RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 LINC00472Q9H8W2 130 aa9.83□□□□□ -0.84
COL2A1-202ENST00000380518 HTTP42858 3142 aa9.83□□□□□ -0.84
COL2A1-202ENST00000380518 NOTCH1P46531 2555 aa9.82□□□□□ -0.84
COL2A1-202ENST00000380518 FLG2Q5D862 2391 aaPredicted RBP9.82□□□□□ -0.84
COL2A1-202ENST00000380518 COL6A5A8TX70 2615 aa9.8□□□□□ -0.84
COL2A1-202ENST00000380518 CHD9Q3L8U1 2897 aa9.79□□□□□ -0.84
COL2A1-202ENST00000380518 UNC79Q9P2D8 2635 aa9.79□□□□□ -0.84
COL2A1-202ENST00000380518 CYSTM1Q9H1C7 97 aa9.78□□□□□ -0.84
COL2A1-202ENST00000380518 GCN1Q92616 2671 aaKnown RBP9.77□□□□□ -0.85
COL2A1-202ENST00000380518 Q5XG85 94 aa9.76□□□□□ -0.85
COL2A1-202ENST00000380518 FP248Q71RG6 208 aaPredicted RBP9.76□□□□□ -0.85
COL2A1-202ENST00000380518 LUZP6Q538Z0 58 aa9.76□□□□□ -0.85
COL2A1-202ENST00000380518 CAMK2N1Q7Z7J9 78 aa9.76□□□□□ -0.85
COL2A1-202ENST00000380518 Q5W150 140 aa9.75□□□□□ -0.85
COL2A1-202ENST00000380518 KRTAP26-1Q6PEX3 210 aa9.75□□□□□ -0.85
COL2A1-202ENST00000380518 ZNF292O60281 2723 aa9.75□□□□□ -0.85
COL2A1-202ENST00000380518 KRTAP1-5Q9BYS1 174 aa9.74□□□□□ -0.85
COL2A1-202ENST00000380518 MGAQ8IWI9 3026 aa9.73□□□□□ -0.85
COL2A1-202ENST00000380518 RANBP2P49792 3224 aaKnown RBP9.71□□□□□ -0.85
COL2A1-202ENST00000380518 CFAP54Q96N23 3096 aa9.71□□□□□ -0.85
COL2A1-202ENST00000380518 CSAG1Q6PB30 78 aa9.71□□□□□ -0.85
COL2A1-202ENST00000380518 DMAC1Q96GE9 116 aa9.7□□□□□ -0.86
COL2A1-202ENST00000380518 A0A0C4DFX4 3053 aa9.68□□□□□ -0.86
COL2A1-202ENST00000380518 SPINK7P58062 85 aa9.67□□□□□ -0.86
COL2A1-202ENST00000380518 Q5VV11 94 aa9.67□□□□□ -0.86
COL2A1-202ENST00000380518 MKI67P46013 3256 aaKnown RBP9.67□□□□□ -0.86
COL2A1-202ENST00000380518 S4R3F8 94 aa9.64□□□□□ -0.87
COL2A1-202ENST00000380518 LAMA3Q16787 3333 aa9.61□□□□□ -0.87
COL2A1-202ENST00000380518 M0R2T5 61 aa9.59□□□□□ -0.87
COL2A1-202ENST00000380518 BRCA2P51587 3418 aa9.59□□□□□ -0.87
COL2A1-202ENST00000380518 LINC00483Q53H64 154 aa9.59□□□□□ -0.87
COL2A1-202ENST00000380518 DMBT1Q9UGM3 2413 aaPredicted RBP9.57□□□□□ -0.88
COL2A1-202ENST00000380518 MAP1AP78559 2803 aaPredicted RBP9.57□□□□□ -0.88
COL2A1-202ENST00000380518 PRAC1Q96KF2 57 aa9.57□□□□□ -0.88
COL2A1-202ENST00000380518 UBR5O95071 2799 aaPredicted RBP9.57□□□□□ -0.88
COL2A1-202ENST00000380518 KRTAP4-16G5E9R7 235 aaPredicted RBP9.56□□□□□ -0.88
COL2A1-202ENST00000380518 NBEAL2Q6ZNJ1 2754 aa9.56□□□□□ -0.88
COL2A1-202ENST00000380518 TRANK1O15050 2925 aa9.55□□□□□ -0.88
COL2A1-202ENST00000380518 KRTAP10-1P60331 282 aa9.54□□□□□ -0.88
COL2A1-202ENST00000380518 STAB2Q8WWQ8 2551 aa9.53□□□□□ -0.88
COL2A1-202ENST00000380518 LAMA2P24043 3122 aaKnown RBP9.52□□□□□ -0.88
COL2A1-202ENST00000380518 R4GN34 69 aa9.52□□□□□ -0.88
COL2A1-202ENST00000380518 OXTP01178 125 aa9.51□□□□□ -0.89
COL2A1-202ENST00000380518 KRTAP10-2P60368 255 aa9.51□□□□□ -0.89
COL2A1-202ENST00000380518 SEC61BP60468 96 aaKnown RBP9.5□□□□□ -0.89
COL2A1-202ENST00000380518 Q6ZR54 194 aa9.49□□□□□ -0.89
COL2A1-202ENST00000380518 DSPP15924 2871 aaKnown RBP9.49□□□□□ -0.89
COL2A1-202ENST00000380518 WDFY4Q6ZS81 3184 aa9.49□□□□□ -0.89
COL2A1-202ENST00000380518 KRTAP29-1A8MX34 341 aaPredicted RBP9.48□□□□□ -0.89
COL2A1-202ENST00000380518 Q5VSD8 79 aa9.47□□□□□ -0.89
COL2A1-202ENST00000380518 PANO1I0J062 215 aa9.46□□□□□ -0.89
COL2A1-202ENST00000380518 RPL37P61927 97 aaKnown RBP9.46□□□□□ -0.89
COL2A1-202ENST00000380518 IGSF10Q6WRI0 2623 aa9.46□□□□□ -0.9
COL2A1-202ENST00000380518 LCE6AA0A183 80 aa9.46□□□□□ -0.9
COL2A1-202ENST00000380518 NSD1Q96L73 2696 aaPredicted RBP9.44□□□□□ -0.9
COL2A1-202ENST00000380518 H1FX-AS1Q4G0G2 97 aa9.39□□□□□ -0.91
COL2A1-202ENST00000380518 UNC80Q8N2C7 3258 aa9.39□□□□□ -0.91
COL2A1-202ENST00000380518 PRUNE2Q8WUY3 3088 aa9.37□□□□□ -0.91
COL2A1-202ENST00000380518 ROMO1P60602 79 aa9.37□□□□□ -0.91
COL2A1-202ENST00000380518 BAHCC1Q9P281 2608 aa9.36□□□□□ -0.91
COL2A1-202ENST00000380518 A0A087X002 238 aa9.35□□□□□ -0.91
COL2A1-202ENST00000380518 M0QZ58 72 aa9.32□□□□□ -0.92
COL2A1-202ENST00000380518 FRYQ5TBA9 3013 aa9.29□□□□□ -0.92
COL2A1-202ENST00000380518 TRIOO75962 3097 aa9.29□□□□□ -0.92
COL2A1-202ENST00000380518 ITPR1Q14643 2758 aa9.29□□□□□ -0.92
COL2A1-202ENST00000380518 NOTCH2NLQ7Z3S9 236 aa9.28□□□□□ -0.92
COL2A1-202ENST00000380518 A0A0A0MQY5 61 aa9.28□□□□□ -0.92
COL2A1-202ENST00000380518 ASB16-AS1Q495Z4 193 aa9.28□□□□□ -0.92
COL2A1-202ENST00000380518 ITPR2Q14571 2701 aa9.26□□□□□ -0.93
COL2A1-202ENST00000380518 CDH23Q9H251 3354 aa9.26□□□□□ -0.93
COL2A1-202ENST00000380518 XIRP2A4UGR9 3374 aa9.25□□□□□ -0.93
COL2A1-202ENST00000380518 H3BS24 57 aa9.24□□□□□ -0.93
COL2A1-202ENST00000380518 KRTAP11-1Q8IUC1 163 aa9.24□□□□□ -0.93
COL2A1-202ENST00000380518 SPATA8Q6RVD6 105 aa9.23□□□□□ -0.93
COL2A1-202ENST00000380518 Q6ZRN7 208 aaPredicted RBP9.22□□□□□ -0.93
COL2A1-202ENST00000380518 ADM2Q7Z4H4 148 aa9.22□□□□□ -0.93
COL2A1-202ENST00000380518 VPS13AQ96RL7 3174 aa9.21□□□□□ -0.94
COL2A1-202ENST00000380518 RPS29P62273 56 aaKnown RBP9.2□□□□□ -0.94
COL2A1-202ENST00000380518 KRTAP7-1Q8IUC3 87 aa9.2□□□□□ -0.94
COL2A1-202ENST00000380518 FLNCQ14315 2725 aa9.17□□□□□ -0.94
COL2A1-202ENST00000380518 TACC2O95359 2948 aa9.15□□□□□ -0.95
COL2A1-202ENST00000380518 KRTAP13-1Q8IUC0 172 aa9.11□□□□□ -0.95
COL2A1-202ENST00000380518 PLAC4Q8WY50 150 aa9.09□□□□□ -0.95
COL2A1-202ENST00000380518 KRTAP13-2Q52LG2 175 aa9.07□□□□□ -0.96
COL2A1-202ENST00000380518 SZT2Q5T011 3432 aa9.07□□□□□ -0.96
COL2A1-202ENST00000380518 FREM2Q5SZK8 3169 aa9.07□□□□□ -0.96
COL2A1-202ENST00000380518 UTP20O75691 2785 aaKnown RBP9.06□□□□□ -0.96
COL2A1-202ENST00000380518 KALRNO60229 2985 aa9.06□□□□□ -0.96
COL2A1-202ENST00000380518 HIVEP1P15822 2718 aa9.06□□□□□ -0.96
COL2A1-202ENST00000380518 DMXL2Q8TDJ6 3036 aa9.04□□□□□ -0.96
COL2A1-202ENST00000380518 ATMQ13315 3056 aa9.02□□□□□ -0.97
COL2A1-202ENST00000380518 A6NN06 94 aa9.02□□□□□ -0.97
COL2A1-202ENST00000380518 APCP25054 2843 aa9.01□□□□□ -0.97
COL2A1-202ENST00000380518 NIPBLQ6KC79 2804 aaeCLIP9.01□□□□□ -0.97
COL2A1-202ENST00000380518 CELSR3Q9NYQ7 3312 aa9□□□□□ -0.97
COL2A1-202ENST00000380518 ASH1LQ9NR48 2969 aaKnown RBP8.99□□□□□ -0.97
COL2A1-202ENST00000380518 A8MU10 97 aa8.99□□□□□ -0.97
COL2A1-202ENST00000380518 KMT2BQ9UMN6 2715 aaPredicted RBP8.98□□□□□ -0.97
COL2A1-202ENST00000380518 REV3LO60673 3130 aa8.97□□□□□ -0.97
COL2A1-202ENST00000380518 COL12A1Q99715 3063 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms