RNA–Protein interactions for RNA: ENST00000393359.6

TGFBRAP1-202, Transcript of transforming growth factor beta receptor associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBRAP1, Length 5,979 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBRAP1-202ENST00000393359 BPTFQ12830 3046 aa13.62□□□□□ -0.23
TGFBRAP1-202ENST00000393359 Q5VSD8 79 aa13.6□□□□□ -0.23
TGFBRAP1-202ENST00000393359 KRTAP10-1P60331 282 aa13.57□□□□□ -0.24
TGFBRAP1-202ENST00000393359 KRTAP10-2P60368 255 aa13.56□□□□□ -0.24
TGFBRAP1-202ENST00000393359 ADM2Q7Z4H4 148 aa13.55□□□□□ -0.24
TGFBRAP1-202ENST00000393359 USP24Q9UPU5 2620 aa13.55□□□□□ -0.24
TGFBRAP1-202ENST00000393359 SEC61BP60468 96 aaKnown RBP13.52□□□□□ -0.24
TGFBRAP1-202ENST00000393359 Q6ZR54 194 aa13.52□□□□□ -0.24
TGFBRAP1-202ENST00000393359 PANO1I0J062 215 aa13.47□□□□□ -0.25
TGFBRAP1-202ENST00000393359 PRRC2CQ9Y520 2896 aaKnown RBP13.46□□□□□ -0.26
TGFBRAP1-202ENST00000393359 MGAM2Q2M2H8 2515 aa13.45□□□□□ -0.26
TGFBRAP1-202ENST00000393359 HECTD1Q9ULT8 2610 aa13.42□□□□□ -0.26
TGFBRAP1-202ENST00000393359 KRTAP29-1A8MX34 341 aaPredicted RBP13.38□□□□□ -0.27
TGFBRAP1-202ENST00000393359 A0A087X002 238 aa13.36□□□□□ -0.27
TGFBRAP1-202ENST00000393359 NOTCH2NLQ7Z3S9 236 aa13.36□□□□□ -0.27
TGFBRAP1-202ENST00000393359 KRTAP4-16G5E9R7 235 aaPredicted RBP13.35□□□□□ -0.27
TGFBRAP1-202ENST00000393359 C5orf42Q9H799 3197 aa13.35□□□□□ -0.27
TGFBRAP1-202ENST00000393359 PLAC4Q8WY50 150 aa13.34□□□□□ -0.27
TGFBRAP1-202ENST00000393359 UTRNP46939 3433 aa13.31□□□□□ -0.28
TGFBRAP1-202ENST00000393359 FLNAP21333 2647 aaKnown RBP13.27□□□□□ -0.29
TGFBRAP1-202ENST00000393359 A8MU10 97 aa13.26□□□□□ -0.29
TGFBRAP1-202ENST00000393359 EPG5Q9HCE0 2579 aa13.24□□□□□ -0.29
TGFBRAP1-202ENST00000393359 LCE6AA0A183 80 aa13.22□□□□□ -0.29
TGFBRAP1-202ENST00000393359 ASB16-AS1Q495Z4 193 aa13.19□□□□□ -0.3
TGFBRAP1-202ENST00000393359 CEP350Q5VT06 3117 aa13.17□□□□□ -0.3
TGFBRAP1-202ENST00000393359 KRTAP11-1Q8IUC1 163 aa13.17□□□□□ -0.3
TGFBRAP1-202ENST00000393359 ITPR3Q14573 2671 aa13.17□□□□□ -0.3
TGFBRAP1-202ENST00000393359 KRTAP25-1Q3LHN0 102 aa13.14□□□□□ -0.31
TGFBRAP1-202ENST00000393359 A6NN06 94 aa13.12□□□□□ -0.31
TGFBRAP1-202ENST00000393359 KRTAP16-1A8MUX0 517 aa13.11□□□□□ -0.31
TGFBRAP1-202ENST00000393359 ATRQ13535 2644 aa13.08□□□□□ -0.32
TGFBRAP1-202ENST00000393359 C20orf166-AS1Q96NR2 134 aa13.06□□□□□ -0.32
TGFBRAP1-202ENST00000393359 FLNBO75369 2602 aaKnown RBP13.03□□□□□ -0.32
TGFBRAP1-202ENST00000393359 A8MUU9 505 aa13.01□□□□□ -0.33
TGFBRAP1-202ENST00000393359 KRTAP7-1Q8IUC3 87 aa12.95□□□□□ -0.34
TGFBRAP1-202ENST00000393359 NDUFAF8A1L188 74 aa12.92□□□□□ -0.34
TGFBRAP1-202ENST00000393359 CHD7Q9P2D1 2997 aa12.91□□□□□ -0.34
TGFBRAP1-202ENST00000393359 MAST4O15021 2626 aa12.91□□□□□ -0.34
TGFBRAP1-202ENST00000393359 PCNTO95613 3336 aa12.89□□□□□ -0.35
TGFBRAP1-202ENST00000393359 CFAP54Q96N23 3096 aa12.89□□□□□ -0.35
TGFBRAP1-202ENST00000393359 KRTAP13-2Q52LG2 175 aa12.84□□□□□ -0.35
TGFBRAP1-202ENST00000393359 Q6ZRN7 208 aaPredicted RBP12.8□□□□□ -0.36
TGFBRAP1-202ENST00000393359 FLG2Q5D862 2391 aaPredicted RBP12.78□□□□□ -0.36
TGFBRAP1-202ENST00000393359 RPS29P62273 56 aaKnown RBP12.77□□□□□ -0.36
TGFBRAP1-202ENST00000393359 HELZ2Q9BYK8 2649 aaKnown RBP12.76□□□□□ -0.37
TGFBRAP1-202ENST00000393359 CHD6Q8TD26 2715 aa12.75□□□□□ -0.37
TGFBRAP1-202ENST00000393359 NBEAL1Q6ZS30 2694 aa12.73□□□□□ -0.37
TGFBRAP1-202ENST00000393359 CFAP46Q8IYW2 2715 aa12.72□□□□□ -0.37
TGFBRAP1-202ENST00000393359 C10orf95Q9H7T3 257 aa12.71□□□□□ -0.38
TGFBRAP1-202ENST00000393359 AKAP13Q12802 2813 aa12.69□□□□□ -0.38
TGFBRAP1-202ENST00000393359 KRTAP13-1Q8IUC0 172 aa12.68□□□□□ -0.38
TGFBRAP1-202ENST00000393359 DMBT1Q9UGM3 2413 aaPredicted RBP12.68□□□□□ -0.38
TGFBRAP1-202ENST00000393359 A0A0C4DFX4 3053 aa12.67□□□□□ -0.38
TGFBRAP1-202ENST00000393359 MKI67P46013 3256 aaKnown RBP12.64□□□□□ -0.39
TGFBRAP1-202ENST00000393359 GCN1Q92616 2671 aaKnown RBP12.59□□□□□ -0.39
TGFBRAP1-202ENST00000393359 TNP1P09430 55 aa12.58□□□□□ -0.4
TGFBRAP1-202ENST00000393359 MGAQ8IWI9 3026 aa12.57□□□□□ -0.4
TGFBRAP1-202ENST00000393359 TEX15Q9BXT5 2789 aa12.56□□□□□ -0.4
TGFBRAP1-202ENST00000393359 STAB1Q9NY15 2570 aa12.54□□□□□ -0.4
TGFBRAP1-202ENST00000393359 CHD9Q3L8U1 2897 aa12.54□□□□□ -0.4
TGFBRAP1-202ENST00000393359 UNC79Q9P2D8 2635 aa12.49□□□□□ -0.41
TGFBRAP1-202ENST00000393359 CENPEQ02224 2701 aa12.46□□□□□ -0.41
TGFBRAP1-202ENST00000393359 TRIOO75962 3097 aa12.45□□□□□ -0.42
TGFBRAP1-202ENST00000393359 NBEAL2Q6ZNJ1 2754 aa12.43□□□□□ -0.42
TGFBRAP1-202ENST00000393359 HTTP42858 3142 aa12.4□□□□□ -0.43
TGFBRAP1-202ENST00000393359 LAMA2P24043 3122 aaKnown RBP12.34□□□□□ -0.43
TGFBRAP1-202ENST00000393359 LAMA3Q16787 3333 aa12.33□□□□□ -0.44
TGFBRAP1-202ENST00000393359 A0A1B0GVY2 172 aa12.32□□□□□ -0.44
TGFBRAP1-202ENST00000393359 FREM2Q5SZK8 3169 aa12.28□□□□□ -0.44
TGFBRAP1-202ENST00000393359 RANBP2P49792 3224 aaKnown RBP12.28□□□□□ -0.44
TGFBRAP1-202ENST00000393359 WDFY4Q6ZS81 3184 aa12.26□□□□□ -0.45
TGFBRAP1-202ENST00000393359 KRTAP10-8P60410 259 aa12.26□□□□□ -0.45
TGFBRAP1-202ENST00000393359 TEP1Q99973 2627 aaKnown RBP12.26□□□□□ -0.45
TGFBRAP1-202ENST00000393359 BRCA2P51587 3418 aa12.26□□□□□ -0.45
TGFBRAP1-202ENST00000393359 XIRP2A4UGR9 3374 aa12.22□□□□□ -0.45
TGFBRAP1-202ENST00000393359 NOTCH1P46531 2555 aa12.22□□□□□ -0.45
TGFBRAP1-202ENST00000393359 STAB2Q8WWQ8 2551 aa12.2□□□□□ -0.46
TGFBRAP1-202ENST00000393359 H0YAA0 97 aa12.2□□□□□ -0.46
TGFBRAP1-202ENST00000393359 CELSR3Q9NYQ7 3312 aa12.19□□□□□ -0.46
TGFBRAP1-202ENST00000393359 FRYQ5TBA9 3013 aa12.17□□□□□ -0.46
TGFBRAP1-202ENST00000393359 COL6A5A8TX70 2615 aa12.17□□□□□ -0.46
TGFBRAP1-202ENST00000393359 XP32Q5T750 250 aa12.15□□□□□ -0.46
TGFBRAP1-202ENST00000393359 UNC80Q8N2C7 3258 aa12.13□□□□□ -0.47
TGFBRAP1-202ENST00000393359 SETXQ7Z333 2677 aaKnown RBP12.12□□□□□ -0.47
TGFBRAP1-202ENST00000393359 TRANK1O15050 2925 aa12.11□□□□□ -0.47
TGFBRAP1-202ENST00000393359 PP632Q6XCG6 107 aa12.11□□□□□ -0.47
TGFBRAP1-202ENST00000393359 PRUNE2Q8WUY3 3088 aa12.07□□□□□ -0.48
TGFBRAP1-202ENST00000393359 KRTAP1-4P0C5Y4 121 aa12.06□□□□□ -0.48
TGFBRAP1-202ENST00000393359 P0C880 135 aa12.02□□□□□ -0.48
TGFBRAP1-202ENST00000393359 KALRNO60229 2985 aa12□□□□□ -0.49
TGFBRAP1-202ENST00000393359 CDH23Q9H251 3354 aa11.98□□□□□ -0.49
TGFBRAP1-202ENST00000393359 DNAH14Q0VDD8 3507 aa11.97□□□□□ -0.49
TGFBRAP1-202ENST00000393359 BAHCC1Q9P281 2608 aa11.96□□□□□ -0.49
TGFBRAP1-202ENST00000393359 ZNF292O60281 2723 aa11.95□□□□□ -0.5
TGFBRAP1-202ENST00000393359 VPS13AQ96RL7 3174 aa11.95□□□□□ -0.5
TGFBRAP1-202ENST00000393359 DSPP15924 2871 aaKnown RBP11.91□□□□□ -0.5
TGFBRAP1-202ENST00000393359 MAP1AP78559 2803 aaPredicted RBP11.9□□□□□ -0.5
TGFBRAP1-202ENST00000393359 ITPR2Q14571 2701 aa11.88□□□□□ -0.51
TGFBRAP1-202ENST00000393359 UBR5O95071 2799 aaPredicted RBP11.88□□□□□ -0.51
TGFBRAP1-202ENST00000393359 APCP25054 2843 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms