RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 F8P00451 2351 aa5.29□□□□□ -1.56
GABRA1-202ENST00000393943 PRR26Q8N8Z3 221 aa5.29□□□□□ -1.56
GABRA1-202ENST00000393943 APLNQ9ULZ1 77 aa5.28□□□□□ -1.56
GABRA1-202ENST00000393943 SPINK1P00995 79 aa5.28□□□□□ -1.56
GABRA1-202ENST00000393943 ITPR3Q14573 2671 aa5.28□□□□□ -1.56
GABRA1-202ENST00000393943 A6NN06 94 aa5.27□□□□□ -1.57
GABRA1-202ENST00000393943 K7EIL1 84 aa5.27□□□□□ -1.57
GABRA1-202ENST00000393943 SPTBN5Q9NRC6 3674 aaKnown RBP5.27□□□□□ -1.57
GABRA1-202ENST00000393943 A0A087X002 238 aa5.27□□□□□ -1.57
GABRA1-202ENST00000393943 LINC00483Q53H64 154 aa5.27□□□□□ -1.57
GABRA1-202ENST00000393943 LINC01554Q52M75 96 aa5.27□□□□□ -1.57
GABRA1-202ENST00000393943 PSORS1C2Q9UIG4 136 aa5.26□□□□□ -1.57
GABRA1-202ENST00000393943 A0A087WTM6 91 aa5.26□□□□□ -1.57
GABRA1-202ENST00000393943 IGLV7-43P04211 117 aa5.26□□□□□ -1.57
GABRA1-202ENST00000393943 SPINK7P58062 85 aa5.25□□□□□ -1.57
GABRA1-202ENST00000393943 SPACA4Q8TDM5 124 aa5.25□□□□□ -1.57
GABRA1-202ENST00000393943 LRBAP50851 2863 aa5.25□□□□□ -1.57
GABRA1-202ENST00000393943 TACC2O95359 2948 aa5.25□□□□□ -1.57
GABRA1-202ENST00000393943 DMAC1Q96GE9 116 aa5.24□□□□□ -1.57
GABRA1-202ENST00000393943 GCN1Q92616 2671 aaKnown RBP5.24□□□□□ -1.57
GABRA1-202ENST00000393943 HRNRQ86YZ3 2850 aaPredicted RBP5.24□□□□□ -1.57
GABRA1-202ENST00000393943 FREM2Q5SZK8 3169 aa5.22□□□□□ -1.57
GABRA1-202ENST00000393943 LY6G6CO95867 125 aa5.22□□□□□ -1.57
GABRA1-202ENST00000393943 KRTAP7-1Q8IUC3 87 aa5.21□□□□□ -1.58
GABRA1-202ENST00000393943 COL6A3P12111 3177 aa5.21□□□□□ -1.58
GABRA1-202ENST00000393943 WWC2-AS2Q96NR7 200 aa5.2□□□□□ -1.58
GABRA1-202ENST00000393943 PLAC8Q9NZF1 115 aa5.2□□□□□ -1.58
GABRA1-202ENST00000393943 FASNP49327 2511 aaKnown RBP5.2□□□□□ -1.58
GABRA1-202ENST00000393943 Q96NJ1 140 aa5.2□□□□□ -1.58
GABRA1-202ENST00000393943 SPEGQ15772 3267 aa5.2□□□□□ -1.58
GABRA1-202ENST00000393943 BOD1L1Q8NFC6 3051 aa5.19□□□□□ -1.58
GABRA1-202ENST00000393943 TEX15Q9BXT5 2789 aa5.19□□□□□ -1.58
GABRA1-202ENST00000393943 TYMSOSQ8TAI1 123 aa5.19□□□□□ -1.58
GABRA1-202ENST00000393943 USP34Q70CQ2 3546 aa5.19□□□□□ -1.58
GABRA1-202ENST00000393943 Q5W150 140 aa5.19□□□□□ -1.58
GABRA1-202ENST00000393943 PLA2G1BP04054 148 aaKnown RBP5.18□□□□□ -1.58
GABRA1-202ENST00000393943 SPATA8Q6RVD6 105 aa5.18□□□□□ -1.58
GABRA1-202ENST00000393943 CENPEQ02224 2701 aa5.17□□□□□ -1.58
GABRA1-202ENST00000393943 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.16□□□□□ -1.58
GABRA1-202ENST00000393943 ATRQ13535 2644 aa5.15□□□□□ -1.58
GABRA1-202ENST00000393943 ANAPC11Q9NYG5 84 aa5.15□□□□□ -1.59
GABRA1-202ENST00000393943 UNC79Q9P2D8 2635 aa5.15□□□□□ -1.59
GABRA1-202ENST00000393943 MAP1AP78559 2803 aaPredicted RBP5.15□□□□□ -1.59
GABRA1-202ENST00000393943 KRTAP13-1Q8IUC0 172 aa5.14□□□□□ -1.59
GABRA1-202ENST00000393943 KRTAP1-5Q9BYS1 174 aa5.14□□□□□ -1.59
GABRA1-202ENST00000393943 PRAC1Q96KF2 57 aa5.12□□□□□ -1.59
GABRA1-202ENST00000393943 IGSF10Q6WRI0 2623 aa5.12□□□□□ -1.59
GABRA1-202ENST00000393943 SETXQ7Z333 2677 aaKnown RBP5.11□□□□□ -1.59
GABRA1-202ENST00000393943 NBEAL2Q6ZNJ1 2754 aa5.11□□□□□ -1.59
GABRA1-202ENST00000393943 ATMQ13315 3056 aa5.1□□□□□ -1.59
GABRA1-202ENST00000393943 ITPR1Q14643 2758 aa5.1□□□□□ -1.59
GABRA1-202ENST00000393943 LINC00304Q8N9R0 145 aa5.09□□□□□ -1.59
GABRA1-202ENST00000393943 A0A1B0GU33 70 aa5.09□□□□□ -1.59
GABRA1-202ENST00000393943 LOC400499M0QZD8 3231 aa5.09□□□□□ -1.59
GABRA1-202ENST00000393943 CFAP46Q8IYW2 2715 aa5.09□□□□□ -1.6
GABRA1-202ENST00000393943 DMXL2Q8TDJ6 3036 aa5.08□□□□□ -1.6
GABRA1-202ENST00000393943 A8MU10 97 aa5.08□□□□□ -1.6
GABRA1-202ENST00000393943 CSAG1Q6PB30 78 aa5.07□□□□□ -1.6
GABRA1-202ENST00000393943 FLNCQ14315 2725 aa5.07□□□□□ -1.6
GABRA1-202ENST00000393943 KMT2BQ9UMN6 2715 aaPredicted RBP5.06□□□□□ -1.6
GABRA1-202ENST00000393943 USP24Q9UPU5 2620 aa5.06□□□□□ -1.6
GABRA1-202ENST00000393943 KRTAP11-1Q8IUC1 163 aa5.05□□□□□ -1.6
GABRA1-202ENST00000393943 EYSQ5T1H1 3165 aa5.05□□□□□ -1.6
GABRA1-202ENST00000393943 SPINT4Q6UDR6 99 aa5.05□□□□□ -1.6
GABRA1-202ENST00000393943 Q8N1X5 172 aa5.05□□□□□ -1.6
GABRA1-202ENST00000393943 UTP20O75691 2785 aaKnown RBP5.04□□□□□ -1.6
GABRA1-202ENST00000393943 H3BS24 57 aa5.04□□□□□ -1.6
GABRA1-202ENST00000393943 MYO15AQ9UKN7 3530 aa5.03□□□□□ -1.6
GABRA1-202ENST00000393943 CRIPTQ9P021 101 aa5.02□□□□□ -1.61
GABRA1-202ENST00000393943 TEP1Q99973 2627 aaKnown RBP5.02□□□□□ -1.61
GABRA1-202ENST00000393943 NOTCH2NLQ7Z3S9 236 aa5.02□□□□□ -1.61
GABRA1-202ENST00000393943 PANO1I0J062 215 aa5.01□□□□□ -1.61
GABRA1-202ENST00000393943 Q6ZRN7 208 aaPredicted RBP5□□□□□ -1.61
GABRA1-202ENST00000393943 WDFY3Q8IZQ1 3526 aa5□□□□□ -1.61
GABRA1-202ENST00000393943 HECTD1Q9ULT8 2610 aa5□□□□□ -1.61
GABRA1-202ENST00000393943 DMXL1Q9Y485 3027 aa4.99□□□□□ -1.61
GABRA1-202ENST00000393943 ZANQ9Y493 2812 aa4.99□□□□□ -1.61
GABRA1-202ENST00000393943 HELZ2Q9BYK8 2649 aaKnown RBP4.98□□□□□ -1.61
GABRA1-202ENST00000393943 COL12A1Q99715 3063 aa4.98□□□□□ -1.61
GABRA1-202ENST00000393943 RPS29P62273 56 aaKnown RBP4.97□□□□□ -1.61
GABRA1-202ENST00000393943 H1FX-AS1Q4G0G2 97 aa4.96□□□□□ -1.61
GABRA1-202ENST00000393943 DCHS2Q6V1P9 2916 aa4.95□□□□□ -1.62
GABRA1-202ENST00000393943 APCP25054 2843 aa4.94□□□□□ -1.62
GABRA1-202ENST00000393943 CFAP47Q6ZTR5 3102 aa4.94□□□□□ -1.62
GABRA1-202ENST00000393943 MXRA5Q9NR99 2828 aa4.93□□□□□ -1.62
GABRA1-202ENST00000393943 MAST4O15021 2626 aa4.93□□□□□ -1.62
GABRA1-202ENST00000393943 KRTAP25-1Q3LHN0 102 aa4.93□□□□□ -1.62
GABRA1-202ENST00000393943 C9orf92A6NGG3 77 aa4.92□□□□□ -1.62
GABRA1-202ENST00000393943 ROMO1P60602 79 aa4.92□□□□□ -1.62
GABRA1-202ENST00000393943 UBR5O95071 2799 aaPredicted RBP4.92□□□□□ -1.62
GABRA1-202ENST00000393943 NIPBLQ6KC79 2804 aaeCLIP4.91□□□□□ -1.62
GABRA1-202ENST00000393943 RPL37P61927 97 aaKnown RBP4.9□□□□□ -1.62
GABRA1-202ENST00000393943 ADM2Q7Z4H4 148 aa4.9□□□□□ -1.63
GABRA1-202ENST00000393943 KRTAP13-3Q3SY46 172 aa4.89□□□□□ -1.63
GABRA1-202ENST00000393943 ASH1LQ9NR48 2969 aaKnown RBP4.87□□□□□ -1.63
GABRA1-202ENST00000393943 ITPR2Q14571 2701 aa4.87□□□□□ -1.63
GABRA1-202ENST00000393943 BAHCC1Q9P281 2608 aa4.87□□□□□ -1.63
GABRA1-202ENST00000393943 COX6B2Q6YFQ2 88 aa4.86□□□□□ -1.63
GABRA1-202ENST00000393943 FBN2P35556 2912 aa4.86□□□□□ -1.63
GABRA1-202ENST00000393943 NSD1Q96L73 2696 aaPredicted RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms