RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 KRTAP25-1Q3LHN0 102 aa8.76□□□□□ -1.01
RAPGEF1-202ENST00000372190 PCNTO95613 3336 aa8.76□□□□□ -1.01
RAPGEF1-202ENST00000372190 MGAM2Q2M2H8 2515 aa8.76□□□□□ -1.01
RAPGEF1-202ENST00000372190 CFAP46Q8IYW2 2715 aa8.75□□□□□ -1.01
RAPGEF1-202ENST00000372190 S4R3F8 94 aa8.74□□□□□ -1.01
RAPGEF1-202ENST00000372190 PRRC2CQ9Y520 2896 aaKnown RBP8.73□□□□□ -1.01
RAPGEF1-202ENST00000372190 MMP24-AS1A0A0U1RRL7 71 aa8.72□□□□□ -1.01
RAPGEF1-202ENST00000372190 A6NN06 94 aa8.72□□□□□ -1.01
RAPGEF1-202ENST00000372190 PLAC4Q8WY50 150 aa8.72□□□□□ -1.01
RAPGEF1-202ENST00000372190 RANBP2P49792 3224 aaKnown RBP8.71□□□□□ -1.01
RAPGEF1-202ENST00000372190 LCE6AA0A183 80 aa8.71□□□□□ -1.01
RAPGEF1-202ENST00000372190 USP24Q9UPU5 2620 aa8.69□□□□□ -1.02
RAPGEF1-202ENST00000372190 R4GN34 69 aa8.69□□□□□ -1.02
RAPGEF1-202ENST00000372190 TRANK1O15050 2925 aa8.68□□□□□ -1.02
RAPGEF1-202ENST00000372190 Q6ZSA8 131 aa8.68□□□□□ -1.02
RAPGEF1-202ENST00000372190 ZCCHC13Q8WW36 166 aaKnown RBP8.67□□□□□ -1.02
RAPGEF1-202ENST00000372190 MKI67P46013 3256 aaKnown RBP8.65□□□□□ -1.02
RAPGEF1-202ENST00000372190 Q5W150 140 aa8.64□□□□□ -1.03
RAPGEF1-202ENST00000372190 SPATA8Q6RVD6 105 aa8.63□□□□□ -1.03
RAPGEF1-202ENST00000372190 LAMA3Q16787 3333 aa8.63□□□□□ -1.03
RAPGEF1-202ENST00000372190 ZNF292O60281 2723 aa8.62□□□□□ -1.03
RAPGEF1-202ENST00000372190 MAST4O15021 2626 aa8.61□□□□□ -1.03
RAPGEF1-202ENST00000372190 C20orf166-AS1Q96NR2 134 aa8.6□□□□□ -1.03
RAPGEF1-202ENST00000372190 ATRQ13535 2644 aa8.6□□□□□ -1.03
RAPGEF1-202ENST00000372190 PLAC8Q9NZF1 115 aa8.58□□□□□ -1.04
RAPGEF1-202ENST00000372190 Q5VSD8 79 aa8.57□□□□□ -1.04
RAPGEF1-202ENST00000372190 BAHCC1Q9P281 2608 aa8.56□□□□□ -1.04
RAPGEF1-202ENST00000372190 BPTFQ12830 3046 aa8.54□□□□□ -1.04
RAPGEF1-202ENST00000372190 AKAP13Q12802 2813 aa8.5□□□□□ -1.05
RAPGEF1-202ENST00000372190 M0QZ58 72 aa8.5□□□□□ -1.05
RAPGEF1-202ENST00000372190 BRCA2P51587 3418 aa8.5□□□□□ -1.05
RAPGEF1-202ENST00000372190 KRTAP1-5Q9BYS1 174 aa8.49□□□□□ -1.05
RAPGEF1-202ENST00000372190 KRTAP21-3Q3LHN1 58 aa8.49□□□□□ -1.05
RAPGEF1-202ENST00000372190 MGAQ8IWI9 3026 aa8.48□□□□□ -1.05
RAPGEF1-202ENST00000372190 M0R2T5 61 aa8.47□□□□□ -1.05
RAPGEF1-202ENST00000372190 Q8NDZ9 215 aa8.47□□□□□ -1.05
RAPGEF1-202ENST00000372190 LINC00472Q9H8W2 130 aa8.46□□□□□ -1.05
RAPGEF1-202ENST00000372190 KRTAP10-1P60331 282 aa8.46□□□□□ -1.05
RAPGEF1-202ENST00000372190 ADM2Q7Z4H4 148 aa8.46□□□□□ -1.06
RAPGEF1-202ENST00000372190 A0A087X002 238 aa8.46□□□□□ -1.06
RAPGEF1-202ENST00000372190 KRTAP10-2P60368 255 aa8.46□□□□□ -1.06
RAPGEF1-202ENST00000372190 PRUNE2Q8WUY3 3088 aa8.42□□□□□ -1.06
RAPGEF1-202ENST00000372190 IGSF10Q6WRI0 2623 aa8.42□□□□□ -1.06
RAPGEF1-202ENST00000372190 TEP1Q99973 2627 aaKnown RBP8.41□□□□□ -1.06
RAPGEF1-202ENST00000372190 SPRR1AP35321 89 aa8.41□□□□□ -1.06
RAPGEF1-202ENST00000372190 CENPEQ02224 2701 aa8.41□□□□□ -1.06
RAPGEF1-202ENST00000372190 Q6ZR54 194 aa8.39□□□□□ -1.07
RAPGEF1-202ENST00000372190 PANO1I0J062 215 aa8.37□□□□□ -1.07
RAPGEF1-202ENST00000372190 UNC79Q9P2D8 2635 aa8.34□□□□□ -1.07
RAPGEF1-202ENST00000372190 FLG2Q5D862 2391 aaPredicted RBP8.32□□□□□ -1.08
RAPGEF1-202ENST00000372190 SPRR1BP22528 89 aa8.32□□□□□ -1.08
RAPGEF1-202ENST00000372190 TEX15Q9BXT5 2789 aa8.31□□□□□ -1.08
RAPGEF1-202ENST00000372190 KRTAP26-1Q6PEX3 210 aa8.31□□□□□ -1.08
RAPGEF1-202ENST00000372190 DSPP15924 2871 aaKnown RBP8.31□□□□□ -1.08
RAPGEF1-202ENST00000372190 A8MUU9 505 aa8.3□□□□□ -1.08
RAPGEF1-202ENST00000372190 CDH23Q9H251 3354 aa8.3□□□□□ -1.08
RAPGEF1-202ENST00000372190 WDFY4Q6ZS81 3184 aa8.29□□□□□ -1.08
RAPGEF1-202ENST00000372190 SETXQ7Z333 2677 aaKnown RBP8.28□□□□□ -1.08
RAPGEF1-202ENST00000372190 C10orf95Q9H7T3 257 aa8.28□□□□□ -1.08
RAPGEF1-202ENST00000372190 COL6A5A8TX70 2615 aa8.26□□□□□ -1.09
RAPGEF1-202ENST00000372190 A8MU10 97 aa8.25□□□□□ -1.09
RAPGEF1-202ENST00000372190 UNC80Q8N2C7 3258 aa8.22□□□□□ -1.09
RAPGEF1-202ENST00000372190 KRTAP29-1A8MX34 341 aaPredicted RBP8.22□□□□□ -1.09
RAPGEF1-202ENST00000372190 KRTAP11-1Q8IUC1 163 aa8.19□□□□□ -1.1
RAPGEF1-202ENST00000372190 XIRP2A4UGR9 3374 aa8.19□□□□□ -1.1
RAPGEF1-202ENST00000372190 TNRC18O15417 2968 aaPredicted RBP8.17□□□□□ -1.1
RAPGEF1-202ENST00000372190 PP632Q6XCG6 107 aa8.17□□□□□ -1.1
RAPGEF1-202ENST00000372190 CFAP54Q96N23 3096 aa8.16□□□□□ -1.1
RAPGEF1-202ENST00000372190 GCN1Q92616 2671 aaKnown RBP8.16□□□□□ -1.1
RAPGEF1-202ENST00000372190 STAB1Q9NY15 2570 aa8.16□□□□□ -1.1
RAPGEF1-202ENST00000372190 A0A0C4DFX4 3053 aa8.15□□□□□ -1.11
RAPGEF1-202ENST00000372190 SZT2Q5T011 3432 aa8.15□□□□□ -1.11
RAPGEF1-202ENST00000372190 Q6ZRN7 208 aaPredicted RBP8.1□□□□□ -1.11
RAPGEF1-202ENST00000372190 CHD6Q8TD26 2715 aa8.1□□□□□ -1.11
RAPGEF1-202ENST00000372190 LAMA2P24043 3122 aaKnown RBP8.1□□□□□ -1.11
RAPGEF1-202ENST00000372190 KRTAP4-16G5E9R7 235 aaPredicted RBP8.09□□□□□ -1.11
RAPGEF1-202ENST00000372190 TRIOO75962 3097 aa8.08□□□□□ -1.12
RAPGEF1-202ENST00000372190 ITPR2Q14571 2701 aa8.08□□□□□ -1.12
RAPGEF1-202ENST00000372190 TNP1P09430 55 aa8.06□□□□□ -1.12
RAPGEF1-202ENST00000372190 NOTCH1P46531 2555 aa7.99□□□□□ -1.13
RAPGEF1-202ENST00000372190 COL6A3P12111 3177 aa7.98□□□□□ -1.13
RAPGEF1-202ENST00000372190 VPS13AQ96RL7 3174 aa7.98□□□□□ -1.13
RAPGEF1-202ENST00000372190 KMT2BQ9UMN6 2715 aaPredicted RBP7.97□□□□□ -1.13
RAPGEF1-202ENST00000372190 P0C880 135 aa7.95□□□□□ -1.14
RAPGEF1-202ENST00000372190 SPTBN5Q9NRC6 3674 aaKnown RBP7.91□□□□□ -1.14
RAPGEF1-202ENST00000372190 UBR5O95071 2799 aaPredicted RBP7.91□□□□□ -1.14
RAPGEF1-202ENST00000372190 HIVEP1P15822 2718 aa7.9□□□□□ -1.15
RAPGEF1-202ENST00000372190 NOTCH2NLQ7Z3S9 236 aa7.89□□□□□ -1.15
RAPGEF1-202ENST00000372190 FRYQ5TBA9 3013 aa7.89□□□□□ -1.15
RAPGEF1-202ENST00000372190 RPS29P62273 56 aaKnown RBP7.89□□□□□ -1.15
RAPGEF1-202ENST00000372190 CELSR3Q9NYQ7 3312 aa7.89□□□□□ -1.15
RAPGEF1-202ENST00000372190 NBEAL1Q6ZS30 2694 aa7.87□□□□□ -1.15
RAPGEF1-202ENST00000372190 ITPR1Q14643 2758 aa7.87□□□□□ -1.15
RAPGEF1-202ENST00000372190 FRYLO94915 3013 aa7.86□□□□□ -1.15
RAPGEF1-202ENST00000372190 EYSQ5T1H1 3165 aa7.86□□□□□ -1.15
RAPGEF1-202ENST00000372190 ATMQ13315 3056 aa7.85□□□□□ -1.15
RAPGEF1-202ENST00000372190 UTP20O75691 2785 aaKnown RBP7.85□□□□□ -1.15
RAPGEF1-202ENST00000372190 NSD1Q96L73 2696 aaPredicted RBP7.85□□□□□ -1.15
RAPGEF1-202ENST00000372190 FLNCQ14315 2725 aa7.85□□□□□ -1.15
RAPGEF1-202ENST00000372190 LAMA1P25391 3075 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms