RNA–Protein interactions for RNA: ENST00000375835.8

SHC3-202, Transcript of SHC adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHC3, Length 9,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3-202ENST00000375835 ANAPC11Q9NYG5 84 aa11.22□□□□□ -0.61
SHC3-202ENST00000375835 APCP25054 2843 aa11.22□□□□□ -0.61
SHC3-202ENST00000375835 ITPR2Q14571 2701 aa11.22□□□□□ -0.61
SHC3-202ENST00000375835 A0A096LNT2 108 aa11.21□□□□□ -0.62
SHC3-202ENST00000375835 TEP1Q99973 2627 aaKnown RBP11.19□□□□□ -0.62
SHC3-202ENST00000375835 K7EIL1 84 aa11.19□□□□□ -0.62
SHC3-202ENST00000375835 RPL37P61927 97 aaKnown RBP11.18□□□□□ -0.62
SHC3-202ENST00000375835 KRTAP16-1A8MUX0 517 aa11.18□□□□□ -0.62
SHC3-202ENST00000375835 CYSTM1Q9H1C7 97 aa11.17□□□□□ -0.62
SHC3-202ENST00000375835 Q5W150 140 aa11.17□□□□□ -0.62
SHC3-202ENST00000375835 LINC00472Q9H8W2 130 aa11.15□□□□□ -0.62
SHC3-202ENST00000375835 SPRR1AP35321 89 aa11.13□□□□□ -0.63
SHC3-202ENST00000375835 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.12□□□□□ -0.63
SHC3-202ENST00000375835 DNAH12Q6ZR08 3092 aa11.1□□□□□ -0.63
SHC3-202ENST00000375835 Q6ZR54 194 aa11.1□□□□□ -0.63
SHC3-202ENST00000375835 SPRR1BP22528 89 aa11.08□□□□□ -0.64
SHC3-202ENST00000375835 R4GN34 69 aa11.07□□□□□ -0.64
SHC3-202ENST00000375835 H1FX-AS1Q4G0G2 97 aa11.07□□□□□ -0.64
SHC3-202ENST00000375835 MAP1AP78559 2803 aaPredicted RBP11.05□□□□□ -0.64
SHC3-202ENST00000375835 SRCAPQ6ZRS2 3230 aa11.04□□□□□ -0.64
SHC3-202ENST00000375835 SETXQ7Z333 2677 aaKnown RBP11.03□□□□□ -0.64
SHC3-202ENST00000375835 ZNF292O60281 2723 aa11.01□□□□□ -0.65
SHC3-202ENST00000375835 A0A087X002 238 aa11□□□□□ -0.65
SHC3-202ENST00000375835 CASC10Q5T4H9 136 aa11□□□□□ -0.65
SHC3-202ENST00000375835 PLAC8Q9NZF1 115 aa11□□□□□ -0.65
SHC3-202ENST00000375835 OXTP01178 125 aa10.99□□□□□ -0.65
SHC3-202ENST00000375835 SPATA8Q6RVD6 105 aa10.96□□□□□ -0.65
SHC3-202ENST00000375835 ITPR1Q14643 2758 aa10.94□□□□□ -0.66
SHC3-202ENST00000375835 SMR3BP02814 79 aaPredicted RBP10.92□□□□□ -0.66
SHC3-202ENST00000375835 CEP350Q5VT06 3117 aa10.91□□□□□ -0.66
SHC3-202ENST00000375835 BAHCC1Q9P281 2608 aa10.91□□□□□ -0.66
SHC3-202ENST00000375835 NBEAL2Q6ZNJ1 2754 aa10.89□□□□□ -0.67
SHC3-202ENST00000375835 A6NN06 94 aa10.88□□□□□ -0.67
SHC3-202ENST00000375835 UTP20O75691 2785 aaKnown RBP10.88□□□□□ -0.67
SHC3-202ENST00000375835 NSD1Q96L73 2696 aaPredicted RBP10.88□□□□□ -0.67
SHC3-202ENST00000375835 KRTAP10-3P60369 221 aa10.86□□□□□ -0.67
SHC3-202ENST00000375835 KRTAP25-1Q3LHN0 102 aa10.86□□□□□ -0.67
SHC3-202ENST00000375835 M0R2T5 61 aa10.85□□□□□ -0.67
SHC3-202ENST00000375835 KRTAP26-1Q6PEX3 210 aa10.85□□□□□ -0.67
SHC3-202ENST00000375835 SEC61BP60468 96 aaKnown RBP10.81□□□□□ -0.68
SHC3-202ENST00000375835 M0QZ58 72 aa10.79□□□□□ -0.68
SHC3-202ENST00000375835 PANO1I0J062 215 aa10.78□□□□□ -0.68
SHC3-202ENST00000375835 CFAP54Q96N23 3096 aa10.76□□□□□ -0.69
SHC3-202ENST00000375835 Q8NDZ9 215 aa10.76□□□□□ -0.69
SHC3-202ENST00000375835 KRTAP29-1A8MX34 341 aaPredicted RBP10.72□□□□□ -0.69
SHC3-202ENST00000375835 C5orf42Q9H799 3197 aa10.72□□□□□ -0.69
SHC3-202ENST00000375835 UBR5O95071 2799 aaPredicted RBP10.71□□□□□ -0.69
SHC3-202ENST00000375835 LCE6AA0A183 80 aa10.7□□□□□ -0.7
SHC3-202ENST00000375835 TRANK1O15050 2925 aa10.7□□□□□ -0.7
SHC3-202ENST00000375835 PCNTO95613 3336 aa10.69□□□□□ -0.7
SHC3-202ENST00000375835 IGSF10Q6WRI0 2623 aa10.69□□□□□ -0.7
SHC3-202ENST00000375835 PLAC4Q8WY50 150 aa10.68□□□□□ -0.7
SHC3-202ENST00000375835 ADM2Q7Z4H4 148 aa10.66□□□□□ -0.7
SHC3-202ENST00000375835 RPS29P62273 56 aaKnown RBP10.62□□□□□ -0.71
SHC3-202ENST00000375835 KRTAP4-16G5E9R7 235 aaPredicted RBP10.62□□□□□ -0.71
SHC3-202ENST00000375835 KRTAP1-3Q8IUG1 177 aa10.59□□□□□ -0.71
SHC3-202ENST00000375835 A0A0C4DFX4 3053 aa10.57□□□□□ -0.72
SHC3-202ENST00000375835 GOLGB1Q14789 3259 aaKnown RBP10.56□□□□□ -0.72
SHC3-202ENST00000375835 KRTAP1-1Q07627 177 aa10.54□□□□□ -0.72
SHC3-202ENST00000375835 LRBAP50851 2863 aa10.54□□□□□ -0.72
SHC3-202ENST00000375835 NDUFAF8A1L188 74 aa10.54□□□□□ -0.72
SHC3-202ENST00000375835 DSPP15924 2871 aaKnown RBP10.53□□□□□ -0.72
SHC3-202ENST00000375835 C20orf166-AS1Q96NR2 134 aa10.47□□□□□ -0.73
SHC3-202ENST00000375835 UTRNP46939 3433 aa10.44□□□□□ -0.74
SHC3-202ENST00000375835 MGAQ8IWI9 3026 aa10.43□□□□□ -0.74
SHC3-202ENST00000375835 PP632Q6XCG6 107 aa10.41□□□□□ -0.74
SHC3-202ENST00000375835 LAMA2P24043 3122 aaKnown RBP10.39□□□□□ -0.75
SHC3-202ENST00000375835 FRYQ5TBA9 3013 aa10.39□□□□□ -0.75
SHC3-202ENST00000375835 Q5VSD8 79 aa10.33□□□□□ -0.76
SHC3-202ENST00000375835 A8MUU9 505 aa10.32□□□□□ -0.76
SHC3-202ENST00000375835 FRYLO94915 3013 aa10.31□□□□□ -0.76
SHC3-202ENST00000375835 KRTAP1-5Q9BYS1 174 aa10.3□□□□□ -0.76
SHC3-202ENST00000375835 CHD7Q9P2D1 2997 aa10.26□□□□□ -0.77
SHC3-202ENST00000375835 NOTCH2NLQ7Z3S9 236 aa10.26□□□□□ -0.77
SHC3-202ENST00000375835 KALRNO60229 2985 aa10.25□□□□□ -0.77
SHC3-202ENST00000375835 KRTAP11-1Q8IUC1 163 aa10.25□□□□□ -0.77
SHC3-202ENST00000375835 FLNCQ14315 2725 aa10.23□□□□□ -0.77
SHC3-202ENST00000375835 TNP1P09430 55 aa10.21□□□□□ -0.77
SHC3-202ENST00000375835 CHD9Q3L8U1 2897 aa10.21□□□□□ -0.78
SHC3-202ENST00000375835 A8MU10 97 aa10.2□□□□□ -0.78
SHC3-202ENST00000375835 VPS13AQ96RL7 3174 aa10.18□□□□□ -0.78
SHC3-202ENST00000375835 NIPBLQ6KC79 2804 aaeCLIP10.17□□□□□ -0.78
SHC3-202ENST00000375835 C10orf95Q9H7T3 257 aa10.15□□□□□ -0.78
SHC3-202ENST00000375835 KRTAP10-1P60331 282 aa10.14□□□□□ -0.79
SHC3-202ENST00000375835 HIVEP1P15822 2718 aa10.13□□□□□ -0.79
SHC3-202ENST00000375835 TACC2O95359 2948 aa10.12□□□□□ -0.79
SHC3-202ENST00000375835 ASH1LQ9NR48 2969 aaKnown RBP10.08□□□□□ -0.8
SHC3-202ENST00000375835 TGP01266 2768 aa10.06□□□□□ -0.8
SHC3-202ENST00000375835 TENM1Q9UKZ4 2725 aa10.06□□□□□ -0.8
SHC3-202ENST00000375835 TENM3Q9P273 2699 aa10.06□□□□□ -0.8
SHC3-202ENST00000375835 KRTAP10-2P60368 255 aa10.05□□□□□ -0.8
SHC3-202ENST00000375835 NF1P21359 2839 aa10.04□□□□□ -0.8
SHC3-202ENST00000375835 TRIOO75962 3097 aa10.03□□□□□ -0.8
SHC3-202ENST00000375835 KRTAP13-1Q8IUC0 172 aa10□□□□□ -0.81
SHC3-202ENST00000375835 Q6ZRN7 208 aaPredicted RBP10□□□□□ -0.81
SHC3-202ENST00000375835 WDFY4Q6ZS81 3184 aa9.95□□□□□ -0.82
SHC3-202ENST00000375835 NBEAQ8NFP9 2946 aa9.95□□□□□ -0.82
SHC3-202ENST00000375835 CELSR2Q9HCU4 2923 aa9.93□□□□□ -0.82
SHC3-202ENST00000375835 P0C880 135 aa9.9□□□□□ -0.82
SHC3-202ENST00000375835 PDZD2O15018 2839 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms