RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 KRTAP10-2P60368 255 aa4.27□□□□□ -1.73
CCDC171-201ENST00000380701 PLAC4Q8WY50 150 aa4.27□□□□□ -1.73
CCDC171-201ENST00000380701 Q8N9P0 234 aaPredicted RBP4.26□□□□□ -1.73
CCDC171-201ENST00000380701 CR1P17927 2039 aa4.26□□□□□ -1.73
CCDC171-201ENST00000380701 Q5XG85 94 aa4.25□□□□□ -1.73
CCDC171-201ENST00000380701 RPL37P61927 97 aaKnown RBP4.24□□□□□ -1.73
CCDC171-201ENST00000380701 KRTAP4-16G5E9R7 235 aaPredicted RBP4.23□□□□□ -1.73
CCDC171-201ENST00000380701 Q8NDZ9 215 aa4.21□□□□□ -1.74
CCDC171-201ENST00000380701 CFAP46Q8IYW2 2715 aa4.21□□□□□ -1.74
CCDC171-201ENST00000380701 M0QZ58 72 aa4.2□□□□□ -1.74
CCDC171-201ENST00000380701 H1FX-AS1Q4G0G2 97 aa4.2□□□□□ -1.74
CCDC171-201ENST00000380701 Q6ZRN7 208 aaPredicted RBP4.19□□□□□ -1.74
CCDC171-201ENST00000380701 PANO1I0J062 215 aa4.17□□□□□ -1.74
CCDC171-201ENST00000380701 A0A0A0MQY5 61 aa4.17□□□□□ -1.74
CCDC171-201ENST00000380701 ROMO1P60602 79 aa4.16□□□□□ -1.74
CCDC171-201ENST00000380701 UNC79Q9P2D8 2635 aa4.16□□□□□ -1.74
CCDC171-201ENST00000380701 EP400Q96L91 3159 aa4.15□□□□□ -1.74
CCDC171-201ENST00000380701 KRTAP29-1A8MX34 341 aaPredicted RBP4.15□□□□□ -1.75
CCDC171-201ENST00000380701 TEP1Q99973 2627 aaKnown RBP4.15□□□□□ -1.75
CCDC171-201ENST00000380701 SETXQ7Z333 2677 aaKnown RBP4.14□□□□□ -1.75
CCDC171-201ENST00000380701 COL6A5A8TX70 2615 aa4.13□□□□□ -1.75
CCDC171-201ENST00000380701 A0A087X002 238 aa4.13□□□□□ -1.75
CCDC171-201ENST00000380701 ADM2Q7Z4H4 148 aa4.12□□□□□ -1.75
CCDC171-201ENST00000380701 BAHCC1Q9P281 2608 aa4.11□□□□□ -1.75
CCDC171-201ENST00000380701 Q5VV11 94 aa4.1□□□□□ -1.75
CCDC171-201ENST00000380701 KRTAP13-1Q8IUC0 172 aa4.09□□□□□ -1.75
CCDC171-201ENST00000380701 FLG2Q5D862 2391 aaPredicted RBP4.08□□□□□ -1.76
CCDC171-201ENST00000380701 NBEAL1Q6ZS30 2694 aa4.07□□□□□ -1.76
CCDC171-201ENST00000380701 CENPFP49454 3210 aa4.06□□□□□ -1.76
CCDC171-201ENST00000380701 A8MUU9 505 aa4.04□□□□□ -1.76
CCDC171-201ENST00000380701 C20orf166-AS1Q96NR2 134 aa4.04□□□□□ -1.76
CCDC171-201ENST00000380701 NSD1Q96L73 2696 aaPredicted RBP4.04□□□□□ -1.76
CCDC171-201ENST00000380701 KRTAP13-2Q52LG2 175 aa4.04□□□□□ -1.76
CCDC171-201ENST00000380701 ZNF292O60281 2723 aa4.04□□□□□ -1.76
CCDC171-201ENST00000380701 TEX15Q9BXT5 2789 aa4.04□□□□□ -1.76
CCDC171-201ENST00000380701 NOTCH2NLQ7Z3S9 236 aa4.04□□□□□ -1.76
CCDC171-201ENST00000380701 SPATA8Q6RVD6 105 aa4.03□□□□□ -1.76
CCDC171-201ENST00000380701 BPTFQ12830 3046 aa4.02□□□□□ -1.77
CCDC171-201ENST00000380701 DMBT1Q9UGM3 2413 aaPredicted RBP4.01□□□□□ -1.77
CCDC171-201ENST00000380701 KMT2BQ9UMN6 2715 aaPredicted RBP4□□□□□ -1.77
CCDC171-201ENST00000380701 MAP1AP78559 2803 aaPredicted RBP4□□□□□ -1.77
CCDC171-201ENST00000380701 NOTCH1P46531 2555 aa3.99□□□□□ -1.77
CCDC171-201ENST00000380701 TNP1P09430 55 aa3.98□□□□□ -1.77
CCDC171-201ENST00000380701 TPRXLQ17RH7 258 aa3.97□□□□□ -1.77
CCDC171-201ENST00000380701 CENPEQ02224 2701 aa3.97□□□□□ -1.77
CCDC171-201ENST00000380701 KRTAP7-1Q8IUC3 87 aa3.96□□□□□ -1.77
CCDC171-201ENST00000380701 KRTAP11-1Q8IUC1 163 aa3.96□□□□□ -1.78
CCDC171-201ENST00000380701 IGSF10Q6WRI0 2623 aa3.96□□□□□ -1.78
CCDC171-201ENST00000380701 PP632Q6XCG6 107 aa3.95□□□□□ -1.78
CCDC171-201ENST00000380701 PRAC1Q96KF2 57 aa3.93□□□□□ -1.78
CCDC171-201ENST00000380701 GCN1Q92616 2671 aaKnown RBP3.93□□□□□ -1.78
CCDC171-201ENST00000380701 STAB2Q8WWQ8 2551 aa3.93□□□□□ -1.78
CCDC171-201ENST00000380701 PRRC2CQ9Y520 2896 aaKnown RBP3.93□□□□□ -1.78
CCDC171-201ENST00000380701 CHD6Q8TD26 2715 aa3.92□□□□□ -1.78
CCDC171-201ENST00000380701 CYSTM1Q9H1C7 97 aa3.91□□□□□ -1.78
CCDC171-201ENST00000380701 AKAP13Q12802 2813 aa3.9□□□□□ -1.78
CCDC171-201ENST00000380701 PRO2289Q9P1D8 64 aa3.89□□□□□ -1.79
CCDC171-201ENST00000380701 XP32Q5T750 250 aa3.89□□□□□ -1.79
CCDC171-201ENST00000380701 ITPR2Q14571 2701 aa3.88□□□□□ -1.79
CCDC171-201ENST00000380701 KRTAP1-4P0C5Y4 121 aa3.88□□□□□ -1.79
CCDC171-201ENST00000380701 KRTAP25-1Q3LHN0 102 aa3.86□□□□□ -1.79
CCDC171-201ENST00000380701 UBR5O95071 2799 aaPredicted RBP3.85□□□□□ -1.79
CCDC171-201ENST00000380701 A6NN06 94 aa3.79□□□□□ -1.8
CCDC171-201ENST00000380701 A8MU10 97 aa3.79□□□□□ -1.8
CCDC171-201ENST00000380701 KRTAP13-3Q3SY46 172 aa3.79□□□□□ -1.8
CCDC171-201ENST00000380701 KRTAP10-8P60410 259 aa3.78□□□□□ -1.8
CCDC171-201ENST00000380701 TENM4Q6N022 2769 aa3.78□□□□□ -1.8
CCDC171-201ENST00000380701 CHD9Q3L8U1 2897 aa3.77□□□□□ -1.81
CCDC171-201ENST00000380701 KRTAP10-10P60014 251 aa3.77□□□□□ -1.81
CCDC171-201ENST00000380701 HIVEP1P15822 2718 aa3.76□□□□□ -1.81
CCDC171-201ENST00000380701 A0A1B0GVY2 172 aa3.75□□□□□ -1.81
CCDC171-201ENST00000380701 KRTAP16-1A8MUX0 517 aa3.75□□□□□ -1.81
CCDC171-201ENST00000380701 H3BS24 57 aa3.74□□□□□ -1.81
CCDC171-201ENST00000380701 ITPR1Q14643 2758 aa3.73□□□□□ -1.81
CCDC171-201ENST00000380701 NIPBLQ6KC79 2804 aaeCLIP3.72□□□□□ -1.81
CCDC171-201ENST00000380701 TRANK1O15050 2925 aa3.7□□□□□ -1.82
CCDC171-201ENST00000380701 CHD7Q9P2D1 2997 aa3.7□□□□□ -1.82
CCDC171-201ENST00000380701 NBEAL2Q6ZNJ1 2754 aa3.7□□□□□ -1.82
CCDC171-201ENST00000380701 C10orf95Q9H7T3 257 aa3.69□□□□□ -1.82
CCDC171-201ENST00000380701 UTRNP46939 3433 aa3.68□□□□□ -1.82
CCDC171-201ENST00000380701 DSPP15924 2871 aaKnown RBP3.67□□□□□ -1.82
CCDC171-201ENST00000380701 H0YAA0 97 aa3.66□□□□□ -1.82
CCDC171-201ENST00000380701 MGAQ8IWI9 3026 aa3.66□□□□□ -1.82
CCDC171-201ENST00000380701 FLNCQ14315 2725 aa3.64□□□□□ -1.83
CCDC171-201ENST00000380701 P0C880 135 aa3.62□□□□□ -1.83
CCDC171-201ENST00000380701 NDUFAF8A1L188 74 aa3.6□□□□□ -1.83
CCDC171-201ENST00000380701 GOLGB1Q14789 3259 aaKnown RBP3.59□□□□□ -1.83
CCDC171-201ENST00000380701 SRCAPQ6ZRS2 3230 aa3.58□□□□□ -1.84
CCDC171-201ENST00000380701 APCP25054 2843 aa3.58□□□□□ -1.84
CCDC171-201ENST00000380701 CEP350Q5VT06 3117 aa3.57□□□□□ -1.84
CCDC171-201ENST00000380701 PCNTO95613 3336 aa3.56□□□□□ -1.84
CCDC171-201ENST00000380701 UTP20O75691 2785 aaKnown RBP3.56□□□□□ -1.84
CCDC171-201ENST00000380701 C5orf42Q9H799 3197 aa3.56□□□□□ -1.84
CCDC171-201ENST00000380701 TENM3Q9P273 2699 aa3.54□□□□□ -1.84
CCDC171-201ENST00000380701 REV3LO60673 3130 aa3.53□□□□□ -1.84
CCDC171-201ENST00000380701 KRTAP13-4Q3LI77 160 aa3.51□□□□□ -1.85
CCDC171-201ENST00000380701 FRYQ5TBA9 3013 aa3.51□□□□□ -1.85
CCDC171-201ENST00000380701 BRCA2P51587 3418 aa3.5□□□□□ -1.85
CCDC171-201ENST00000380701 LAMA1P25391 3075 aa3.48□□□□□ -1.85
CCDC171-201ENST00000380701 DNAH12Q6ZR08 3092 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms