RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 NDUFS5O43920 106 aa5.21□□□□□ -1.58
PTPRR-203ENST00000378778 CASC2Q6XLA1 102 aa5.21□□□□□ -1.58
PTPRR-203ENST00000378778 C9orf163Q8N9P6 203 aa5.21□□□□□ -1.58
PTPRR-203ENST00000378778 A8MWP4 228 aa5.2□□□□□ -1.58
PTPRR-203ENST00000378778 LRCOL1A6NCL2 159 aa5.19□□□□□ -1.58
PTPRR-203ENST00000378778 TP53AIP1Q9HCN2 124 aa5.19□□□□□ -1.58
PTPRR-203ENST00000378778 FN1P02751 2386 aaKnown RBP5.19□□□□□ -1.58
PTPRR-203ENST00000378778 IGLV7-46A0A075B6I9 117 aa5.19□□□□□ -1.58
PTPRR-203ENST00000378778 KTN1-AS1Q86SY8 53 aa5.18□□□□□ -1.58
PTPRR-203ENST00000378778 NBEAL1Q6ZS30 2694 aa5.18□□□□□ -1.58
PTPRR-203ENST00000378778 DEFB131BA0A096LNP1 70 aa5.18□□□□□ -1.58
PTPRR-203ENST00000378778 PLA2G1BP04054 148 aaKnown RBP5.18□□□□□ -1.58
PTPRR-203ENST00000378778 WFDC13Q8IUB5 93 aa5.18□□□□□ -1.58
PTPRR-203ENST00000378778 KRTAP7-1Q8IUC3 87 aa5.18□□□□□ -1.58
PTPRR-203ENST00000378778 A0A087WSZ3 146 aa5.17□□□□□ -1.58
PTPRR-203ENST00000378778 CHKB-CPT1BH3BT56 60 aa5.17□□□□□ -1.58
PTPRR-203ENST00000378778 FAM168BA1KXE4 195 aa5.16□□□□□ -1.58
PTPRR-203ENST00000378778 LINC00472Q9H8W2 130 aa5.16□□□□□ -1.58
PTPRR-203ENST00000378778 CNBPP62633 177 aaKnown RBP5.16□□□□□ -1.58
PTPRR-203ENST00000378778 PHF5AQ7RTV0 110 aaKnown RBP5.15□□□□□ -1.58
PTPRR-203ENST00000378778 C11orf45Q8TAV5 145 aa5.15□□□□□ -1.58
PTPRR-203ENST00000378778 C16orf90A8MZG2 172 aa5.15□□□□□ -1.59
PTPRR-203ENST00000378778 RPL37AP61513 92 aaKnown RBP5.15□□□□□ -1.59
PTPRR-203ENST00000378778 PRR15LQ9BU68 103 aa5.15□□□□□ -1.59
PTPRR-203ENST00000378778 CDC42SE1Q9NRR8 79 aa5.15□□□□□ -1.59
PTPRR-203ENST00000378778 LINC01558Q9Y6Z2 57 aa5.14□□□□□ -1.59
PTPRR-203ENST00000378778 ZNF469Q96JG9 3925 aaPredicted RBP5.14□□□□□ -1.59
PTPRR-203ENST00000378778 MOBPQ13875 183 aa5.14□□□□□ -1.59
PTPRR-203ENST00000378778 PRR4Q16378 134 aa5.14□□□□□ -1.59
PTPRR-203ENST00000378778 ASB16-AS1Q495Z4 193 aa5.13□□□□□ -1.59
PTPRR-203ENST00000378778 COA5Q86WW8 74 aa5.13□□□□□ -1.59
PTPRR-203ENST00000378778 PLAC8Q9NZF1 115 aa5.13□□□□□ -1.59
PTPRR-203ENST00000378778 SONP18583 2426 aaKnown RBP5.13□□□□□ -1.59
PTPRR-203ENST00000378778 HIVEP2P31629 2446 aa5.13□□□□□ -1.59
PTPRR-203ENST00000378778 LCE2CQ5TA81 110 aa5.12□□□□□ -1.59
PTPRR-203ENST00000378778 FLNAP21333 2647 aaKnown RBP5.12□□□□□ -1.59
PTPRR-203ENST00000378778 C14orf177Q52M58 125 aa5.12□□□□□ -1.59
PTPRR-203ENST00000378778 Q6ZR54 194 aa5.12□□□□□ -1.59
PTPRR-203ENST00000378778 ACANP16112 2415 aa5.12□□□□□ -1.59
PTPRR-203ENST00000378778 MMP24-AS1A0A0U1RRL7 71 aa5.11□□□□□ -1.59
PTPRR-203ENST00000378778 ANK3Q12955 4377 aaKnown RBP5.11□□□□□ -1.59
PTPRR-203ENST00000378778 LCE2BO14633 110 aa5.11□□□□□ -1.59
PTPRR-203ENST00000378778 A6NED7 52 aa5.1□□□□□ -1.59
PTPRR-203ENST00000378778 A6NN06 94 aa5.1□□□□□ -1.59
PTPRR-203ENST00000378778 STAB1Q9NY15 2570 aa5.1□□□□□ -1.59
PTPRR-203ENST00000378778 RETNQ9HD89 108 aa5.1□□□□□ -1.59
PTPRR-203ENST00000378778 COL6A5A8TX70 2615 aa5.08□□□□□ -1.6
PTPRR-203ENST00000378778 DEFB116Q30KQ4 102 aa5.08□□□□□ -1.6
PTPRR-203ENST00000378778 LCA10Q71F78 164 aa5.08□□□□□ -1.6
PTPRR-203ENST00000378778 NBEAL2Q6ZNJ1 2754 aa5.08□□□□□ -1.6
PTPRR-203ENST00000378778 ATRQ13535 2644 aa5.08□□□□□ -1.6
PTPRR-203ENST00000378778 PRLHP81277 87 aa5.08□□□□□ -1.6
PTPRR-203ENST00000378778 C7orf65Q6ZTY9 151 aa5.07□□□□□ -1.6
PTPRR-203ENST00000378778 A0A087X002 238 aa5.07□□□□□ -1.6
PTPRR-203ENST00000378778 A0A096LNI7 61 aa5.07□□□□□ -1.6
PTPRR-203ENST00000378778 CASC10Q5T4H9 136 aa5.07□□□□□ -1.6
PTPRR-203ENST00000378778 LCE2AQ5TA79 106 aaPredicted RBP5.06□□□□□ -1.6
PTPRR-203ENST00000378778 KRTAP10-11P60412 298 aa5.06□□□□□ -1.6
PTPRR-203ENST00000378778 FBN1P35555 2871 aaKnown RBP5.05□□□□□ -1.6
PTPRR-203ENST00000378778 A0A1W2PNN7 141 aa5.05□□□□□ -1.6
PTPRR-203ENST00000378778 SPTSSBQ8NFR3 76 aa5.05□□□□□ -1.6
PTPRR-203ENST00000378778 C8orf17Q9NRJ1 99 aa5.05□□□□□ -1.6
PTPRR-203ENST00000378778 RBM12B-AS1Q9P1G2 102 aa5.05□□□□□ -1.6
PTPRR-203ENST00000378778 SMR3AQ99954 134 aa5.04□□□□□ -1.6
PTPRR-203ENST00000378778 INAFM1C9JVW0 142 aa5.04□□□□□ -1.6
PTPRR-203ENST00000378778 IGKV2-24A0A0C4DH68 120 aa5.03□□□□□ -1.6
PTPRR-203ENST00000378778 A0A0G2JQZ4 141 aa5.03□□□□□ -1.6
PTPRR-203ENST00000378778 ZNF706Q9Y5V0 76 aaPredicted RBP5.03□□□□□ -1.6
PTPRR-203ENST00000378778 A0A1B0GVX0 72 aa5.02□□□□□ -1.61
PTPRR-203ENST00000378778 KRTAP13-1Q8IUC0 172 aa5.02□□□□□ -1.61
PTPRR-203ENST00000378778 Q96NJ1 140 aa5.02□□□□□ -1.61
PTPRR-203ENST00000378778 LINC00483Q53H64 154 aa5.02□□□□□ -1.61
PTPRR-203ENST00000378778 A8MU10 97 aa5.01□□□□□ -1.61
PTPRR-203ENST00000378778 CDK2AP2O75956 126 aa5.01□□□□□ -1.61
PTPRR-203ENST00000378778 PRB2P02812 416 aaPredicted RBP5.01□□□□□ -1.61
PTPRR-203ENST00000378778 MRPL34Q9BQ48 92 aaKnown RBP5.01□□□□□ -1.61
PTPRR-203ENST00000378778 HRES1P13985 223 aa5□□□□□ -1.61
PTPRR-203ENST00000378778 NSD1Q96L73 2696 aaPredicted RBP4.99□□□□□ -1.61
PTPRR-203ENST00000378778 PCOTHQ58A44 107 aa4.98□□□□□ -1.61
PTPRR-203ENST00000378778 SPAG11AQ6PDA7 123 aa4.98□□□□□ -1.61
PTPRR-203ENST00000378778 ACYP2P14621 99 aa4.97□□□□□ -1.61
PTPRR-203ENST00000378778 CUBNO60494 3623 aa4.96□□□□□ -1.62
PTPRR-203ENST00000378778 DNAH1Q9P2D7 4330 aa4.96□□□□□ -1.62
PTPRR-203ENST00000378778 PRR26Q8N8Z3 221 aa4.95□□□□□ -1.62
PTPRR-203ENST00000378778 VWFP04275 2813 aa4.95□□□□□ -1.62
PTPRR-203ENST00000378778 C8orf87E5RJ46 101 aa4.95□□□□□ -1.62
PTPRR-203ENST00000378778 KRTAP11-1Q8IUC1 163 aa4.94□□□□□ -1.62
PTPRR-203ENST00000378778 SPINK7P58062 85 aa4.93□□□□□ -1.62
PTPRR-203ENST00000378778 IGHV6-1A0A0B4J1U7 121 aa4.93□□□□□ -1.62
PTPRR-203ENST00000378778 KRTAP13-3Q3SY46 172 aa4.93□□□□□ -1.62
PTPRR-203ENST00000378778 DMAC1Q96GE9 116 aa4.92□□□□□ -1.62
PTPRR-203ENST00000378778 CHTF8P0CG12 524 aa4.91□□□□□ -1.62
PTPRR-203ENST00000378778 PKD1L1Q8TDX9 2849 aa4.91□□□□□ -1.62
PTPRR-203ENST00000378778 UBE2DNLQ8IWF7 75 aa4.91□□□□□ -1.62
PTPRR-203ENST00000378778 WWC2-AS2Q96NR7 200 aa4.91□□□□□ -1.62
PTPRR-203ENST00000378778 KRTAP1-5Q9BYS1 174 aa4.91□□□□□ -1.62
PTPRR-203ENST00000378778 IGLV9-49A0A0B4J1Y8 123 aa4.9□□□□□ -1.63
PTPRR-203ENST00000378778 SPATA8Q6RVD6 105 aa4.9□□□□□ -1.63
PTPRR-203ENST00000378778 SPACA4Q8TDM5 124 aa4.9□□□□□ -1.63
PTPRR-203ENST00000378778 DNAH3Q8TD57 4116 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms