RNA–Protein interactions for RNA: ENST00000370138.1

LRRC39-203, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,466 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-203ENST00000370138 NBEAQ8NFP9 2946 aa2.13□□□□□ -2.07
LRRC39-203ENST00000370138 OTOGLQ3ZCN5 2332 aa2.13□□□□□ -2.07
LRRC39-203ENST00000370138 H3BUA1 57 aa2.13□□□□□ -2.07
LRRC39-203ENST00000370138 TPRXLQ17RH7 258 aa2.13□□□□□ -2.07
LRRC39-203ENST00000370138 SPINK13Q1W4C9 94 aa2.13□□□□□ -2.07
LRRC39-203ENST00000370138 BRD3OSQ6XYD6 125 aa2.13□□□□□ -2.07
LRRC39-203ENST00000370138 SPACA4Q8TDM5 124 aa2.13□□□□□ -2.07
LRRC39-203ENST00000370138 USMG5Q96IX5 58 aa2.13□□□□□ -2.07
LRRC39-203ENST00000370138 DSPP15924 2871 aaKnown RBP2.12□□□□□ -2.07
LRRC39-203ENST00000370138 ABCA2Q9BZC7 2435 aa2.12□□□□□ -2.07
LRRC39-203ENST00000370138 ANKHD1Q8IWZ3 2542 aaKnown RBP2.12□□□□□ -2.07
LRRC39-203ENST00000370138 CNOT1A5YKK6 2376 aaKnown RBP2.12□□□□□ -2.07
LRRC39-203ENST00000370138 PRUNE2Q8WUY3 3088 aa2.12□□□□□ -2.07
LRRC39-203ENST00000370138 H3BUX3 64 aa2.12□□□□□ -2.07
LRRC39-203ENST00000370138 INE1O15225 51 aa2.12□□□□□ -2.07
LRRC39-203ENST00000370138 FREM2Q5SZK8 3169 aa2.12□□□□□ -2.07
LRRC39-203ENST00000370138 WNK2Q9Y3S1 2297 aa2.12□□□□□ -2.07
LRRC39-203ENST00000370138 TPRP12270 2363 aaKnown RBP2.12□□□□□ -2.07
LRRC39-203ENST00000370138 K7EQZ3 153 aa2.11□□□□□ -2.07
LRRC39-203ENST00000370138 PP632Q6XCG6 107 aa2.11□□□□□ -2.07
LRRC39-203ENST00000370138 PRRC2CQ9Y520 2896 aaKnown RBP2.1□□□□□ -2.07
LRRC39-203ENST00000370138 IGLV5-48A0A075B6I7 105 aa2.1□□□□□ -2.07
LRRC39-203ENST00000370138 HTN1P15515 57 aa2.1□□□□□ -2.07
LRRC39-203ENST00000370138 Q6ZRX8 168 aa2.1□□□□□ -2.07
LRRC39-203ENST00000370138 CACNA1BQ00975 2339 aa2.1□□□□□ -2.07
LRRC39-203ENST00000370138 FRYQ5TBA9 3013 aa2.1□□□□□ -2.07
LRRC39-203ENST00000370138 MYO15AQ9UKN7 3530 aa2.1□□□□□ -2.07
LRRC39-203ENST00000370138 ACACAQ13085 2346 aa2.1□□□□□ -2.07
LRRC39-203ENST00000370138 ANKRD11Q6UB99 2663 aaPredicted RBP2.09□□□□□ -2.07
LRRC39-203ENST00000370138 CACNA1HO95180 2353 aa2.09□□□□□ -2.07
LRRC39-203ENST00000370138 COX6A2Q02221 97 aa2.09□□□□□ -2.07
LRRC39-203ENST00000370138 C10orf99Q6UWK7 81 aa2.09□□□□□ -2.07
LRRC39-203ENST00000370138 VPS13AQ96RL7 3174 aa2.09□□□□□ -2.07
LRRC39-203ENST00000370138 TNRC18O15417 2968 aaPredicted RBP2.09□□□□□ -2.07
LRRC39-203ENST00000370138 WDFY3Q8IZQ1 3526 aa2.09□□□□□ -2.08
LRRC39-203ENST00000370138 MAP1BP46821 2468 aaKnown RBP2.09□□□□□ -2.08
LRRC39-203ENST00000370138 SPTBN1Q01082 2364 aaKnown RBP2.09□□□□□ -2.08
LRRC39-203ENST00000370138 A8MTW9 85 aa2.08□□□□□ -2.08
LRRC39-203ENST00000370138 DEFB131AP59861 70 aa2.08□□□□□ -2.08
LRRC39-203ENST00000370138 PLAC4Q8WY50 150 aa2.08□□□□□ -2.08
LRRC39-203ENST00000370138 C6orf48Q9UBA6 75 aa2.08□□□□□ -2.08
LRRC39-203ENST00000370138 EP300Q09472 2414 aaPredicted RBP2.08□□□□□ -2.08
LRRC39-203ENST00000370138 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
LRRC39-203ENST00000370138 ZZEF1O43149 2961 aa2.08□□□□□ -2.08
LRRC39-203ENST00000370138 DOPEY2Q9Y3R5 2298 aa2.08□□□□□ -2.08
LRRC39-203ENST00000370138 IGKV2-24A0A0C4DH68 120 aa2.07□□□□□ -2.08
LRRC39-203ENST00000370138 HRNRQ86YZ3 2850 aaPredicted RBP2.07□□□□□ -2.08
LRRC39-203ENST00000370138 PIEZO2Q9H5I5 2752 aa2.07□□□□□ -2.08
LRRC39-203ENST00000370138 AKAP13Q12802 2813 aa2.07□□□□□ -2.08
LRRC39-203ENST00000370138 DEFB136Q30KP8 78 aa2.07□□□□□ -2.08
LRRC39-203ENST00000370138 PCOTHQ58A44 107 aa2.07□□□□□ -2.08
LRRC39-203ENST00000370138 WFDC13Q8IUB5 93 aa2.07□□□□□ -2.08
LRRC39-203ENST00000370138 TOMM7Q9P0U1 55 aa2.07□□□□□ -2.08
LRRC39-203ENST00000370138 BDP1A6H8Y1 2624 aa2.07□□□□□ -2.08
LRRC39-203ENST00000370138 GVINP1Q7Z2Y8 2422 aa2.06□□□□□ -2.08
LRRC39-203ENST00000370138 PTPRZ1P23471 2315 aaPredicted RBP2.06□□□□□ -2.08
LRRC39-203ENST00000370138 TLN1Q9Y490 2541 aaKnown RBP2.06□□□□□ -2.08
LRRC39-203ENST00000370138 CELSR3Q9NYQ7 3312 aa2.06□□□□□ -2.08
LRRC39-203ENST00000370138 GVQW2A0A096LPI5 108 aaPredicted RBP2.06□□□□□ -2.08
LRRC39-203ENST00000370138 COX6B2Q6YFQ2 88 aa2.06□□□□□ -2.08
LRRC39-203ENST00000370138 WFDC10BQ8IUB3 73 aa2.06□□□□□ -2.08
LRRC39-203ENST00000370138 SPENQ96T58 3664 aaKnown RBP2.06□□□□□ -2.08
LRRC39-203ENST00000370138 CRIPTQ9P021 101 aa2.06□□□□□ -2.08
LRRC39-203ENST00000370138 CFAP47Q6ZTR5 3102 aa2.05□□□□□ -2.08
LRRC39-203ENST00000370138 COL6A6A6NMZ7 2263 aa2.05□□□□□ -2.08
LRRC39-203ENST00000370138 BAHCC1Q9P281 2608 aa2.04□□□□□ -2.08
LRRC39-203ENST00000370138 DCHS2Q6V1P9 2916 aa2.03□□□□□ -2.08
LRRC39-203ENST00000370138 AKAP6Q13023 2319 aa2.03□□□□□ -2.08
LRRC39-203ENST00000370138 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.03□□□□□ -2.08
LRRC39-203ENST00000370138 SPTA1P02549 2419 aa2.03□□□□□ -2.08
LRRC39-203ENST00000370138 HIVEP3Q5T1R4 2406 aa2.03□□□□□ -2.08
LRRC39-203ENST00000370138 NOP10Q9NPE3 64 aaKnown RBP2.03□□□□□ -2.08
LRRC39-203ENST00000370138 DMDP11532 3685 aa2.03□□□□□ -2.08
LRRC39-203ENST00000370138 WDFY4Q6ZS81 3184 aa2.03□□□□□ -2.08
LRRC39-203ENST00000370138 TTC28Q96AY4 2481 aa2.03□□□□□ -2.09
LRRC39-203ENST00000370138 MGAQ8IWI9 3026 aa2.03□□□□□ -2.09
LRRC39-203ENST00000370138 DMXL2Q8TDJ6 3036 aa2.03□□□□□ -2.09
LRRC39-203ENST00000370138 ALMS1Q8TCU4 4167 aa2.02□□□□□ -2.09
LRRC39-203ENST00000370138 CLPSL2Q6UWE3 100 aa2.02□□□□□ -2.09
LRRC39-203ENST00000370138 MRPL34Q9BQ48 92 aaKnown RBP2.02□□□□□ -2.09
LRRC39-203ENST00000370138 SPTAN1Q13813 2472 aaKnown RBP2.02□□□□□ -2.09
LRRC39-203ENST00000370138 KALRNO60229 2985 aa2.02□□□□□ -2.09
LRRC39-203ENST00000370138 NBASA2RRP1 2371 aa2.02□□□□□ -2.09
LRRC39-203ENST00000370138 ZNF292O60281 2723 aa2.02□□□□□ -2.09
LRRC39-203ENST00000370138 SETXQ7Z333 2677 aaKnown RBP2.01□□□□□ -2.09
LRRC39-203ENST00000370138 Q6ZRN7 208 aaPredicted RBP2.01□□□□□ -2.09
LRRC39-203ENST00000370138 MUC6Q6W4X9 2439 aa2.01□□□□□ -2.09
LRRC39-203ENST00000370138 IGF2RP11717 2491 aa2.01□□□□□ -2.09
LRRC39-203ENST00000370138 LOC400499M0QZD8 3231 aa2.01□□□□□ -2.09
LRRC39-203ENST00000370138 SMG1Q96Q15 3661 aaKnown RBP2.01□□□□□ -2.09
LRRC39-203ENST00000370138 LRBAP50851 2863 aa2.01□□□□□ -2.09
LRRC39-203ENST00000370138 TACC2O95359 2948 aa2.01□□□□□ -2.09
LRRC39-203ENST00000370138 RIF1Q5UIP0 2472 aaKnown RBP2.01□□□□□ -2.09
LRRC39-203ENST00000370138 H0YAA0 97 aa2.01□□□□□ -2.09
LRRC39-203ENST00000370138 BOD1L1Q8NFC6 3051 aa2□□□□□ -2.09
LRRC39-203ENST00000370138 BSNQ9UPA5 3926 aa2□□□□□ -2.09
LRRC39-203ENST00000370138 DCHS1Q96JQ0 3298 aa2□□□□□ -2.09
LRRC39-203ENST00000370138 CEP295Q9C0D2 2601 aa2□□□□□ -2.09
LRRC39-203ENST00000370138 ZFHX4Q86UP3 3567 aa2□□□□□ -2.09
LRRC39-203ENST00000370138 CHD8Q9HCK8 2581 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms