RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 A0A087X002 238 aa3.72□□□□□ -1.81
SCN2A-202ENST00000375427 A6NN06 94 aa3.72□□□□□ -1.81
SCN2A-202ENST00000375427 CHD9Q3L8U1 2897 aa3.72□□□□□ -1.81
SCN2A-202ENST00000375427 CASC10Q5T4H9 136 aa3.71□□□□□ -1.82
SCN2A-202ENST00000375427 Q6ZPA2 131 aa3.69□□□□□ -1.82
SCN2A-202ENST00000375427 Q5W150 140 aa3.68□□□□□ -1.82
SCN2A-202ENST00000375427 A0A1W2PPR1 153 aa3.68□□□□□ -1.82
SCN2A-202ENST00000375427 TNP1P09430 55 aa3.68□□□□□ -1.82
SCN2A-202ENST00000375427 CNBPP62633 177 aaKnown RBP3.68□□□□□ -1.82
SCN2A-202ENST00000375427 COL4A5P29400 1685 aa3.67□□□□□ -1.82
SCN2A-202ENST00000375427 MMP24-AS1A0A0U1RRL7 71 aa3.67□□□□□ -1.82
SCN2A-202ENST00000375427 ANAPC11Q9NYG5 84 aa3.66□□□□□ -1.82
SCN2A-202ENST00000375427 PANO1I0J062 215 aa3.66□□□□□ -1.82
SCN2A-202ENST00000375427 U3KQA8 63 aa3.66□□□□□ -1.82
SCN2A-202ENST00000375427 ZNF292O60281 2723 aa3.65□□□□□ -1.82
SCN2A-202ENST00000375427 A8MUU9 505 aa3.65□□□□□ -1.83
SCN2A-202ENST00000375427 CRIP3Q6Q6R5 217 aa3.64□□□□□ -1.83
SCN2A-202ENST00000375427 TENM3Q9P273 2699 aa3.64□□□□□ -1.83
SCN2A-202ENST00000375427 COL4A1P02462 1669 aa3.64□□□□□ -1.83
SCN2A-202ENST00000375427 WISP2O76076 250 aa3.63□□□□□ -1.83
SCN2A-202ENST00000375427 NOTCH2NLQ7Z3S9 236 aa3.63□□□□□ -1.83
SCN2A-202ENST00000375427 UBR5O95071 2799 aaPredicted RBP3.62□□□□□ -1.83
SCN2A-202ENST00000375427 WWC2-AS2Q96NR7 200 aa3.61□□□□□ -1.83
SCN2A-202ENST00000375427 LINC00612Q8N6U2 182 aa3.61□□□□□ -1.83
SCN2A-202ENST00000375427 CYSTM1Q9H1C7 97 aa3.6□□□□□ -1.83
SCN2A-202ENST00000375427 KMT2BQ9UMN6 2715 aaPredicted RBP3.6□□□□□ -1.83
SCN2A-202ENST00000375427 SMR3BP02814 79 aaPredicted RBP3.6□□□□□ -1.83
SCN2A-202ENST00000375427 A0A087WTM6 91 aa3.59□□□□□ -1.83
SCN2A-202ENST00000375427 SETXQ7Z333 2677 aaKnown RBP3.59□□□□□ -1.84
SCN2A-202ENST00000375427 FLNAP21333 2647 aaKnown RBP3.58□□□□□ -1.84
SCN2A-202ENST00000375427 OXTP01178 125 aa3.58□□□□□ -1.84
SCN2A-202ENST00000375427 KRTAP11-1Q8IUC1 163 aa3.57□□□□□ -1.84
SCN2A-202ENST00000375427 SPRR1BP22528 89 aa3.57□□□□□ -1.84
SCN2A-202ENST00000375427 COL4A4P53420 1690 aaPredicted RBP3.57□□□□□ -1.84
SCN2A-202ENST00000375427 C10orf142B7Z368 130 aa3.57□□□□□ -1.84
SCN2A-202ENST00000375427 APCP25054 2843 aa3.56□□□□□ -1.84
SCN2A-202ENST00000375427 TEX15Q9BXT5 2789 aa3.56□□□□□ -1.84
SCN2A-202ENST00000375427 TRIOO75962 3097 aa3.56□□□□□ -1.84
SCN2A-202ENST00000375427 KRTAP26-1Q6PEX3 210 aa3.55□□□□□ -1.84
SCN2A-202ENST00000375427 HIVEP1P15822 2718 aa3.55□□□□□ -1.84
SCN2A-202ENST00000375427 KRTAP4-16G5E9R7 235 aaPredicted RBP3.55□□□□□ -1.84
SCN2A-202ENST00000375427 Q5VSD8 79 aa3.54□□□□□ -1.84
SCN2A-202ENST00000375427 LINC00472Q9H8W2 130 aa3.53□□□□□ -1.84
SCN2A-202ENST00000375427 SRRM2Q9UQ35 2752 aaKnown RBP3.52□□□□□ -1.85
SCN2A-202ENST00000375427 DSPP15924 2871 aaKnown RBP3.52□□□□□ -1.85
SCN2A-202ENST00000375427 GIG44P09565 113 aaPredicted RBP3.52□□□□□ -1.85
SCN2A-202ENST00000375427 SMR3AQ99954 134 aa3.51□□□□□ -1.85
SCN2A-202ENST00000375427 COL4A2P08572 1712 aa3.51□□□□□ -1.85
SCN2A-202ENST00000375427 SRCAPQ6ZRS2 3230 aa3.51□□□□□ -1.85
SCN2A-202ENST00000375427 A8MU10 97 aa3.5□□□□□ -1.85
SCN2A-202ENST00000375427 COL4A3Q01955 1670 aa3.48□□□□□ -1.85
SCN2A-202ENST00000375427 A0A096LNT2 108 aa3.47□□□□□ -1.85
SCN2A-202ENST00000375427 MAP1AP78559 2803 aaPredicted RBP3.47□□□□□ -1.85
SCN2A-202ENST00000375427 KRTAP23-1A1A580 65 aa3.46□□□□□ -1.85
SCN2A-202ENST00000375427 ITPR1Q14643 2758 aa3.44□□□□□ -1.86
SCN2A-202ENST00000375427 INE1O15225 51 aa3.42□□□□□ -1.86
SCN2A-202ENST00000375427 SPRR1AP35321 89 aa3.42□□□□□ -1.86
SCN2A-202ENST00000375427 LRBAP50851 2863 aa3.41□□□□□ -1.86
SCN2A-202ENST00000375427 PRO2289Q9P1D8 64 aa3.39□□□□□ -1.87
SCN2A-202ENST00000375427 CENPFP49454 3210 aa3.38□□□□□ -1.87
SCN2A-202ENST00000375427 K7EIL1 84 aa3.38□□□□□ -1.87
SCN2A-202ENST00000375427 PLAC8Q9NZF1 115 aa3.38□□□□□ -1.87
SCN2A-202ENST00000375427 DNAH12Q6ZR08 3092 aa3.38□□□□□ -1.87
SCN2A-202ENST00000375427 KRTAP10-8P60410 259 aa3.37□□□□□ -1.87
SCN2A-202ENST00000375427 C5orf42Q9H799 3197 aa3.37□□□□□ -1.87
SCN2A-202ENST00000375427 CHD7Q9P2D1 2997 aa3.35□□□□□ -1.87
SCN2A-202ENST00000375427 KRTAP29-1A8MX34 341 aaPredicted RBP3.34□□□□□ -1.88
SCN2A-202ENST00000375427 CRYBG3Q68DQ2 2970 aa3.34□□□□□ -1.88
SCN2A-202ENST00000375427 NBEAL2Q6ZNJ1 2754 aa3.33□□□□□ -1.88
SCN2A-202ENST00000375427 TENM1Q9UKZ4 2725 aa3.32□□□□□ -1.88
SCN2A-202ENST00000375427 KRTAP10-9P60411 292 aa3.31□□□□□ -1.88
SCN2A-202ENST00000375427 TRANK1O15050 2925 aa3.29□□□□□ -1.88
SCN2A-202ENST00000375427 LCE6AA0A183 80 aa3.29□□□□□ -1.88
SCN2A-202ENST00000375427 RPS29P62273 56 aaKnown RBP3.29□□□□□ -1.88
SCN2A-202ENST00000375427 CEP350Q5VT06 3117 aa3.28□□□□□ -1.88
SCN2A-202ENST00000375427 KALRNO60229 2985 aa3.28□□□□□ -1.88
SCN2A-202ENST00000375427 PDZD2O15018 2839 aa3.28□□□□□ -1.88
SCN2A-202ENST00000375427 KRTAP10-11P60412 298 aa3.28□□□□□ -1.88
SCN2A-202ENST00000375427 PCNTO95613 3336 aa3.26□□□□□ -1.89
SCN2A-202ENST00000375427 TGP01266 2768 aa3.26□□□□□ -1.89
SCN2A-202ENST00000375427 Q6ZRN7 208 aaPredicted RBP3.25□□□□□ -1.89
SCN2A-202ENST00000375427 TENM2Q9NT68 2774 aa3.25□□□□□ -1.89
SCN2A-202ENST00000375427 H0YAA0 97 aa3.24□□□□□ -1.89
SCN2A-202ENST00000375427 NF1P21359 2839 aa3.24□□□□□ -1.89
SCN2A-202ENST00000375427 CELSR2Q9HCU4 2923 aa3.23□□□□□ -1.89
SCN2A-202ENST00000375427 FLNCQ14315 2725 aa3.22□□□□□ -1.89
SCN2A-202ENST00000375427 EP400Q96L91 3159 aa3.22□□□□□ -1.89
SCN2A-202ENST00000375427 A0A0C4DFX4 3053 aa3.22□□□□□ -1.89
SCN2A-202ENST00000375427 KRTAP12-2P59991 146 aa3.21□□□□□ -1.9
SCN2A-202ENST00000375427 TNRC18O15417 2968 aaPredicted RBP3.19□□□□□ -1.9
SCN2A-202ENST00000375427 LAMA2P24043 3122 aaKnown RBP3.19□□□□□ -1.9
SCN2A-202ENST00000375427 NIPBLQ6KC79 2804 aaeCLIP3.18□□□□□ -1.9
SCN2A-202ENST00000375427 MEGF8Q7Z7M0 2845 aa3.17□□□□□ -1.9
SCN2A-202ENST00000375427 KRTAP13-2Q52LG2 175 aa3.17□□□□□ -1.9
SCN2A-202ENST00000375427 FRYLO94915 3013 aa3.14□□□□□ -1.91
SCN2A-202ENST00000375427 ASH1LQ9NR48 2969 aaKnown RBP3.14□□□□□ -1.91
SCN2A-202ENST00000375427 OTOGQ6ZRI0 2925 aa3.14□□□□□ -1.91
SCN2A-202ENST00000375427 MGAQ8IWI9 3026 aa3.13□□□□□ -1.91
SCN2A-202ENST00000375427 CFAP54Q96N23 3096 aa3.13□□□□□ -1.91
SCN2A-202ENST00000375427 COL12A1Q99715 3063 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms