ -1.12
PPARGC1B-203ENST00000394320 BOD1L1Q8NFC6 3051 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms