RNA–Protein interactions for RNA: ENST00000370852.6

HMGCLL1-204, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2

Gene HMGCLL1, Length 2,445 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-204ENST00000370852 IGSF10Q6WRI0 2623 aa5.97□□□□□ -1.45
HMGCLL1-204ENST00000370852 LOC101927531A0A1B0GV80 90 aa5.97□□□□□ -1.45
HMGCLL1-204ENST00000370852 IGFL1Q6UW32 110 aa5.97□□□□□ -1.45
HMGCLL1-204ENST00000370852 C9orf163Q8N9P6 203 aa5.97□□□□□ -1.45
HMGCLL1-204ENST00000370852 TENM2Q9NT68 2774 aa5.95□□□□□ -1.46
HMGCLL1-204ENST00000370852 CNBPP62633 177 aaKnown RBP5.95□□□□□ -1.46
HMGCLL1-204ENST00000370852 SPANXA2-OT1Q8N9U9 137 aa5.95□□□□□ -1.46
HMGCLL1-204ENST00000370852 CACNA1AO00555 2505 aa5.94□□□□□ -1.46
HMGCLL1-204ENST00000370852 DHRS4-AS1Q9P1J3 65 aa5.94□□□□□ -1.46
HMGCLL1-204ENST00000370852 CASC2Q6XLA1 102 aa5.94□□□□□ -1.46
HMGCLL1-204ENST00000370852 IGLV1-50A0A075B6I6 118 aa5.93□□□□□ -1.46
HMGCLL1-204ENST00000370852 LINC00313P59037 77 aa5.93□□□□□ -1.46
HMGCLL1-204ENST00000370852 TENM1Q9UKZ4 2725 aa5.92□□□□□ -1.46
HMGCLL1-204ENST00000370852 A0A1B0GW54 56 aa5.91□□□□□ -1.46
HMGCLL1-204ENST00000370852 KRTAP10-3P60369 221 aa5.91□□□□□ -1.46
HMGCLL1-204ENST00000370852 Q8NAQ8 132 aa5.91□□□□□ -1.46
HMGCLL1-204ENST00000370852 H3BS24 57 aa5.9□□□□□ -1.46
HMGCLL1-204ENST00000370852 CASC10Q5T4H9 136 aa5.9□□□□□ -1.46
HMGCLL1-204ENST00000370852 PLAC8Q9NZF1 115 aa5.9□□□□□ -1.47
HMGCLL1-204ENST00000370852 SPRR1AP35321 89 aa5.89□□□□□ -1.47
HMGCLL1-204ENST00000370852 IGLV7-46A0A075B6I9 117 aa5.89□□□□□ -1.47
HMGCLL1-204ENST00000370852 PRLHP81277 87 aa5.89□□□□□ -1.47
HMGCLL1-204ENST00000370852 LINC01558Q9Y6Z2 57 aa5.88□□□□□ -1.47
HMGCLL1-204ENST00000370852 ZNF462Q96JM2 2506 aa5.88□□□□□ -1.47
HMGCLL1-204ENST00000370852 COL7A1Q02388 2944 aa5.88□□□□□ -1.47
HMGCLL1-204ENST00000370852 TEP1Q99973 2627 aaKnown RBP5.88□□□□□ -1.47
HMGCLL1-204ENST00000370852 IGLV5-37A0A075B6J1 123 aa5.87□□□□□ -1.47
HMGCLL1-204ENST00000370852 A0A096LNI7 61 aa5.87□□□□□ -1.47
HMGCLL1-204ENST00000370852 SPART-AS1P0CW21 52 aa5.86□□□□□ -1.47
HMGCLL1-204ENST00000370852 TENM3Q9P273 2699 aa5.86□□□□□ -1.47
HMGCLL1-204ENST00000370852 HRES1P13985 223 aa5.86□□□□□ -1.47
HMGCLL1-204ENST00000370852 KRTAP1-3Q8IUG1 177 aa5.86□□□□□ -1.47
HMGCLL1-204ENST00000370852 MDFIQ99750 246 aa5.85□□□□□ -1.47
HMGCLL1-204ENST00000370852 H0Y9J4 135 aa5.84□□□□□ -1.47
HMGCLL1-204ENST00000370852 PRR26Q8N8Z3 221 aa5.84□□□□□ -1.47
HMGCLL1-204ENST00000370852 DNAH10Q8IVF4 4471 aa5.84□□□□□ -1.48
HMGCLL1-204ENST00000370852 MMP24-AS1A0A0U1RRL7 71 aa5.83□□□□□ -1.48
HMGCLL1-204ENST00000370852 H3BPC8 53 aa5.83□□□□□ -1.48
HMGCLL1-204ENST00000370852 USP24Q9UPU5 2620 aa5.83□□□□□ -1.48
HMGCLL1-204ENST00000370852 DEFB113Q30KQ7 82 aa5.83□□□□□ -1.48
HMGCLL1-204ENST00000370852 REG3GQ6UW15 175 aa5.83□□□□□ -1.48
HMGCLL1-204ENST00000370852 A8MWP4 228 aa5.82□□□□□ -1.48
HMGCLL1-204ENST00000370852 LINC00472Q9H8W2 130 aa5.82□□□□□ -1.48
HMGCLL1-204ENST00000370852 ANK2Q01484 3957 aa5.82□□□□□ -1.48
HMGCLL1-204ENST00000370852 DNAH1Q9P2D7 4330 aa5.81□□□□□ -1.48
HMGCLL1-204ENST00000370852 K7EIL1 84 aa5.8□□□□□ -1.48
HMGCLL1-204ENST00000370852 KRTAP11-1Q8IUC1 163 aa5.8□□□□□ -1.48
HMGCLL1-204ENST00000370852 LYSTQ99698 3801 aa5.8□□□□□ -1.48
HMGCLL1-204ENST00000370852 PLA2G2DQ9UNK4 145 aa5.79□□□□□ -1.48
HMGCLL1-204ENST00000370852 LINC01554Q52M75 96 aa5.78□□□□□ -1.48
HMGCLL1-204ENST00000370852 IGKV2-24A0A0C4DH68 120 aa5.77□□□□□ -1.49
HMGCLL1-204ENST00000370852 TLX1NBP0CAT3 122 aa5.77□□□□□ -1.49
HMGCLL1-204ENST00000370852 HECTD1Q9ULT8 2610 aa5.76□□□□□ -1.49
HMGCLL1-204ENST00000370852 ALMS1Q8TCU4 4167 aa5.76□□□□□ -1.49
HMGCLL1-204ENST00000370852 IGLV8-61A0A075B6I0 122 aa5.76□□□□□ -1.49
HMGCLL1-204ENST00000370852 KRTAP1-1Q07627 177 aa5.75□□□□□ -1.49
HMGCLL1-204ENST00000370852 ITPR2Q14571 2701 aa5.74□□□□□ -1.49
HMGCLL1-204ENST00000370852 A0A087X002 238 aa5.74□□□□□ -1.49
HMGCLL1-204ENST00000370852 NOTCH2NLQ7Z3S9 236 aa5.74□□□□□ -1.49
HMGCLL1-204ENST00000370852 ATRQ13535 2644 aa5.74□□□□□ -1.49
HMGCLL1-204ENST00000370852 LINC01556Q5JQF7 62 aa5.74□□□□□ -1.49
HMGCLL1-204ENST00000370852 HELZ2Q9BYK8 2649 aaKnown RBP5.74□□□□□ -1.49
HMGCLL1-204ENST00000370852 PLA2G1BP04054 148 aaKnown RBP5.73□□□□□ -1.49
HMGCLL1-204ENST00000370852 SMR3AQ99954 134 aa5.73□□□□□ -1.49
HMGCLL1-204ENST00000370852 TENM4Q6N022 2769 aa5.72□□□□□ -1.49
HMGCLL1-204ENST00000370852 FLNBO75369 2602 aaKnown RBP5.72□□□□□ -1.49
HMGCLL1-204ENST00000370852 Q96NJ1 140 aa5.72□□□□□ -1.49
HMGCLL1-204ENST00000370852 IGHV6-1A0A0B4J1U7 121 aa5.71□□□□□ -1.5
HMGCLL1-204ENST00000370852 CSAG1Q6PB30 78 aa5.7□□□□□ -1.5
HMGCLL1-204ENST00000370852 Q6ZR54 194 aa5.7□□□□□ -1.5
HMGCLL1-204ENST00000370852 RTL8CO15255 209 aa5.7□□□□□ -1.5
HMGCLL1-204ENST00000370852 CHTF8P0CG12 524 aa5.69□□□□□ -1.5
HMGCLL1-204ENST00000370852 NOTCH2Q04721 2471 aa5.69□□□□□ -1.5
HMGCLL1-204ENST00000370852 ASB16-AS1Q495Z4 193 aa5.69□□□□□ -1.5
HMGCLL1-204ENST00000370852 C8orf17Q9NRJ1 99 aa5.69□□□□□ -1.5
HMGCLL1-204ENST00000370852 Q5W150 140 aa5.68□□□□□ -1.5
HMGCLL1-204ENST00000370852 NBEAL1Q6ZS30 2694 aa5.68□□□□□ -1.5
HMGCLL1-204ENST00000370852 DNAH9Q9NYC9 4486 aa5.67□□□□□ -1.5
HMGCLL1-204ENST00000370852 DEFB131BA0A096LNP1 70 aa5.66□□□□□ -1.5
HMGCLL1-204ENST00000370852 IGLV9-49A0A0B4J1Y8 123 aa5.66□□□□□ -1.5
HMGCLL1-204ENST00000370852 DNAH10OSP0CZ25 163 aa5.65□□□□□ -1.5
HMGCLL1-204ENST00000370852 H3BNG1 76 aa5.65□□□□□ -1.51
HMGCLL1-204ENST00000370852 TP53AIP1Q9HCN2 124 aa5.65□□□□□ -1.51
HMGCLL1-204ENST00000370852 MAST4O15021 2626 aa5.64□□□□□ -1.51
HMGCLL1-204ENST00000370852 RETNLBQ9BQ08 111 aa5.63□□□□□ -1.51
HMGCLL1-204ENST00000370852 SPRR1BP22528 89 aa5.62□□□□□ -1.51
HMGCLL1-204ENST00000370852 OXLD1Q5BKU9 147 aa5.62□□□□□ -1.51
HMGCLL1-204ENST00000370852 SPATA8Q6RVD6 105 aa5.62□□□□□ -1.51
HMGCLL1-204ENST00000370852 MRPL34Q9BQ48 92 aaKnown RBP5.62□□□□□ -1.51
HMGCLL1-204ENST00000370852 FRAS1Q86XX4 4008 aa5.61□□□□□ -1.51
HMGCLL1-204ENST00000370852 NSD1Q96L73 2696 aaPredicted RBP5.61□□□□□ -1.51
HMGCLL1-204ENST00000370852 A0A1B0GU69 56 aa5.61□□□□□ -1.51
HMGCLL1-204ENST00000370852 ANAPC11Q9NYG5 84 aa5.61□□□□□ -1.51
HMGCLL1-204ENST00000370852 COL6A5A8TX70 2615 aa5.61□□□□□ -1.51
HMGCLL1-204ENST00000370852 A0A1B0GVX0 72 aa5.6□□□□□ -1.51
HMGCLL1-204ENST00000370852 NOTCH1P46531 2555 aa5.6□□□□□ -1.51
HMGCLL1-204ENST00000370852 KRTAP10-11P60412 298 aa5.59□□□□□ -1.51
HMGCLL1-204ENST00000370852 MIR22HGQ0VDD5 57 aa5.59□□□□□ -1.51
HMGCLL1-204ENST00000370852 PANO1I0J062 215 aa5.58□□□□□ -1.52
HMGCLL1-204ENST00000370852 KRTAP13-3Q3SY46 172 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms