RNA–Protein interactions for RNA: ENST00000393743.7

DDX60-201, Transcript of DExD/H-box helicase 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX60, Length 6,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-201ENST00000393743 LINC00472Q9H8W2 130 aa4.38□□□□□ -1.71
DDX60-201ENST00000393743 ITPR3Q14573 2671 aa4.38□□□□□ -1.71
DDX60-201ENST00000393743 LINC01558Q9Y6Z2 57 aa4.37□□□□□ -1.71
DDX60-201ENST00000393743 Q75L30 129 aa4.37□□□□□ -1.71
DDX60-201ENST00000393743 SPINK7P58062 85 aa4.37□□□□□ -1.71
DDX60-201ENST00000393743 CR1P17927 2039 aa4.36□□□□□ -1.71
DDX60-201ENST00000393743 Q5W150 140 aa4.35□□□□□ -1.71
DDX60-201ENST00000393743 R4GN34 69 aa4.35□□□□□ -1.71
DDX60-201ENST00000393743 KRTAP26-1Q6PEX3 210 aa4.34□□□□□ -1.71
DDX60-201ENST00000393743 KRTAP21-3Q3LHN1 58 aa4.34□□□□□ -1.72
DDX60-201ENST00000393743 RANBP2P49792 3224 aaKnown RBP4.33□□□□□ -1.72
DDX60-201ENST00000393743 RPS29P62273 56 aaKnown RBP4.33□□□□□ -1.72
DDX60-201ENST00000393743 Q6ZR54 194 aa4.33□□□□□ -1.72
DDX60-201ENST00000393743 KRTAP10-1P60331 282 aa4.33□□□□□ -1.72
DDX60-201ENST00000393743 C5orf42Q9H799 3197 aa4.32□□□□□ -1.72
DDX60-201ENST00000393743 Q8N9P0 234 aaPredicted RBP4.32□□□□□ -1.72
DDX60-201ENST00000393743 KRTAP1-5Q9BYS1 174 aa4.32□□□□□ -1.72
DDX60-201ENST00000393743 PCNTO95613 3336 aa4.3□□□□□ -1.72
DDX60-201ENST00000393743 AKAP13Q12802 2813 aa4.28□□□□□ -1.72
DDX60-201ENST00000393743 ASB16-AS1Q495Z4 193 aa4.28□□□□□ -1.72
DDX60-201ENST00000393743 KRTAP10-2P60368 255 aa4.28□□□□□ -1.73
DDX60-201ENST00000393743 Q8NDZ9 215 aa4.27□□□□□ -1.73
DDX60-201ENST00000393743 CFAP46Q8IYW2 2715 aa4.27□□□□□ -1.73
DDX60-201ENST00000393743 RPL37P61927 97 aaKnown RBP4.27□□□□□ -1.73
DDX60-201ENST00000393743 PLAC4Q8WY50 150 aa4.26□□□□□ -1.73
DDX60-201ENST00000393743 KRTAP4-16G5E9R7 235 aaPredicted RBP4.24□□□□□ -1.73
DDX60-201ENST00000393743 M0QZ58 72 aa4.23□□□□□ -1.73
DDX60-201ENST00000393743 FLG2Q5D862 2391 aaPredicted RBP4.22□□□□□ -1.73
DDX60-201ENST00000393743 A0A0A0MQY5 61 aa4.22□□□□□ -1.73
DDX60-201ENST00000393743 Q5XG85 94 aa4.22□□□□□ -1.73
DDX60-201ENST00000393743 H1FX-AS1Q4G0G2 97 aa4.21□□□□□ -1.74
DDX60-201ENST00000393743 MGAQ8IWI9 3026 aa4.21□□□□□ -1.74
DDX60-201ENST00000393743 ROMO1P60602 79 aa4.2□□□□□ -1.74
DDX60-201ENST00000393743 CENPEQ02224 2701 aa4.2□□□□□ -1.74
DDX60-201ENST00000393743 A0A0C4DFX4 3053 aa4.19□□□□□ -1.74
DDX60-201ENST00000393743 TEP1Q99973 2627 aaKnown RBP4.19□□□□□ -1.74
DDX60-201ENST00000393743 IGSF10Q6WRI0 2623 aa4.19□□□□□ -1.74
DDX60-201ENST00000393743 UNC79Q9P2D8 2635 aa4.19□□□□□ -1.74
DDX60-201ENST00000393743 LAMA3Q16787 3333 aa4.19□□□□□ -1.74
DDX60-201ENST00000393743 PANO1I0J062 215 aa4.18□□□□□ -1.74
DDX60-201ENST00000393743 KRTAP29-1A8MX34 341 aaPredicted RBP4.18□□□□□ -1.74
DDX60-201ENST00000393743 MKI67P46013 3256 aaKnown RBP4.18□□□□□ -1.74
DDX60-201ENST00000393743 SETXQ7Z333 2677 aaKnown RBP4.18□□□□□ -1.74
DDX60-201ENST00000393743 Q5VV11 94 aa4.17□□□□□ -1.74
DDX60-201ENST00000393743 Q6ZRN7 208 aaPredicted RBP4.17□□□□□ -1.74
DDX60-201ENST00000393743 COL6A5A8TX70 2615 aa4.17□□□□□ -1.74
DDX60-201ENST00000393743 NBEAL1Q6ZS30 2694 aa4.16□□□□□ -1.74
DDX60-201ENST00000393743 A0A087X002 238 aa4.15□□□□□ -1.74
DDX60-201ENST00000393743 ADM2Q7Z4H4 148 aa4.15□□□□□ -1.75
DDX60-201ENST00000393743 NOTCH1P46531 2555 aa4.13□□□□□ -1.75
DDX60-201ENST00000393743 TEX15Q9BXT5 2789 aa4.12□□□□□ -1.75
DDX60-201ENST00000393743 CHD6Q8TD26 2715 aa4.12□□□□□ -1.75
DDX60-201ENST00000393743 CFAP54Q96N23 3096 aa4.12□□□□□ -1.75
DDX60-201ENST00000393743 TRIOO75962 3097 aa4.12□□□□□ -1.75
DDX60-201ENST00000393743 DSPP15924 2871 aaKnown RBP4.11□□□□□ -1.75
DDX60-201ENST00000393743 BRCA2P51587 3418 aa4.11□□□□□ -1.75
DDX60-201ENST00000393743 BAHCC1Q9P281 2608 aa4.11□□□□□ -1.75
DDX60-201ENST00000393743 LAMA2P24043 3122 aaKnown RBP4.11□□□□□ -1.75
DDX60-201ENST00000393743 DMBT1Q9UGM3 2413 aaPredicted RBP4.09□□□□□ -1.75
DDX60-201ENST00000393743 KRTAP13-1Q8IUC0 172 aa4.09□□□□□ -1.76
DDX60-201ENST00000393743 WDFY4Q6ZS81 3184 aa4.08□□□□□ -1.76
DDX60-201ENST00000393743 SPATA8Q6RVD6 105 aa4.07□□□□□ -1.76
DDX60-201ENST00000393743 A8MUU9 505 aa4.07□□□□□ -1.76
DDX60-201ENST00000393743 NOTCH2NLQ7Z3S9 236 aa4.06□□□□□ -1.76
DDX60-201ENST00000393743 NSD1Q96L73 2696 aaPredicted RBP4.06□□□□□ -1.76
DDX60-201ENST00000393743 FLNCQ14315 2725 aa4.06□□□□□ -1.76
DDX60-201ENST00000393743 PRUNE2Q8WUY3 3088 aa4.06□□□□□ -1.76
DDX60-201ENST00000393743 KMT2BQ9UMN6 2715 aaPredicted RBP4.06□□□□□ -1.76
DDX60-201ENST00000393743 CYSTM1Q9H1C7 97 aa4.05□□□□□ -1.76
DDX60-201ENST00000393743 KRTAP13-2Q52LG2 175 aa4.05□□□□□ -1.76
DDX60-201ENST00000393743 PRAC1Q96KF2 57 aa4.05□□□□□ -1.76
DDX60-201ENST00000393743 VPS13AQ96RL7 3174 aa4.04□□□□□ -1.76
DDX60-201ENST00000393743 C20orf166-AS1Q96NR2 134 aa4.04□□□□□ -1.76
DDX60-201ENST00000393743 GCN1Q92616 2671 aaKnown RBP4.03□□□□□ -1.76
DDX60-201ENST00000393743 UNC80Q8N2C7 3258 aa4.03□□□□□ -1.76
DDX60-201ENST00000393743 MAP1AP78559 2803 aaPredicted RBP4.03□□□□□ -1.76
DDX60-201ENST00000393743 STAB2Q8WWQ8 2551 aa4.02□□□□□ -1.77
DDX60-201ENST00000393743 FREM2Q5SZK8 3169 aa4.02□□□□□ -1.77
DDX60-201ENST00000393743 KRTAP11-1Q8IUC1 163 aa4.01□□□□□ -1.77
DDX60-201ENST00000393743 KRTAP7-1Q8IUC3 87 aa4□□□□□ -1.77
DDX60-201ENST00000393743 FRYQ5TBA9 3013 aa3.99□□□□□ -1.77
DDX60-201ENST00000393743 TNRC18O15417 2968 aaPredicted RBP3.99□□□□□ -1.77
DDX60-201ENST00000393743 TNP1P09430 55 aa3.99□□□□□ -1.77
DDX60-201ENST00000393743 CDH23Q9H251 3354 aa3.99□□□□□ -1.77
DDX60-201ENST00000393743 H3BS24 57 aa3.98□□□□□ -1.77
DDX60-201ENST00000393743 LAMA1P25391 3075 aa3.97□□□□□ -1.77
DDX60-201ENST00000393743 UBR5O95071 2799 aaPredicted RBP3.97□□□□□ -1.77
DDX60-201ENST00000393743 ITPR1Q14643 2758 aa3.96□□□□□ -1.78
DDX60-201ENST00000393743 ITPR2Q14571 2701 aa3.95□□□□□ -1.78
DDX60-201ENST00000393743 SZT2Q5T011 3432 aa3.94□□□□□ -1.78
DDX60-201ENST00000393743 PP632Q6XCG6 107 aa3.94□□□□□ -1.78
DDX60-201ENST00000393743 TPRXLQ17RH7 258 aa3.93□□□□□ -1.78
DDX60-201ENST00000393743 APCP25054 2843 aa3.93□□□□□ -1.78
DDX60-201ENST00000393743 KRTAP25-1Q3LHN0 102 aa3.93□□□□□ -1.78
DDX60-201ENST00000393743 NBEAL2Q6ZNJ1 2754 aa3.93□□□□□ -1.78
DDX60-201ENST00000393743 ADGRG4Q8IZF6 3080 aa3.92□□□□□ -1.78
DDX60-201ENST00000393743 UTP20O75691 2785 aaKnown RBP3.92□□□□□ -1.78
DDX60-201ENST00000393743 ATMQ13315 3056 aa3.92□□□□□ -1.78
DDX60-201ENST00000393743 NIPBLQ6KC79 2804 aaeCLIP3.92□□□□□ -1.78
DDX60-201ENST00000393743 XIRP2A4UGR9 3374 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms