RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 FAM229AH3BQW9 127 aa10.5□□□□□ -0.73
SNX9-201ENST00000392185 CSMD1Q96PZ7 3565 aa10.49□□□□□ -0.73
SNX9-201ENST00000392185 A0A1B0GW54 56 aa10.48□□□□□ -0.73
SNX9-201ENST00000392185 hDV103S1A0JD37 113 aa10.48□□□□□ -0.73
SNX9-201ENST00000392185 K7EQZ3 153 aa10.48□□□□□ -0.73
SNX9-201ENST00000392185 TENM3Q9P273 2699 aa10.47□□□□□ -0.73
SNX9-201ENST00000392185 PDZD2O15018 2839 aa10.47□□□□□ -0.73
SNX9-201ENST00000392185 KRTAP26-1Q6PEX3 210 aa10.45□□□□□ -0.74
SNX9-201ENST00000392185 A0A1W2PNM2 257 aa10.44□□□□□ -0.74
SNX9-201ENST00000392185 C1orf64Q8NEQ6 169 aa10.44□□□□□ -0.74
SNX9-201ENST00000392185 SVEP1Q4LDE5 3571 aa10.44□□□□□ -0.74
SNX9-201ENST00000392185 IGKV2D-30A0A075B6S6 120 aa10.44□□□□□ -0.74
SNX9-201ENST00000392185 IGKV2-30P06310 120 aa10.44□□□□□ -0.74
SNX9-201ENST00000392185 VWFP04275 2813 aa10.44□□□□□ -0.74
SNX9-201ENST00000392185 IGLV5-37A0A075B6J1 123 aa10.42□□□□□ -0.74
SNX9-201ENST00000392185 IGLV7-43P04211 117 aa10.42□□□□□ -0.74
SNX9-201ENST00000392185 ATP5EP56381 51 aaPredicted RBP10.42□□□□□ -0.74
SNX9-201ENST00000392185 BRK1Q8WUW1 75 aa10.42□□□□□ -0.74
SNX9-201ENST00000392185 ZFHX3Q15911 3703 aa10.41□□□□□ -0.74
SNX9-201ENST00000392185 PKD1L1Q8TDX9 2849 aa10.4□□□□□ -0.74
SNX9-201ENST00000392185 SEC61GP60059 68 aa10.4□□□□□ -0.75
SNX9-201ENST00000392185 SPRR4Q96PI1 79 aa10.39□□□□□ -0.75
SNX9-201ENST00000392185 CUBNO60494 3623 aa10.39□□□□□ -0.75
SNX9-201ENST00000392185 DMBT1Q9UGM3 2413 aaPredicted RBP10.38□□□□□ -0.75
SNX9-201ENST00000392185 NBPF19A0A087WUL8 3843 aa10.38□□□□□ -0.75
SNX9-201ENST00000392185 SPINK1P00995 79 aa10.36□□□□□ -0.75
SNX9-201ENST00000392185 A8MWP4 228 aa10.35□□□□□ -0.75
SNX9-201ENST00000392185 LINC00313P59037 77 aa10.34□□□□□ -0.75
SNX9-201ENST00000392185 CSMD2Q7Z408 3487 aa10.33□□□□□ -0.76
SNX9-201ENST00000392185 IGLV5-48A0A075B6I7 105 aa10.33□□□□□ -0.76
SNX9-201ENST00000392185 SSBP3-AS1Q7Z2R9 100 aa10.33□□□□□ -0.76
SNX9-201ENST00000392185 SPENQ96T58 3664 aaKnown RBP10.32□□□□□ -0.76
SNX9-201ENST00000392185 SPTSSBQ8NFR3 76 aa10.32□□□□□ -0.76
SNX9-201ENST00000392185 OBSCN-AS1Q96MR7 158 aa10.32□□□□□ -0.76
SNX9-201ENST00000392185 SERP1Q9Y6X1 66 aa10.32□□□□□ -0.76
SNX9-201ENST00000392185 SMIM26A0A096LP01 95 aa10.31□□□□□ -0.76
SNX9-201ENST00000392185 TRAV22A0A0B4J277 110 aa10.31□□□□□ -0.76
SNX9-201ENST00000392185 LINC00336Q6ZUF6 198 aa10.31□□□□□ -0.76
SNX9-201ENST00000392185 PRR15Q8IV56 129 aa10.29□□□□□ -0.76
SNX9-201ENST00000392185 TP53AIP1Q9HCN2 124 aa10.29□□□□□ -0.76
SNX9-201ENST00000392185 Q96NJ1 140 aa10.28□□□□□ -0.76
SNX9-201ENST00000392185 DSCR10P59022 87 aa10.26□□□□□ -0.77
SNX9-201ENST00000392185 SPRR1AP35321 89 aa10.26□□□□□ -0.77
SNX9-201ENST00000392185 LINC00304Q8N9R0 145 aa10.26□□□□□ -0.77
SNX9-201ENST00000392185 LINC01600Q96MT4 127 aa10.25□□□□□ -0.77
SNX9-201ENST00000392185 MRPL34Q9BQ48 92 aaKnown RBP10.24□□□□□ -0.77
SNX9-201ENST00000392185 A6NED7 52 aa10.24□□□□□ -0.77
SNX9-201ENST00000392185 C8orf17Q9NRJ1 99 aa10.23□□□□□ -0.77
SNX9-201ENST00000392185 PANO1I0J062 215 aa10.23□□□□□ -0.77
SNX9-201ENST00000392185 PSPHP1O15172 72 aa10.22□□□□□ -0.77
SNX9-201ENST00000392185 A0A0U1RQV1 116 aa10.22□□□□□ -0.77
SNX9-201ENST00000392185 V9GYY9 64 aa10.22□□□□□ -0.77
SNX9-201ENST00000392185 A0A1B0GVX0 72 aa10.2□□□□□ -0.78
SNX9-201ENST00000392185 KRTAP10-2P60368 255 aa10.2□□□□□ -0.78
SNX9-201ENST00000392185 PLAC8Q9NZF1 115 aa10.19□□□□□ -0.78
SNX9-201ENST00000392185 PRR15LQ9BU68 103 aa10.19□□□□□ -0.78
SNX9-201ENST00000392185 C9orf92A6NGG3 77 aa10.18□□□□□ -0.78
SNX9-201ENST00000392185 FLG2Q5D862 2391 aaPredicted RBP10.17□□□□□ -0.78
SNX9-201ENST00000392185 C8orf87E5RJ46 101 aa10.15□□□□□ -0.79
SNX9-201ENST00000392185 PRR26Q8N8Z3 221 aa10.14□□□□□ -0.79
SNX9-201ENST00000392185 C7orf65Q6ZTY9 151 aa10.13□□□□□ -0.79
SNX9-201ENST00000392185 KRTAP10-1P60331 282 aa10.13□□□□□ -0.79
SNX9-201ENST00000392185 TENM2Q9NT68 2774 aa10.13□□□□□ -0.79
SNX9-201ENST00000392185 Q6ZR54 194 aa10.12□□□□□ -0.79
SNX9-201ENST00000392185 H3BPC8 53 aa10.1□□□□□ -0.79
SNX9-201ENST00000392185 SPAG11AQ6PDA7 123 aa10.1□□□□□ -0.79
SNX9-201ENST00000392185 J3QL48 77 aa10.1□□□□□ -0.79
SNX9-201ENST00000392185 TGP01266 2768 aa10.09□□□□□ -0.79
SNX9-201ENST00000392185 KLKP1Q107X0 134 aa10.06□□□□□ -0.8
SNX9-201ENST00000392185 LOC101927531A0A1B0GV80 90 aa10.05□□□□□ -0.8
SNX9-201ENST00000392185 BSNQ9UPA5 3926 aa10.05□□□□□ -0.8
SNX9-201ENST00000392185 LCE6AA0A183 80 aa10.04□□□□□ -0.8
SNX9-201ENST00000392185 ATP11AUNQ6ZP68 121 aa10.04□□□□□ -0.8
SNX9-201ENST00000392185 KRTAP4-16G5E9R7 235 aaPredicted RBP10.04□□□□□ -0.8
SNX9-201ENST00000392185 ACYP2P14621 99 aa10.04□□□□□ -0.8
SNX9-201ENST00000392185 Q6ZRN7 208 aaPredicted RBP10.02□□□□□ -0.8
SNX9-201ENST00000392185 H7BZZ5 65 aa10.02□□□□□ -0.81
SNX9-201ENST00000392185 KRTAP11-1Q8IUC1 163 aa10.01□□□□□ -0.81
SNX9-201ENST00000392185 SPRR1BP22528 89 aa10□□□□□ -0.81
SNX9-201ENST00000392185 KRTAP7-1Q8IUC3 87 aa9.99□□□□□ -0.81
SNX9-201ENST00000392185 SVIPQ8NHG7 77 aa9.99□□□□□ -0.81
SNX9-201ENST00000392185 OCR1Q9BZK8 76 aa9.97□□□□□ -0.81
SNX9-201ENST00000392185 K7ERS5 55 aa9.97□□□□□ -0.81
SNX9-201ENST00000392185 C4orf26Q17RF5 130 aa9.96□□□□□ -0.81
SNX9-201ENST00000392185 RPS28P62857 69 aaKnown RBP9.96□□□□□ -0.82
SNX9-201ENST00000392185 IGLV8-61A0A075B6I0 122 aa9.93□□□□□ -0.82
SNX9-201ENST00000392185 FAM229BQ4G0N7 80 aa9.92□□□□□ -0.82
SNX9-201ENST00000392185 CD164Q04900 197 aa9.92□□□□□ -0.82
SNX9-201ENST00000392185 COA5Q86WW8 74 aa9.91□□□□□ -0.82
SNX9-201ENST00000392185 A0A1B0GU69 56 aa9.9□□□□□ -0.82
SNX9-201ENST00000392185 LINC00472Q9H8W2 130 aa9.9□□□□□ -0.82
SNX9-201ENST00000392185 MMP24-AS1A0A0U1RRL7 71 aa9.87□□□□□ -0.83
SNX9-201ENST00000392185 PMAIP1Q13794 54 aa9.86□□□□□ -0.83
SNX9-201ENST00000392185 Q8N1X5 172 aa9.84□□□□□ -0.83
SNX9-201ENST00000392185 A0A087X002 238 aa9.83□□□□□ -0.84
SNX9-201ENST00000392185 A8MUN3 132 aa9.83□□□□□ -0.84
SNX9-201ENST00000392185 CYSTM1Q9H1C7 97 aa9.82□□□□□ -0.84
SNX9-201ENST00000392185 TRRAPQ9Y4A5 3859 aa9.8□□□□□ -0.84
SNX9-201ENST00000392185 SRRM2Q9UQ35 2752 aaKnown RBP9.8□□□□□ -0.84
SNX9-201ENST00000392185 Q5VSD8 79 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms