RNA–Protein interactions for RNA: ENST00000375437.6

SCN2A-203, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-203ENST00000375437 BAHCC1Q9P281 2608 aa3.44□□□□□ -1.86
SCN2A-203ENST00000375437 A0A087X002 238 aa3.44□□□□□ -1.86
SCN2A-203ENST00000375437 Q5VSD8 79 aa3.44□□□□□ -1.86
SCN2A-203ENST00000375437 SETXQ7Z333 2677 aaKnown RBP3.44□□□□□ -1.86
SCN2A-203ENST00000375437 Q75L30 129 aa3.43□□□□□ -1.86
SCN2A-203ENST00000375437 ROMO1P60602 79 aa3.41□□□□□ -1.86
SCN2A-203ENST00000375437 M0QZ58 72 aa3.41□□□□□ -1.86
SCN2A-203ENST00000375437 FP248Q71RG6 208 aaPredicted RBP3.41□□□□□ -1.86
SCN2A-203ENST00000375437 GIG44P09565 113 aaPredicted RBP3.41□□□□□ -1.86
SCN2A-203ENST00000375437 A0A0G2JQZ4 141 aa3.4□□□□□ -1.86
SCN2A-203ENST00000375437 Q8N9P0 234 aaPredicted RBP3.4□□□□□ -1.86
SCN2A-203ENST00000375437 CENPFP49454 3210 aa3.4□□□□□ -1.87
SCN2A-203ENST00000375437 RPL37P61927 97 aaKnown RBP3.39□□□□□ -1.87
SCN2A-203ENST00000375437 PLAC8Q9NZF1 115 aa3.39□□□□□ -1.87
SCN2A-203ENST00000375437 H3BS24 57 aa3.38□□□□□ -1.87
SCN2A-203ENST00000375437 A0A1W2PNM2 257 aa3.38□□□□□ -1.87
SCN2A-203ENST00000375437 UTP20O75691 2785 aaKnown RBP3.38□□□□□ -1.87
SCN2A-203ENST00000375437 OCR1Q9BZK8 76 aa3.38□□□□□ -1.87
SCN2A-203ENST00000375437 LINC01558Q9Y6Z2 57 aa3.37□□□□□ -1.87
SCN2A-203ENST00000375437 KRTAP10-3P60369 221 aa3.37□□□□□ -1.87
SCN2A-203ENST00000375437 ADM2Q7Z4H4 148 aa3.35□□□□□ -1.87
SCN2A-203ENST00000375437 NIPBLQ6KC79 2804 aaeCLIP3.34□□□□□ -1.88
SCN2A-203ENST00000375437 Q5W150 140 aa3.34□□□□□ -1.88
SCN2A-203ENST00000375437 APCP25054 2843 aa3.33□□□□□ -1.88
SCN2A-203ENST00000375437 C20orf166-AS1Q96NR2 134 aa3.32□□□□□ -1.88
SCN2A-203ENST00000375437 LCE6AA0A183 80 aa3.32□□□□□ -1.88
SCN2A-203ENST00000375437 ITPR1Q14643 2758 aa3.32□□□□□ -1.88
SCN2A-203ENST00000375437 IGSF10Q6WRI0 2623 aa3.31□□□□□ -1.88
SCN2A-203ENST00000375437 A0A096LNT2 108 aa3.3□□□□□ -1.88
SCN2A-203ENST00000375437 MMP24-AS1A0A0U1RRL7 71 aa3.3□□□□□ -1.88
SCN2A-203ENST00000375437 SPRR1BP22528 89 aa3.29□□□□□ -1.88
SCN2A-203ENST00000375437 EP400Q96L91 3159 aa3.29□□□□□ -1.88
SCN2A-203ENST00000375437 KRTAP16-1A8MUX0 517 aa3.28□□□□□ -1.88
SCN2A-203ENST00000375437 FLNCQ14315 2725 aa3.28□□□□□ -1.88
SCN2A-203ENST00000375437 SPATA8Q6RVD6 105 aa3.27□□□□□ -1.89
SCN2A-203ENST00000375437 UBR5O95071 2799 aaPredicted RBP3.27□□□□□ -1.89
SCN2A-203ENST00000375437 PANO1I0J062 215 aa3.27□□□□□ -1.89
SCN2A-203ENST00000375437 TRANK1O15050 2925 aa3.27□□□□□ -1.89
SCN2A-203ENST00000375437 SRCAPQ6ZRS2 3230 aa3.26□□□□□ -1.89
SCN2A-203ENST00000375437 SPRR1AP35321 89 aa3.26□□□□□ -1.89
SCN2A-203ENST00000375437 Q8NDZ9 215 aa3.26□□□□□ -1.89
SCN2A-203ENST00000375437 A8MUU9 505 aa3.25□□□□□ -1.89
SCN2A-203ENST00000375437 LINC00472Q9H8W2 130 aa3.25□□□□□ -1.89
SCN2A-203ENST00000375437 KRTAP1-3Q8IUG1 177 aa3.24□□□□□ -1.89
SCN2A-203ENST00000375437 TNP1P09430 55 aa3.24□□□□□ -1.89
SCN2A-203ENST00000375437 RPS29P62273 56 aaKnown RBP3.23□□□□□ -1.89
SCN2A-203ENST00000375437 Q5VV11 94 aa3.23□□□□□ -1.89
SCN2A-203ENST00000375437 PRAC1Q96KF2 57 aa3.22□□□□□ -1.89
SCN2A-203ENST00000375437 Q5XG85 94 aa3.22□□□□□ -1.89
SCN2A-203ENST00000375437 Q6ZR54 194 aa3.22□□□□□ -1.89
SCN2A-203ENST00000375437 CEP350Q5VT06 3117 aa3.22□□□□□ -1.89
SCN2A-203ENST00000375437 P0C880 135 aa3.21□□□□□ -1.9
SCN2A-203ENST00000375437 KRTAP1-1Q07627 177 aa3.21□□□□□ -1.9
SCN2A-203ENST00000375437 KRTAP10-1P60331 282 aa3.21□□□□□ -1.9
SCN2A-203ENST00000375437 NBEAL2Q6ZNJ1 2754 aa3.21□□□□□ -1.9
SCN2A-203ENST00000375437 HIVEP1P15822 2718 aa3.2□□□□□ -1.9
SCN2A-203ENST00000375437 C5orf42Q9H799 3197 aa3.2□□□□□ -1.9
SCN2A-203ENST00000375437 KRTAP26-1Q6PEX3 210 aa3.19□□□□□ -1.9
SCN2A-203ENST00000375437 PRO2289Q9P1D8 64 aa3.17□□□□□ -1.9
SCN2A-203ENST00000375437 DSPP15924 2871 aaKnown RBP3.17□□□□□ -1.9
SCN2A-203ENST00000375437 KRTAP10-2P60368 255 aa3.17□□□□□ -1.9
SCN2A-203ENST00000375437 TENM3Q9P273 2699 aa3.16□□□□□ -1.9
SCN2A-203ENST00000375437 KALRNO60229 2985 aa3.16□□□□□ -1.9
SCN2A-203ENST00000375437 PP632Q6XCG6 107 aa3.15□□□□□ -1.9
SCN2A-203ENST00000375437 C10orf95Q9H7T3 257 aa3.15□□□□□ -1.9
SCN2A-203ENST00000375437 DNAH12Q6ZR08 3092 aa3.14□□□□□ -1.91
SCN2A-203ENST00000375437 KRTAP25-1Q3LHN0 102 aa3.13□□□□□ -1.91
SCN2A-203ENST00000375437 TENM1Q9UKZ4 2725 aa3.13□□□□□ -1.91
SCN2A-203ENST00000375437 CHD9Q3L8U1 2897 aa3.13□□□□□ -1.91
SCN2A-203ENST00000375437 NOTCH2NLQ7Z3S9 236 aa3.13□□□□□ -1.91
SCN2A-203ENST00000375437 NF1P21359 2839 aa3.11□□□□□ -1.91
SCN2A-203ENST00000375437 KRTAP10-8P60410 259 aa3.1□□□□□ -1.91
SCN2A-203ENST00000375437 A0A0C4DFX4 3053 aa3.09□□□□□ -1.91
SCN2A-203ENST00000375437 KRTAP1-5Q9BYS1 174 aa3.09□□□□□ -1.91
SCN2A-203ENST00000375437 KRTAP29-1A8MX34 341 aaPredicted RBP3.09□□□□□ -1.92
SCN2A-203ENST00000375437 PCNTO95613 3336 aa3.08□□□□□ -1.92
SCN2A-203ENST00000375437 KRTAP4-16G5E9R7 235 aaPredicted RBP3.08□□□□□ -1.92
SCN2A-203ENST00000375437 LRBAP50851 2863 aa3.06□□□□□ -1.92
SCN2A-203ENST00000375437 GOLGB1Q14789 3259 aaKnown RBP3.06□□□□□ -1.92
SCN2A-203ENST00000375437 FRYLO94915 3013 aa3.06□□□□□ -1.92
SCN2A-203ENST00000375437 NDUFAF8A1L188 74 aa3.06□□□□□ -1.92
SCN2A-203ENST00000375437 A6NN06 94 aa3.05□□□□□ -1.92
SCN2A-203ENST00000375437 KRTAP21-3Q3LHN1 58 aa3.05□□□□□ -1.92
SCN2A-203ENST00000375437 CFAP54Q96N23 3096 aa3.05□□□□□ -1.92
SCN2A-203ENST00000375437 Q6ZRN7 208 aaPredicted RBP3.04□□□□□ -1.92
SCN2A-203ENST00000375437 LAMA2P24043 3122 aaKnown RBP3.04□□□□□ -1.92
SCN2A-203ENST00000375437 A8MU10 97 aa3.03□□□□□ -1.93
SCN2A-203ENST00000375437 CHD7Q9P2D1 2997 aa3.02□□□□□ -1.93
SCN2A-203ENST00000375437 UTRNP46939 3433 aa3.02□□□□□ -1.93
SCN2A-203ENST00000375437 WDFY4Q6ZS81 3184 aa3□□□□□ -1.93
SCN2A-203ENST00000375437 KRTAP10-10P60014 251 aa3□□□□□ -1.93
SCN2A-203ENST00000375437 CRYBG3Q68DQ2 2970 aa3□□□□□ -1.93
SCN2A-203ENST00000375437 CELSR2Q9HCU4 2923 aa3□□□□□ -1.93
SCN2A-203ENST00000375437 MGAQ8IWI9 3026 aa3□□□□□ -1.93
SCN2A-203ENST00000375437 PDZD2O15018 2839 aa2.99□□□□□ -1.93
SCN2A-203ENST00000375437 TGP01266 2768 aa2.99□□□□□ -1.93
SCN2A-203ENST00000375437 CYSTM1Q9H1C7 97 aa2.98□□□□□ -1.93
SCN2A-203ENST00000375437 REV3LO60673 3130 aa2.97□□□□□ -1.93
SCN2A-203ENST00000375437 ZANQ9Y493 2812 aa2.97□□□□□ -1.93
SCN2A-203ENST00000375437 KRTAP11-1Q8IUC1 163 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms