RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 LINC00472Q9H8W2 130 aa6.79□□□□□ -1.32
LCN2-202ENST00000372998 NUPR2A6NF83 97 aa6.78□□□□□ -1.32
LCN2-202ENST00000372998 H0Y9P7 68 aa6.78□□□□□ -1.32
LCN2-202ENST00000372998 C1orf195Q5TG92 126 aa6.78□□□□□ -1.32
LCN2-202ENST00000372998 WFDC13Q8IUB5 93 aa6.78□□□□□ -1.32
LCN2-202ENST00000372998 MPLKIPQ8TAP9 179 aa6.78□□□□□ -1.32
LCN2-202ENST00000372998 MOBPQ13875 183 aa6.77□□□□□ -1.33
LCN2-202ENST00000372998 BRK1Q8WUW1 75 aa6.77□□□□□ -1.33
LCN2-202ENST00000372998 LINC00208Q96KT6 92 aa6.77□□□□□ -1.33
LCN2-202ENST00000372998 FAM229BQ4G0N7 80 aa6.76□□□□□ -1.33
LCN2-202ENST00000372998 PHF5AQ7RTV0 110 aaKnown RBP6.76□□□□□ -1.33
LCN2-202ENST00000372998 HIVEP1P15822 2718 aa6.76□□□□□ -1.33
LCN2-202ENST00000372998 HELZ2Q9BYK8 2649 aaKnown RBP6.75□□□□□ -1.33
LCN2-202ENST00000372998 NBDYA0A0U1RRE5 68 aa6.74□□□□□ -1.33
LCN2-202ENST00000372998 LCE2DQ5TA82 110 aaPredicted RBP6.74□□□□□ -1.33
LCN2-202ENST00000372998 LIMD2Q9BT23 127 aa6.74□□□□□ -1.33
LCN2-202ENST00000372998 KRTAP1-5Q9BYS1 174 aa6.74□□□□□ -1.33
LCN2-202ENST00000372998 VWFP04275 2813 aa6.74□□□□□ -1.33
LCN2-202ENST00000372998 ATRQ13535 2644 aa6.74□□□□□ -1.33
LCN2-202ENST00000372998 LRCOL1A6NCL2 159 aa6.73□□□□□ -1.33
LCN2-202ENST00000372998 KRTAP13-1Q8IUC0 172 aa6.73□□□□□ -1.33
LCN2-202ENST00000372998 CDK2AP2O75956 126 aa6.72□□□□□ -1.33
LCN2-202ENST00000372998 LINC00483Q53H64 154 aa6.72□□□□□ -1.33
LCN2-202ENST00000372998 PRB2P02812 416 aaPredicted RBP6.7□□□□□ -1.34
LCN2-202ENST00000372998 DEFB116Q30KQ4 102 aa6.7□□□□□ -1.34
LCN2-202ENST00000372998 OTOGQ6ZRI0 2925 aa6.7□□□□□ -1.34
LCN2-202ENST00000372998 MMP24-AS1A0A0U1RRL7 71 aa6.69□□□□□ -1.34
LCN2-202ENST00000372998 CHTF8P0CG12 524 aa6.69□□□□□ -1.34
LCN2-202ENST00000372998 IGLV7-46A0A075B6I9 117 aa6.68□□□□□ -1.34
LCN2-202ENST00000372998 ASB16-AS1Q495Z4 193 aa6.68□□□□□ -1.34
LCN2-202ENST00000372998 SPACA4Q8TDM5 124 aa6.68□□□□□ -1.34
LCN2-202ENST00000372998 TENM1Q9UKZ4 2725 aa6.68□□□□□ -1.34
LCN2-202ENST00000372998 DNAH3Q8TD57 4116 aa6.66□□□□□ -1.34
LCN2-202ENST00000372998 A0A0G2JQZ4 141 aa6.66□□□□□ -1.34
LCN2-202ENST00000372998 Q6ZR54 194 aa6.65□□□□□ -1.34
LCN2-202ENST00000372998 Q6ZRN7 208 aaPredicted RBP6.65□□□□□ -1.34
LCN2-202ENST00000372998 MDFIQ99750 246 aa6.65□□□□□ -1.34
LCN2-202ENST00000372998 C8orf17Q9NRJ1 99 aa6.65□□□□□ -1.34
LCN2-202ENST00000372998 DNAH1Q9P2D7 4330 aa6.64□□□□□ -1.35
LCN2-202ENST00000372998 A0A1B0GVX0 72 aa6.64□□□□□ -1.35
LCN2-202ENST00000372998 KRTAP11-1Q8IUC1 163 aa6.64□□□□□ -1.35
LCN2-202ENST00000372998 CD164Q04900 197 aa6.62□□□□□ -1.35
LCN2-202ENST00000372998 MRPL34Q9BQ48 92 aaKnown RBP6.62□□□□□ -1.35
LCN2-202ENST00000372998 A0A087WTM6 91 aa6.61□□□□□ -1.35
LCN2-202ENST00000372998 IGLV5-52A0A0A0MRZ9 124 aa6.61□□□□□ -1.35
LCN2-202ENST00000372998 IGLV9-49A0A0B4J1Y8 123 aa6.61□□□□□ -1.35
LCN2-202ENST00000372998 ZNF861PO60384 105 aa6.61□□□□□ -1.35
LCN2-202ENST00000372998 PRR4Q16378 134 aa6.61□□□□□ -1.35
LCN2-202ENST00000372998 Q96NJ1 140 aa6.61□□□□□ -1.35
LCN2-202ENST00000372998 PLAC8Q9NZF1 115 aa6.61□□□□□ -1.35
LCN2-202ENST00000372998 HECTD1Q9ULT8 2610 aa6.59□□□□□ -1.35
LCN2-202ENST00000372998 LOC101927531A0A1B0GV80 90 aa6.59□□□□□ -1.35
LCN2-202ENST00000372998 C8orf87E5RJ46 101 aa6.59□□□□□ -1.35
LCN2-202ENST00000372998 Q8N9P0 234 aaPredicted RBP6.59□□□□□ -1.35
LCN2-202ENST00000372998 PSPHP1O15172 72 aa6.58□□□□□ -1.36
LCN2-202ENST00000372998 COA5Q86WW8 74 aa6.58□□□□□ -1.36
LCN2-202ENST00000372998 WWC2-AS2Q96NR7 200 aa6.58□□□□□ -1.36
LCN2-202ENST00000372998 F8P00451 2351 aa6.58□□□□□ -1.36
LCN2-202ENST00000372998 CMYA5Q8N3K9 4069 aa6.57□□□□□ -1.36
LCN2-202ENST00000372998 RTL8CO15255 209 aa6.57□□□□□ -1.36
LCN2-202ENST00000372998 SSBP3-AS1Q7Z2R9 100 aa6.57□□□□□ -1.36
LCN2-202ENST00000372998 TENM3Q9P273 2699 aa6.57□□□□□ -1.36
LCN2-202ENST00000372998 A8MUN3 132 aa6.56□□□□□ -1.36
LCN2-202ENST00000372998 NDUFS5O43920 106 aa6.56□□□□□ -1.36
LCN2-202ENST00000372998 Q75L30 129 aa6.56□□□□□ -1.36
LCN2-202ENST00000372998 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.56□□□□□ -1.36
LCN2-202ENST00000372998 TRRAPQ9Y4A5 3859 aa6.55□□□□□ -1.36
LCN2-202ENST00000372998 IGHV6-1A0A0B4J1U7 121 aa6.55□□□□□ -1.36
LCN2-202ENST00000372998 PSORS1C2Q9UIG4 136 aa6.55□□□□□ -1.36
LCN2-202ENST00000372998 Q5VV11 94 aa6.54□□□□□ -1.36
LCN2-202ENST00000372998 PRR15LQ9BU68 103 aa6.54□□□□□ -1.36
LCN2-202ENST00000372998 HUWE1Q7Z6Z7 4374 aaKnown RBP6.54□□□□□ -1.36
LCN2-202ENST00000372998 CHKB-CPT1BH3BT56 60 aa6.53□□□□□ -1.36
LCN2-202ENST00000372998 PANO1I0J062 215 aa6.53□□□□□ -1.36
LCN2-202ENST00000372998 LINC01558Q9Y6Z2 57 aa6.53□□□□□ -1.36
LCN2-202ENST00000372998 PMAIP1Q13794 54 aa6.52□□□□□ -1.37
LCN2-202ENST00000372998 MAST4O15021 2626 aa6.52□□□□□ -1.37
LCN2-202ENST00000372998 IGLV7-43P04211 117 aa6.51□□□□□ -1.37
LCN2-202ENST00000372998 ANK2Q01484 3957 aa6.5□□□□□ -1.37
LCN2-202ENST00000372998 ATP11AUNQ6ZP68 121 aa6.5□□□□□ -1.37
LCN2-202ENST00000372998 PKD1L1Q8TDX9 2849 aa6.5□□□□□ -1.37
LCN2-202ENST00000372998 PCOTHQ58A44 107 aa6.49□□□□□ -1.37
LCN2-202ENST00000372998 C1orf134Q5TEV5 83 aa6.49□□□□□ -1.37
LCN2-202ENST00000372998 FLNBO75369 2602 aaKnown RBP6.47□□□□□ -1.37
LCN2-202ENST00000372998 A6NED7 52 aa6.47□□□□□ -1.37
LCN2-202ENST00000372998 ACYP2P14621 99 aa6.47□□□□□ -1.37
LCN2-202ENST00000372998 DYNC2H1Q8NCM8 4307 aaKnown RBP6.46□□□□□ -1.37
LCN2-202ENST00000372998 FAM229AH3BQW9 127 aa6.46□□□□□ -1.38
LCN2-202ENST00000372998 CDC42SE1Q9NRR8 79 aa6.46□□□□□ -1.38
LCN2-202ENST00000372998 BAHCC1Q9P281 2608 aa6.46□□□□□ -1.38
LCN2-202ENST00000372998 STAB1Q9NY15 2570 aa6.42□□□□□ -1.38
LCN2-202ENST00000372998 HRES1P13985 223 aa6.42□□□□□ -1.38
LCN2-202ENST00000372998 LINC00313P59037 77 aa6.42□□□□□ -1.38
LCN2-202ENST00000372998 CIRBP-AS1Q8TBR5 109 aa6.42□□□□□ -1.38
LCN2-202ENST00000372998 KRTAP13-3Q3SY46 172 aa6.4□□□□□ -1.38
LCN2-202ENST00000372998 SPINK6Q6UWN8 80 aa6.4□□□□□ -1.38
LCN2-202ENST00000372998 FBN1P35555 2871 aaKnown RBP6.39□□□□□ -1.39
LCN2-202ENST00000372998 SPAG11AQ6PDA7 123 aa6.39□□□□□ -1.39
LCN2-202ENST00000372998 DMAC1Q96GE9 116 aa6.37□□□□□ -1.39
LCN2-202ENST00000372998 SEC61GP60059 68 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms