RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 IGKV2-24A0A0C4DH68 120 aa11.37□□□□□ -0.59
GNE-201ENST00000377902 hDV103S1A0JD37 113 aa11.37□□□□□ -0.59
GNE-201ENST00000377902 WFDC13Q8IUB5 93 aa11.37□□□□□ -0.59
GNE-201ENST00000377902 HCG22E2RYF7 251 aa11.37□□□□□ -0.59
GNE-201ENST00000377902 RPL37AP61513 92 aaKnown RBP11.36□□□□□ -0.59
GNE-201ENST00000377902 NBEAL1Q6ZS30 2694 aa11.35□□□□□ -0.59
GNE-201ENST00000377902 A0A087WSZ3 146 aa11.34□□□□□ -0.59
GNE-201ENST00000377902 DNAH3Q8TD57 4116 aa11.33□□□□□ -0.6
GNE-201ENST00000377902 A0A096LNI7 61 aa11.33□□□□□ -0.6
GNE-201ENST00000377902 DNAH9Q9NYC9 4486 aa11.31□□□□□ -0.6
GNE-201ENST00000377902 HUWE1Q7Z6Z7 4374 aaKnown RBP11.3□□□□□ -0.6
GNE-201ENST00000377902 KRTAP24-1Q3LI83 254 aa11.29□□□□□ -0.6
GNE-201ENST00000377902 KRTAP11-1Q8IUC1 163 aa11.28□□□□□ -0.6
GNE-201ENST00000377902 KRTAP1-5Q9BYS1 174 aa11.27□□□□□ -0.61
GNE-201ENST00000377902 PSPHP1O15172 72 aa11.24□□□□□ -0.61
GNE-201ENST00000377902 CHTF8P0CG12 524 aa11.24□□□□□ -0.61
GNE-201ENST00000377902 UBE2AP49459 152 aa11.23□□□□□ -0.61
GNE-201ENST00000377902 LINC00208Q96KT6 92 aa11.23□□□□□ -0.61
GNE-201ENST00000377902 COL7A1Q02388 2944 aa11.23□□□□□ -0.61
GNE-201ENST00000377902 PHF5AQ7RTV0 110 aaKnown RBP11.22□□□□□ -0.61
GNE-201ENST00000377902 C16orf90A8MZG2 172 aa11.21□□□□□ -0.61
GNE-201ENST00000377902 TENM2Q9NT68 2774 aa11.2□□□□□ -0.62
GNE-201ENST00000377902 Q1T7F1 81 aa11.2□□□□□ -0.62
GNE-201ENST00000377902 IGLV8-61A0A075B6I0 122 aa11.19□□□□□ -0.62
GNE-201ENST00000377902 KRTAP29-1A8MX34 341 aaPredicted RBP11.19□□□□□ -0.62
GNE-201ENST00000377902 TRAV22A0A0B4J277 110 aa11.18□□□□□ -0.62
GNE-201ENST00000377902 CYP4F30PQ9H0H9 118 aa11.18□□□□□ -0.62
GNE-201ENST00000377902 MP68P56378 58 aa11.17□□□□□ -0.62
GNE-201ENST00000377902 DNAH7Q8WXX0 4024 aa11.17□□□□□ -0.62
GNE-201ENST00000377902 CNBPP62633 177 aaKnown RBP11.17□□□□□ -0.62
GNE-201ENST00000377902 CASC2Q6XLA1 102 aa11.16□□□□□ -0.62
GNE-201ENST00000377902 STAB2Q8WWQ8 2551 aa11.15□□□□□ -0.62
GNE-201ENST00000377902 C1orf195Q5TG92 126 aa11.15□□□□□ -0.63
GNE-201ENST00000377902 H0Y9P7 68 aa11.14□□□□□ -0.63
GNE-201ENST00000377902 PRR15Q8IV56 129 aa11.13□□□□□ -0.63
GNE-201ENST00000377902 NDUFB1O75438 58 aa11.12□□□□□ -0.63
GNE-201ENST00000377902 K7EIL1 84 aa11.11□□□□□ -0.63
GNE-201ENST00000377902 A8MUN3 132 aa11.11□□□□□ -0.63
GNE-201ENST00000377902 B9D2Q9BPU9 175 aa11.11□□□□□ -0.63
GNE-201ENST00000377902 LINC00472Q9H8W2 130 aa11.11□□□□□ -0.63
GNE-201ENST00000377902 A8MU10 97 aa11.08□□□□□ -0.64
GNE-201ENST00000377902 A8MWP4 228 aa11.08□□□□□ -0.64
GNE-201ENST00000377902 H0Y9J4 135 aa11.07□□□□□ -0.64
GNE-201ENST00000377902 MGAM2Q2M2H8 2515 aa11.07□□□□□ -0.64
GNE-201ENST00000377902 PANO1I0J062 215 aa11.06□□□□□ -0.64
GNE-201ENST00000377902 SPRR1BP22528 89 aa11.04□□□□□ -0.64
GNE-201ENST00000377902 UBE2DNLQ8IWF7 75 aa11.03□□□□□ -0.64
GNE-201ENST00000377902 MMP24-AS1A0A0U1RRL7 71 aa11□□□□□ -0.65
GNE-201ENST00000377902 IGLV9-49A0A0B4J1Y8 123 aa10.99□□□□□ -0.65
GNE-201ENST00000377902 Q5VV11 94 aa10.99□□□□□ -0.65
GNE-201ENST00000377902 C9orf163Q8N9P6 203 aa10.99□□□□□ -0.65
GNE-201ENST00000377902 SPANXA2-OT1Q8N9U9 137 aa10.98□□□□□ -0.65
GNE-201ENST00000377902 Q8N9P0 234 aaPredicted RBP10.97□□□□□ -0.65
GNE-201ENST00000377902 PCOTHQ58A44 107 aa10.96□□□□□ -0.65
GNE-201ENST00000377902 V9GYY9 64 aa10.96□□□□□ -0.66
GNE-201ENST00000377902 PLECQ15149 4684 aaKnown RBP10.95□□□□□ -0.66
GNE-201ENST00000377902 H3BPC8 53 aa10.95□□□□□ -0.66
GNE-201ENST00000377902 APLNQ9ULZ1 77 aa10.94□□□□□ -0.66
GNE-201ENST00000377902 Q96NJ1 140 aa10.93□□□□□ -0.66
GNE-201ENST00000377902 FRAS1Q86XX4 4008 aa10.93□□□□□ -0.66
GNE-201ENST00000377902 KRTAP13-1Q8IUC0 172 aa10.92□□□□□ -0.66
GNE-201ENST00000377902 C14orf177Q52M58 125 aa10.91□□□□□ -0.66
GNE-201ENST00000377902 PRR15LQ9BU68 103 aa10.91□□□□□ -0.66
GNE-201ENST00000377902 CHKB-CPT1BH3BT56 60 aa10.91□□□□□ -0.66
GNE-201ENST00000377902 COA5Q86WW8 74 aa10.9□□□□□ -0.66
GNE-201ENST00000377902 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.89□□□□□ -0.67
GNE-201ENST00000377902 CD164Q04900 197 aa10.88□□□□□ -0.67
GNE-201ENST00000377902 MOBPQ13875 183 aa10.88□□□□□ -0.67
GNE-201ENST00000377902 ANAPC11Q9NYG5 84 aa10.88□□□□□ -0.67
GNE-201ENST00000377902 IGLV7-46A0A075B6I9 117 aa10.86□□□□□ -0.67
GNE-201ENST00000377902 PMAIP1Q13794 54 aa10.86□□□□□ -0.67
GNE-201ENST00000377902 IGHV6-1A0A0B4J1U7 121 aa10.85□□□□□ -0.67
GNE-201ENST00000377902 NDUFS5O43920 106 aa10.85□□□□□ -0.67
GNE-201ENST00000377902 LIMD2Q9BT23 127 aa10.84□□□□□ -0.67
GNE-201ENST00000377902 C8orf17Q9NRJ1 99 aa10.83□□□□□ -0.68
GNE-201ENST00000377902 A0A087X002 238 aa10.83□□□□□ -0.68
GNE-201ENST00000377902 NOTCH2NLQ7Z3S9 236 aa10.83□□□□□ -0.68
GNE-201ENST00000377902 ASB16-AS1Q495Z4 193 aa10.82□□□□□ -0.68
GNE-201ENST00000377902 DYNC2H1Q8NCM8 4307 aaKnown RBP10.82□□□□□ -0.68
GNE-201ENST00000377902 NBDYA0A0U1RRE5 68 aa10.81□□□□□ -0.68
GNE-201ENST00000377902 Q6ZRN7 208 aaPredicted RBP10.81□□□□□ -0.68
GNE-201ENST00000377902 DNAH8Q96JB1 4490 aa10.8□□□□□ -0.68
GNE-201ENST00000377902 SEC61GP60059 68 aa10.79□□□□□ -0.68
GNE-201ENST00000377902 SPACA4Q8TDM5 124 aa10.78□□□□□ -0.68
GNE-201ENST00000377902 SPAG11AQ6PDA7 123 aa10.78□□□□□ -0.68
GNE-201ENST00000377902 LCA10Q71F78 164 aa10.78□□□□□ -0.68
GNE-201ENST00000377902 MDFIQ99750 246 aa10.78□□□□□ -0.68
GNE-201ENST00000377902 SPTSSBQ8NFR3 76 aa10.76□□□□□ -0.69
GNE-201ENST00000377902 HECTD4Q9Y4D8 3996 aa10.76□□□□□ -0.69
GNE-201ENST00000377902 Q6ZR54 194 aa10.76□□□□□ -0.69
GNE-201ENST00000377902 TP53AIP1Q9HCN2 124 aa10.76□□□□□ -0.69
GNE-201ENST00000377902 A0A1B0GVX0 72 aa10.75□□□□□ -0.69
GNE-201ENST00000377902 WWC2-AS2Q96NR7 200 aa10.75□□□□□ -0.69
GNE-201ENST00000377902 A6NED7 52 aa10.74□□□□□ -0.69
GNE-201ENST00000377902 STARD9Q9P2P6 4700 aa10.74□□□□□ -0.69
GNE-201ENST00000377902 LINC00483Q53H64 154 aa10.74□□□□□ -0.69
GNE-201ENST00000377902 PSORS1C2Q9UIG4 136 aa10.73□□□□□ -0.69
GNE-201ENST00000377902 Q75L30 129 aa10.72□□□□□ -0.69
GNE-201ENST00000377902 LOC101927531A0A1B0GV80 90 aa10.72□□□□□ -0.69
GNE-201ENST00000377902 MRPL34Q9BQ48 92 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms