RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 A0A1W2PNM2 257 aa11.91□□□□□ -0.5
GMDS-201ENST00000380805 ATOX1O00244 68 aa11.91□□□□□ -0.5
GMDS-201ENST00000380805 Q8NBF4 154 aa11.91□□□□□ -0.5
GMDS-201ENST00000380805 FUSP35637 526 aaKnown RBP eCLIP11.91□□□□□ -0.53e-6■■■□□ 19.1
GMDS-201ENST00000380805 SPRR4Q96PI1 79 aa11.91□□□□□ -0.5
GMDS-201ENST00000380805 HECTD4Q9Y4D8 3996 aa11.9□□□□□ -0.5
GMDS-201ENST00000380805 HAMPP81172 84 aa11.89□□□□□ -0.51
GMDS-201ENST00000380805 PLAC8Q9NZF1 115 aa11.89□□□□□ -0.51
GMDS-201ENST00000380805 RYR3Q15413 4870 aa11.89□□□□□ -0.51
GMDS-201ENST00000380805 FRAS1Q86XX4 4008 aa11.88□□□□□ -0.51
GMDS-201ENST00000380805 F8WEM9 126 aa11.88□□□□□ -0.51
GMDS-201ENST00000380805 UBE2AP49459 152 aa11.88□□□□□ -0.51
GMDS-201ENST00000380805 IGLV5-52A0A0A0MRZ9 124 aa11.87□□□□□ -0.51
GMDS-201ENST00000380805 DPH3Q96FX2 82 aa11.87□□□□□ -0.51
GMDS-201ENST00000380805 CCDC179H3BU77 68 aa11.85□□□□□ -0.51
GMDS-201ENST00000380805 CRYGAP11844 174 aa11.84□□□□□ -0.51
GMDS-201ENST00000380805 NREPQ16612 68 aa11.84□□□□□ -0.51
GMDS-201ENST00000380805 IGFL1Q6UW32 110 aa11.82□□□□□ -0.52
GMDS-201ENST00000380805 DNAH8Q96JB1 4490 aa11.8□□□□□ -0.52
GMDS-201ENST00000380805 UQCRQO14949 82 aa11.8□□□□□ -0.52
GMDS-201ENST00000380805 COX7CP15954 63 aa11.79□□□□□ -0.52
GMDS-201ENST00000380805 FAT2Q9NYQ8 4349 aa11.79□□□□□ -0.52
GMDS-201ENST00000380805 DNAH11Q96DT5 4516 aa11.77□□□□□ -0.53
GMDS-201ENST00000380805 SCXQ7RTU7 201 aa11.77□□□□□ -0.53
GMDS-201ENST00000380805 SERP2Q8N6R1 65 aa11.76□□□□□ -0.53
GMDS-201ENST00000380805 PSORS1C2Q9UIG4 136 aa11.76□□□□□ -0.53
GMDS-201ENST00000380805 BPY2O14599 106 aa11.75□□□□□ -0.53
GMDS-201ENST00000380805 DNAH5Q8TE73 4624 aa11.75□□□□□ -0.53
GMDS-201ENST00000380805 LINC00483Q53H64 154 aa11.74□□□□□ -0.53
GMDS-201ENST00000380805 IGKV4-1P06312 121 aa11.73□□□□□ -0.53
GMDS-201ENST00000380805 KRTAP10-2P60368 255 aa11.72□□□□□ -0.53
GMDS-201ENST00000380805 A0A0G2JQZ4 141 aa11.69□□□□□ -0.54
GMDS-201ENST00000380805 ZNF706Q9Y5V0 76 aaPredicted RBP11.69□□□□□ -0.54
GMDS-201ENST00000380805 ZNF861PO60384 105 aa11.69□□□□□ -0.54
GMDS-201ENST00000380805 SMIM20Q8N5G0 67 aa11.68□□□□□ -0.54
GMDS-201ENST00000380805 PKD1P98161 4303 aa11.67□□□□□ -0.54
GMDS-201ENST00000380805 C9orf153Q5TBE3 101 aa11.67□□□□□ -0.54
GMDS-201ENST00000380805 Q6ZSA8 131 aa11.67□□□□□ -0.54
GMDS-201ENST00000380805 RPL37AP61513 92 aaKnown RBP11.66□□□□□ -0.54
GMDS-201ENST00000380805 Q8N9L7 120 aa11.66□□□□□ -0.54
GMDS-201ENST00000380805 A0A087WSZ3 146 aa11.64□□□□□ -0.55
GMDS-201ENST00000380805 DSCR10P59022 87 aa11.64□□□□□ -0.55
GMDS-201ENST00000380805 SRRM2Q9UQ35 2752 aaKnown RBP11.64□□□□□ -0.55
GMDS-201ENST00000380805 TRAV7A0A075B6U4 112 aa11.63□□□□□ -0.55
GMDS-201ENST00000380805 FAM30AQ9NZY2 134 aa11.63□□□□□ -0.55
GMDS-201ENST00000380805 CIRBP-AS1Q8TBR5 109 aa11.63□□□□□ -0.55
GMDS-201ENST00000380805 IGLV7-43P04211 117 aa11.61□□□□□ -0.55
GMDS-201ENST00000380805 LINC00336Q6ZUF6 198 aa11.6□□□□□ -0.55
GMDS-201ENST00000380805 KRTAP10-1P60331 282 aa11.57□□□□□ -0.56
GMDS-201ENST00000380805 PKHD1P08F94 4074 aa11.57□□□□□ -0.56
GMDS-201ENST00000380805 A0A1B0GVY2 172 aa11.55□□□□□ -0.56
GMDS-201ENST00000380805 K7EQZ3 153 aa11.55□□□□□ -0.56
GMDS-201ENST00000380805 LINC00472Q9H8W2 130 aa11.55□□□□□ -0.56
GMDS-201ENST00000380805 IGLV9-49A0A0B4J1Y8 123 aa11.54□□□□□ -0.56
GMDS-201ENST00000380805 OCR1Q9BZK8 76 aa11.52□□□□□ -0.57
GMDS-201ENST00000380805 CYSTM1Q9H1C7 97 aa11.51□□□□□ -0.57
GMDS-201ENST00000380805 SS18L2Q9UHA2 77 aa11.51□□□□□ -0.57
GMDS-201ENST00000380805 KLKP1Q107X0 134 aa11.47□□□□□ -0.57
GMDS-201ENST00000380805 MOBPQ13875 183 aa11.47□□□□□ -0.57
GMDS-201ENST00000380805 C20orf197Q8N268 126 aa11.46□□□□□ -0.57
GMDS-201ENST00000380805 EPPK1P58107 5090 aaKnown RBP11.46□□□□□ -0.57
GMDS-201ENST00000380805 HCG22E2RYF7 251 aa11.46□□□□□ -0.58
GMDS-201ENST00000380805 J3KT08 172 aa11.46□□□□□ -0.58
GMDS-201ENST00000380805 DEFB116Q30KQ4 102 aa11.46□□□□□ -0.58
GMDS-201ENST00000380805 LRP1BQ9NZR2 4599 aa11.45□□□□□ -0.58
GMDS-201ENST00000380805 ANAPC11Q9NYG5 84 aa11.45□□□□□ -0.58
GMDS-201ENST00000380805 A8MWP4 228 aa11.44□□□□□ -0.58
GMDS-201ENST00000380805 DYNC1H1Q14204 4646 aaKnown RBP11.44□□□□□ -0.58
GMDS-201ENST00000380805 Q96NJ1 140 aa11.43□□□□□ -0.58
GMDS-201ENST00000380805 PRR15Q8IV56 129 aa11.43□□□□□ -0.58
GMDS-201ENST00000380805 TMEM258P61165 79 aa11.42□□□□□ -0.58
GMDS-201ENST00000380805 KRTAP29-1A8MX34 341 aaPredicted RBP11.39□□□□□ -0.59
GMDS-201ENST00000380805 CD164Q04900 197 aa11.38□□□□□ -0.59
GMDS-201ENST00000380805 SSBP3-AS1Q7Z2R9 100 aa11.38□□□□□ -0.59
GMDS-201ENST00000380805 TMEM254Q8TBM7 123 aa11.36□□□□□ -0.59
GMDS-201ENST00000380805 FAM229BQ4G0N7 80 aa11.35□□□□□ -0.59
GMDS-201ENST00000380805 H7BZZ5 65 aa11.35□□□□□ -0.59
GMDS-201ENST00000380805 HRCT1Q6UXD1 115 aa11.34□□□□□ -0.59
GMDS-201ENST00000380805 A0A0U1RQV1 116 aa11.32□□□□□ -0.6
GMDS-201ENST00000380805 NDUFC1O43677 76 aa11.32□□□□□ -0.6
GMDS-201ENST00000380805 SNURFQ9Y675 71 aa11.32□□□□□ -0.6
GMDS-201ENST00000380805 NDUFB1O75438 58 aa11.31□□□□□ -0.6
GMDS-201ENST00000380805 WFDC13Q8IUB5 93 aa11.3□□□□□ -0.6
GMDS-201ENST00000380805 CASC2Q6XLA1 102 aa11.29□□□□□ -0.6
GMDS-201ENST00000380805 APOBP04114 4563 aaKnown RBP11.29□□□□□ -0.6
GMDS-201ENST00000380805 MMP24-AS1A0A0U1RRL7 71 aa11.29□□□□□ -0.6
GMDS-201ENST00000380805 KRTAP1-4P0C5Y4 121 aa11.29□□□□□ -0.6
GMDS-201ENST00000380805 A0A087X002 238 aa11.28□□□□□ -0.6
GMDS-201ENST00000380805 ASB16-AS1Q495Z4 193 aa11.28□□□□□ -0.6
GMDS-201ENST00000380805 KRTAP13-2Q52LG2 175 aa11.27□□□□□ -0.61
GMDS-201ENST00000380805 C5orf47Q569G3 176 aa11.26□□□□□ -0.61
GMDS-201ENST00000380805 VPS13BQ7Z7G8 4022 aa11.25□□□□□ -0.61
GMDS-201ENST00000380805 A0A1B0GVX0 72 aa11.23□□□□□ -0.61
GMDS-201ENST00000380805 RPS28P62857 69 aaKnown RBP11.23□□□□□ -0.61
GMDS-201ENST00000380805 Q5XG85 94 aa11.23□□□□□ -0.61
GMDS-201ENST00000380805 ZCCHC13Q8WW36 166 aaKnown RBP11.22□□□□□ -0.61
GMDS-201ENST00000380805 FAM236DA0A1B0GTK5 79 aa11.21□□□□□ -0.62
GMDS-201ENST00000380805 FAM236CP0DP71 79 aa11.21□□□□□ -0.62
GMDS-201ENST00000380805 C8orf17Q9NRJ1 99 aa11.21□□□□□ -0.62
GMDS-201ENST00000380805 hDV103S1A0JD37 113 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms