RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 LINC00483Q53H64 154 aa9.39□□□□□ -0.91
PRDM16-203ENST00000378391 DMXL2Q8TDJ6 3036 aa9.39□□□□□ -0.91
PRDM16-203ENST00000378391 MGAM2Q2M2H8 2515 aa9.38□□□□□ -0.91
PRDM16-203ENST00000378391 FAM229BQ4G0N7 80 aa9.37□□□□□ -0.91
PRDM16-203ENST00000378391 ZNF861PO60384 105 aa9.37□□□□□ -0.91
PRDM16-203ENST00000378391 PRR26Q8N8Z3 221 aa9.37□□□□□ -0.91
PRDM16-203ENST00000378391 IGLV5-48A0A075B6I7 105 aa9.37□□□□□ -0.91
PRDM16-203ENST00000378391 TNRC18O15417 2968 aaPredicted RBP9.36□□□□□ -0.91
PRDM16-203ENST00000378391 HECTD1Q9ULT8 2610 aa9.35□□□□□ -0.91
PRDM16-203ENST00000378391 SPINK7P58062 85 aa9.35□□□□□ -0.91
PRDM16-203ENST00000378391 A0A0G2JQZ4 141 aa9.35□□□□□ -0.91
PRDM16-203ENST00000378391 A0A1W2PNN7 141 aa9.35□□□□□ -0.91
PRDM16-203ENST00000378391 IGLV7-43P04211 117 aa9.35□□□□□ -0.91
PRDM16-203ENST00000378391 OXTP01178 125 aa9.34□□□□□ -0.91
PRDM16-203ENST00000378391 Q8N9P0 234 aaPredicted RBP9.34□□□□□ -0.91
PRDM16-203ENST00000378391 Q5VV11 94 aa9.34□□□□□ -0.91
PRDM16-203ENST00000378391 Q8NDZ9 215 aa9.34□□□□□ -0.92
PRDM16-203ENST00000378391 DSCR10P59022 87 aa9.33□□□□□ -0.92
PRDM16-203ENST00000378391 DCHS1Q96JQ0 3298 aa9.33□□□□□ -0.92
PRDM16-203ENST00000378391 LINC01558Q9Y6Z2 57 aa9.33□□□□□ -0.92
PRDM16-203ENST00000378391 ASPMQ8IZT6 3477 aa9.33□□□□□ -0.92
PRDM16-203ENST00000378391 KRTAP10-11P60412 298 aa9.32□□□□□ -0.92
PRDM16-203ENST00000378391 MAP1AP78559 2803 aaPredicted RBP9.32□□□□□ -0.92
PRDM16-203ENST00000378391 OCR1Q9BZK8 76 aa9.3□□□□□ -0.92
PRDM16-203ENST00000378391 CFAP47Q6ZTR5 3102 aa9.3□□□□□ -0.92
PRDM16-203ENST00000378391 K7EIL1 84 aa9.29□□□□□ -0.92
PRDM16-203ENST00000378391 KRTAP10-3P60369 221 aa9.29□□□□□ -0.92
PRDM16-203ENST00000378391 IGLV5-37A0A075B6J1 123 aa9.28□□□□□ -0.92
PRDM16-203ENST00000378391 ATMQ13315 3056 aa9.28□□□□□ -0.92
PRDM16-203ENST00000378391 CNBPP62633 177 aaKnown RBP9.27□□□□□ -0.92
PRDM16-203ENST00000378391 SMG1Q96Q15 3661 aaKnown RBP9.27□□□□□ -0.93
PRDM16-203ENST00000378391 DMXL1Q9Y485 3027 aa9.26□□□□□ -0.93
PRDM16-203ENST00000378391 SPRR4Q96PI1 79 aa9.25□□□□□ -0.93
PRDM16-203ENST00000378391 A0A087WTM6 91 aa9.25□□□□□ -0.93
PRDM16-203ENST00000378391 KRTAP1-3Q8IUG1 177 aa9.25□□□□□ -0.93
PRDM16-203ENST00000378391 IGLV7-46A0A075B6I9 117 aa9.24□□□□□ -0.93
PRDM16-203ENST00000378391 WWC2-AS2Q96NR7 200 aa9.24□□□□□ -0.93
PRDM16-203ENST00000378391 A0A1B0GU33 70 aa9.24□□□□□ -0.93
PRDM16-203ENST00000378391 CASC10Q5T4H9 136 aa9.22□□□□□ -0.93
PRDM16-203ENST00000378391 ASB16-AS1Q495Z4 193 aa9.22□□□□□ -0.93
PRDM16-203ENST00000378391 LINC00304Q8N9R0 145 aa9.22□□□□□ -0.93
PRDM16-203ENST00000378391 CR1P17927 2039 aa9.21□□□□□ -0.93
PRDM16-203ENST00000378391 HRNRQ86YZ3 2850 aaPredicted RBP9.21□□□□□ -0.93
PRDM16-203ENST00000378391 ATRQ13535 2644 aa9.21□□□□□ -0.94
PRDM16-203ENST00000378391 J3QL48 77 aa9.2□□□□□ -0.94
PRDM16-203ENST00000378391 PSORS1C2Q9UIG4 136 aa9.2□□□□□ -0.94
PRDM16-203ENST00000378391 CENPEQ02224 2701 aa9.2□□□□□ -0.94
PRDM16-203ENST00000378391 ANAPC11Q9NYG5 84 aa9.19□□□□□ -0.94
PRDM16-203ENST00000378391 CSMD1Q96PZ7 3565 aa9.18□□□□□ -0.94
PRDM16-203ENST00000378391 FLNAP21333 2647 aaKnown RBP9.18□□□□□ -0.94
PRDM16-203ENST00000378391 MAST4O15021 2626 aa9.17□□□□□ -0.94
PRDM16-203ENST00000378391 CHD6Q8TD26 2715 aa9.17□□□□□ -0.94
PRDM16-203ENST00000378391 LAMA5O15230 3695 aa9.15□□□□□ -0.95
PRDM16-203ENST00000378391 COX6B2Q6YFQ2 88 aa9.14□□□□□ -0.95
PRDM16-203ENST00000378391 HELZ2Q9BYK8 2649 aaKnown RBP9.13□□□□□ -0.95
PRDM16-203ENST00000378391 KRTAP1-1Q07627 177 aa9.12□□□□□ -0.95
PRDM16-203ENST00000378391 MUC3AQ02505 3323 aa9.12□□□□□ -0.95
PRDM16-203ENST00000378391 NDUFAF8A1L188 74 aa9.12□□□□□ -0.95
PRDM16-203ENST00000378391 ITPR3Q14573 2671 aa9.11□□□□□ -0.95
PRDM16-203ENST00000378391 C9orf92A6NGG3 77 aa9.09□□□□□ -0.95
PRDM16-203ENST00000378391 Q8N1X5 172 aa9.09□□□□□ -0.95
PRDM16-203ENST00000378391 ROMO1P60602 79 aa9.06□□□□□ -0.96
PRDM16-203ENST00000378391 RELNP78509 3460 aa9.04□□□□□ -0.96
PRDM16-203ENST00000378391 DCHS2Q6V1P9 2916 aa9.04□□□□□ -0.96
PRDM16-203ENST00000378391 GCN1Q92616 2671 aaKnown RBP9.04□□□□□ -0.96
PRDM16-203ENST00000378391 COL12A1Q99715 3063 aa9.03□□□□□ -0.96
PRDM16-203ENST00000378391 FLG2Q5D862 2391 aaPredicted RBP9.03□□□□□ -0.96
PRDM16-203ENST00000378391 SPRR1AP35321 89 aa9.02□□□□□ -0.96
PRDM16-203ENST00000378391 TEX15Q9BXT5 2789 aa9.02□□□□□ -0.97
PRDM16-203ENST00000378391 MMP24-AS1A0A0U1RRL7 71 aa8.98□□□□□ -0.97
PRDM16-203ENST00000378391 HRES1P13985 223 aa8.98□□□□□ -0.97
PRDM16-203ENST00000378391 NBEAL2Q6ZNJ1 2754 aa8.97□□□□□ -0.97
PRDM16-203ENST00000378391 A6NN06 94 aa8.97□□□□□ -0.97
PRDM16-203ENST00000378391 ASH1LQ9NR48 2969 aaKnown RBP8.97□□□□□ -0.97
PRDM16-203ENST00000378391 SMR3BP02814 79 aaPredicted RBP8.97□□□□□ -0.97
PRDM16-203ENST00000378391 ITPR1Q14643 2758 aa8.95□□□□□ -0.98
PRDM16-203ENST00000378391 CFAP46Q8IYW2 2715 aa8.94□□□□□ -0.98
PRDM16-203ENST00000378391 KRTAP26-1Q6PEX3 210 aa8.94□□□□□ -0.98
PRDM16-203ENST00000378391 SPENQ96T58 3664 aaKnown RBP8.94□□□□□ -0.98
PRDM16-203ENST00000378391 KRTAP25-1Q3LHN0 102 aa8.93□□□□□ -0.98
PRDM16-203ENST00000378391 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.93□□□□□ -0.98
PRDM16-203ENST00000378391 SVEP1Q4LDE5 3571 aa8.93□□□□□ -0.98
PRDM16-203ENST00000378391 SPRR1BP22528 89 aa8.92□□□□□ -0.98
PRDM16-203ENST00000378391 FLNCQ14315 2725 aa8.91□□□□□ -0.98
PRDM16-203ENST00000378391 STAB1Q9NY15 2570 aa8.91□□□□□ -0.98
PRDM16-203ENST00000378391 LINC00472Q9H8W2 130 aa8.9□□□□□ -0.98
PRDM16-203ENST00000378391 IGSF10Q6WRI0 2623 aa8.9□□□□□ -0.99
PRDM16-203ENST00000378391 RPL37P61927 97 aaKnown RBP8.87□□□□□ -0.99
PRDM16-203ENST00000378391 ZANQ9Y493 2812 aa8.87□□□□□ -0.99
PRDM16-203ENST00000378391 TNP2Q05952 138 aa8.86□□□□□ -0.99
PRDM16-203ENST00000378391 UTP20O75691 2785 aaKnown RBP8.85□□□□□ -0.99
PRDM16-203ENST00000378391 H1FX-AS1Q4G0G2 97 aa8.84□□□□□ -0.99
PRDM16-203ENST00000378391 PLAC8Q9NZF1 115 aa8.84□□□□□ -0.99
PRDM16-203ENST00000378391 NBEAL1Q6ZS30 2694 aa8.81□□□□□ -1
PRDM16-203ENST00000378391 KRTAP4-16G5E9R7 235 aaPredicted RBP8.8□□□□□ -1
PRDM16-203ENST00000378391 ZCCHC13Q8WW36 166 aaKnown RBP8.8□□□□□ -1
PRDM16-203ENST00000378391 UNC79Q9P2D8 2635 aa8.79□□□□□ -1
PRDM16-203ENST00000378391 ADM2Q7Z4H4 148 aa8.79□□□□□ -1
PRDM16-203ENST00000378391 SETXQ7Z333 2677 aaKnown RBP8.79□□□□□ -1
PRDM16-203ENST00000378391 Q5W150 140 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 297.9 ms