RNA–Protein interactions for RNA: ENST00000389428.7

SEMA6D-206, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 5,874 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-206ENST00000389428 F8P00451 2351 aa6.72□□□□□ -1.33
SEMA6D-206ENST00000389428 DOPEY1Q5JWR5 2465 aa6.7□□□□□ -1.34
SEMA6D-206ENST00000389428 JMJD1CQ15652 2540 aa6.69□□□□□ -1.34
SEMA6D-206ENST00000389428 NDUFAF8A1L188 74 aa6.68□□□□□ -1.34
SEMA6D-206ENST00000389428 MYO18BQ8IUG5 2567 aa6.68□□□□□ -1.34
SEMA6D-206ENST00000389428 ZNF462Q96JM2 2506 aa6.67□□□□□ -1.34
SEMA6D-206ENST00000389428 TLN1Q9Y490 2541 aaKnown RBP6.65□□□□□ -1.34
SEMA6D-206ENST00000389428 Q6ZRN7 208 aaPredicted RBP6.64□□□□□ -1.35
SEMA6D-206ENST00000389428 PP632Q6XCG6 107 aa6.64□□□□□ -1.35
SEMA6D-206ENST00000389428 KRTAP13-2Q52LG2 175 aa6.63□□□□□ -1.35
SEMA6D-206ENST00000389428 KRTAP11-1Q8IUC1 163 aa6.62□□□□□ -1.35
SEMA6D-206ENST00000389428 KRTAP13-1Q8IUC0 172 aa6.59□□□□□ -1.36
SEMA6D-206ENST00000389428 TLN2Q9Y4G6 2542 aa6.58□□□□□ -1.36
SEMA6D-206ENST00000389428 WDR87Q6ZQQ6 2873 aa6.57□□□□□ -1.36
SEMA6D-206ENST00000389428 USP9XQ93008 2570 aaPredicted RBP6.54□□□□□ -1.36
SEMA6D-206ENST00000389428 ZFYVE26Q68DK2 2539 aa6.53□□□□□ -1.36
SEMA6D-206ENST00000389428 CEP295Q9C0D2 2601 aa6.53□□□□□ -1.36
SEMA6D-206ENST00000389428 KRTAP7-1Q8IUC3 87 aa6.52□□□□□ -1.37
SEMA6D-206ENST00000389428 CENPFP49454 3210 aa6.51□□□□□ -1.37
SEMA6D-206ENST00000389428 KRTAP10-8P60410 259 aa6.51□□□□□ -1.37
SEMA6D-206ENST00000389428 DNAH12Q6ZR08 3092 aa6.5□□□□□ -1.37
SEMA6D-206ENST00000389428 BPTFQ12830 3046 aa6.49□□□□□ -1.37
SEMA6D-206ENST00000389428 CHD8Q9HCK8 2581 aa6.48□□□□□ -1.37
SEMA6D-206ENST00000389428 ANKRD11Q6UB99 2663 aaPredicted RBP6.48□□□□□ -1.37
SEMA6D-206ENST00000389428 ACANP16112 2415 aa6.46□□□□□ -1.38
SEMA6D-206ENST00000389428 PRO2289Q9P1D8 64 aa6.43□□□□□ -1.38
SEMA6D-206ENST00000389428 UTRNP46939 3433 aa6.43□□□□□ -1.38
SEMA6D-206ENST00000389428 SPTBN4Q9H254 2564 aa6.43□□□□□ -1.38
SEMA6D-206ENST00000389428 PKD1L2Q7Z442 2459 aa6.42□□□□□ -1.38
SEMA6D-206ENST00000389428 KRTAP21-3Q3LHN1 58 aa6.41□□□□□ -1.38
SEMA6D-206ENST00000389428 FASNP49327 2511 aaKnown RBP6.39□□□□□ -1.39
SEMA6D-206ENST00000389428 A0A1B0GVY2 172 aa6.39□□□□□ -1.39
SEMA6D-206ENST00000389428 XP32Q5T750 250 aa6.39□□□□□ -1.39
SEMA6D-206ENST00000389428 CEP350Q5VT06 3117 aa6.36□□□□□ -1.39
SEMA6D-206ENST00000389428 P0C880 135 aa6.33□□□□□ -1.4
SEMA6D-206ENST00000389428 MTORP42345 2549 aa6.31□□□□□ -1.4
SEMA6D-206ENST00000389428 USP9YO00507 2555 aaPredicted RBP6.31□□□□□ -1.4
SEMA6D-206ENST00000389428 POLQO75417 2590 aa6.31□□□□□ -1.4
SEMA6D-206ENST00000389428 TPRXLQ17RH7 258 aa6.31□□□□□ -1.4
SEMA6D-206ENST00000389428 KRTAP10-10P60014 251 aa6.3□□□□□ -1.4
SEMA6D-206ENST00000389428 C5orf42Q9H799 3197 aa6.3□□□□□ -1.4
SEMA6D-206ENST00000389428 HTTP42858 3142 aa6.27□□□□□ -1.41
SEMA6D-206ENST00000389428 H0YAA0 97 aa6.26□□□□□ -1.41
SEMA6D-206ENST00000389428 CHD7Q9P2D1 2997 aa6.26□□□□□ -1.41
SEMA6D-206ENST00000389428 SETD2Q9BYW2 2564 aaPredicted RBP6.25□□□□□ -1.41
SEMA6D-206ENST00000389428 CHD9Q3L8U1 2897 aa6.23□□□□□ -1.41
SEMA6D-206ENST00000389428 KRTAP1-4P0C5Y4 121 aa6.23□□□□□ -1.41
SEMA6D-206ENST00000389428 EPG5Q9HCE0 2579 aa6.23□□□□□ -1.41
SEMA6D-206ENST00000389428 PCNTO95613 3336 aa6.17□□□□□ -1.42
SEMA6D-206ENST00000389428 TRANK1O15050 2925 aa6.16□□□□□ -1.42
SEMA6D-206ENST00000389428 RANBP2P49792 3224 aaKnown RBP6.14□□□□□ -1.43
SEMA6D-206ENST00000389428 KRTAP13-3Q3SY46 172 aa6.11□□□□□ -1.43
SEMA6D-206ENST00000389428 PRRC2CQ9Y520 2896 aaKnown RBP6.1□□□□□ -1.43
SEMA6D-206ENST00000389428 FLNAP21333 2647 aaKnown RBP6.04□□□□□ -1.44
SEMA6D-206ENST00000389428 MKI67P46013 3256 aaKnown RBP6.04□□□□□ -1.44
SEMA6D-206ENST00000389428 ZNF292O60281 2723 aa6.01□□□□□ -1.45
SEMA6D-206ENST00000389428 HECTD1Q9ULT8 2610 aa6□□□□□ -1.45
SEMA6D-206ENST00000389428 LAMA3Q16787 3333 aa5.99□□□□□ -1.45
SEMA6D-206ENST00000389428 MGAM2Q2M2H8 2515 aa5.98□□□□□ -1.45
SEMA6D-206ENST00000389428 DMBT1Q9UGM3 2413 aaPredicted RBP5.98□□□□□ -1.45
SEMA6D-206ENST00000389428 FLNBO75369 2602 aaKnown RBP5.97□□□□□ -1.45
SEMA6D-206ENST00000389428 KRTAP13-4Q3LI77 160 aa5.96□□□□□ -1.45
SEMA6D-206ENST00000389428 ITPR3Q14573 2671 aa5.96□□□□□ -1.45
SEMA6D-206ENST00000389428 KRTAP12-2P59991 146 aa5.94□□□□□ -1.46
SEMA6D-206ENST00000389428 A0A0C4DFX4 3053 aa5.94□□□□□ -1.46
SEMA6D-206ENST00000389428 BRCA2P51587 3418 aa5.92□□□□□ -1.46
SEMA6D-206ENST00000389428 FLG2Q5D862 2391 aaPredicted RBP5.9□□□□□ -1.47
SEMA6D-206ENST00000389428 DNAH14Q0VDD8 3507 aa5.88□□□□□ -1.47
SEMA6D-206ENST00000389428 CFAP54Q96N23 3096 aa5.87□□□□□ -1.47
SEMA6D-206ENST00000389428 USP24Q9UPU5 2620 aa5.87□□□□□ -1.47
SEMA6D-206ENST00000389428 KRTAP15-1Q3LI76 137 aa5.84□□□□□ -1.47
SEMA6D-206ENST00000389428 HELZ2Q9BYK8 2649 aaKnown RBP5.84□□□□□ -1.47
SEMA6D-206ENST00000389428 ATRQ13535 2644 aa5.84□□□□□ -1.47
SEMA6D-206ENST00000389428 PRUNE2Q8WUY3 3088 aa5.83□□□□□ -1.48
SEMA6D-206ENST00000389428 XIRP2A4UGR9 3374 aa5.81□□□□□ -1.48
SEMA6D-206ENST00000389428 LAMA2P24043 3122 aaKnown RBP5.8□□□□□ -1.48
SEMA6D-206ENST00000389428 TRIOO75962 3097 aa5.8□□□□□ -1.48
SEMA6D-206ENST00000389428 CDH23Q9H251 3354 aa5.8□□□□□ -1.48
SEMA6D-206ENST00000389428 CENPEQ02224 2701 aa5.8□□□□□ -1.48
SEMA6D-206ENST00000389428 CFAP46Q8IYW2 2715 aa5.78□□□□□ -1.48
SEMA6D-206ENST00000389428 MGAQ8IWI9 3026 aa5.78□□□□□ -1.48
SEMA6D-206ENST00000389428 KRTAP12-1P59990 96 aa5.77□□□□□ -1.49
SEMA6D-206ENST00000389428 MAST4O15021 2626 aa5.76□□□□□ -1.49
SEMA6D-206ENST00000389428 UNC80Q8N2C7 3258 aa5.75□□□□□ -1.49
SEMA6D-206ENST00000389428 CELSR3Q9NYQ7 3312 aa5.74□□□□□ -1.49
SEMA6D-206ENST00000389428 NBEAL1Q6ZS30 2694 aa5.73□□□□□ -1.49
SEMA6D-206ENST00000389428 AKAP13Q12802 2813 aa5.73□□□□□ -1.49
SEMA6D-206ENST00000389428 WDFY4Q6ZS81 3184 aa5.71□□□□□ -1.5
SEMA6D-206ENST00000389428 DSPP15924 2871 aaKnown RBP5.71□□□□□ -1.5
SEMA6D-206ENST00000389428 SZT2Q5T011 3432 aa5.71□□□□□ -1.5
SEMA6D-206ENST00000389428 IGSF10Q6WRI0 2623 aa5.7□□□□□ -1.5
SEMA6D-206ENST00000389428 KMT2BQ9UMN6 2715 aaPredicted RBP5.68□□□□□ -1.5
SEMA6D-206ENST00000389428 INE1O15225 51 aa5.66□□□□□ -1.5
SEMA6D-206ENST00000389428 UNC79Q9P2D8 2635 aa5.64□□□□□ -1.51
SEMA6D-206ENST00000389428 STAB1Q9NY15 2570 aa5.63□□□□□ -1.51
SEMA6D-206ENST00000389428 TNRC18O15417 2968 aaPredicted RBP5.63□□□□□ -1.51
SEMA6D-206ENST00000389428 COL6A3P12111 3177 aa5.62□□□□□ -1.51
SEMA6D-206ENST00000389428 SPTBN5Q9NRC6 3674 aaKnown RBP5.61□□□□□ -1.51
SEMA6D-206ENST00000389428 VCANP13611 3396 aa5.61□□□□□ -1.51
SEMA6D-206ENST00000389428 VPS13AQ96RL7 3174 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms