RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 ITPR3Q14573 2671 aa10.76□□□□□ -0.69
SNX27-203ENST00000368843 LINC00472Q9H8W2 130 aa10.75□□□□□ -0.69
SNX27-203ENST00000368843 FLNBO75369 2602 aaKnown RBP10.75□□□□□ -0.69
SNX27-203ENST00000368843 CEP350Q5VT06 3117 aa10.74□□□□□ -0.69
SNX27-203ENST00000368843 H3BS24 57 aa10.72□□□□□ -0.69
SNX27-203ENST00000368843 LINC01558Q9Y6Z2 57 aa10.72□□□□□ -0.69
SNX27-203ENST00000368843 SPRR1BP22528 89 aa10.71□□□□□ -0.69
SNX27-203ENST00000368843 Q5XG85 94 aa10.69□□□□□ -0.7
SNX27-203ENST00000368843 M0QZ58 72 aa10.68□□□□□ -0.7
SNX27-203ENST00000368843 Q5VV11 94 aa10.66□□□□□ -0.7
SNX27-203ENST00000368843 KRTAP26-1Q6PEX3 210 aa10.65□□□□□ -0.7
SNX27-203ENST00000368843 SPATA8Q6RVD6 105 aa10.64□□□□□ -0.71
SNX27-203ENST00000368843 OXTP01178 125 aa10.63□□□□□ -0.71
SNX27-203ENST00000368843 FP248Q71RG6 208 aaPredicted RBP10.63□□□□□ -0.71
SNX27-203ENST00000368843 HELZ2Q9BYK8 2649 aaKnown RBP10.62□□□□□ -0.71
SNX27-203ENST00000368843 PLAC4Q8WY50 150 aa10.62□□□□□ -0.71
SNX27-203ENST00000368843 ADM2Q7Z4H4 148 aa10.59□□□□□ -0.71
SNX27-203ENST00000368843 ATRQ13535 2644 aa10.58□□□□□ -0.72
SNX27-203ENST00000368843 PANO1I0J062 215 aa10.57□□□□□ -0.72
SNX27-203ENST00000368843 CFAP46Q8IYW2 2715 aa10.54□□□□□ -0.72
SNX27-203ENST00000368843 RPL37P61927 97 aaKnown RBP10.54□□□□□ -0.72
SNX27-203ENST00000368843 MKI67P46013 3256 aaKnown RBP10.53□□□□□ -0.72
SNX27-203ENST00000368843 CHD7Q9P2D1 2997 aa10.53□□□□□ -0.72
SNX27-203ENST00000368843 H1FX-AS1Q4G0G2 97 aa10.53□□□□□ -0.72
SNX27-203ENST00000368843 MAST4O15021 2626 aa10.52□□□□□ -0.73
SNX27-203ENST00000368843 ROMO1P60602 79 aa10.52□□□□□ -0.73
SNX27-203ENST00000368843 Q6ZR54 194 aa10.52□□□□□ -0.73
SNX27-203ENST00000368843 A0A0A0MQY5 61 aa10.51□□□□□ -0.73
SNX27-203ENST00000368843 A0A087X002 238 aa10.5□□□□□ -0.73
SNX27-203ENST00000368843 XIRP2A4UGR9 3374 aa10.46□□□□□ -0.74
SNX27-203ENST00000368843 CFAP54Q96N23 3096 aa10.4□□□□□ -0.74
SNX27-203ENST00000368843 KRTAP4-16G5E9R7 235 aaPredicted RBP10.36□□□□□ -0.75
SNX27-203ENST00000368843 NOTCH2NLQ7Z3S9 236 aa10.33□□□□□ -0.76
SNX27-203ENST00000368843 FLG2Q5D862 2391 aaPredicted RBP10.31□□□□□ -0.76
SNX27-203ENST00000368843 A8MU10 97 aa10.3□□□□□ -0.76
SNX27-203ENST00000368843 TEX15Q9BXT5 2789 aa10.27□□□□□ -0.76
SNX27-203ENST00000368843 BRCA2P51587 3418 aa10.27□□□□□ -0.77
SNX27-203ENST00000368843 KRTAP11-1Q8IUC1 163 aa10.26□□□□□ -0.77
SNX27-203ENST00000368843 MGAQ8IWI9 3026 aa10.24□□□□□ -0.77
SNX27-203ENST00000368843 CELSR3Q9NYQ7 3312 aa10.24□□□□□ -0.77
SNX27-203ENST00000368843 CHD6Q8TD26 2715 aa10.23□□□□□ -0.77
SNX27-203ENST00000368843 AKAP13Q12802 2813 aa10.22□□□□□ -0.77
SNX27-203ENST00000368843 KRTAP29-1A8MX34 341 aaPredicted RBP10.22□□□□□ -0.77
SNX27-203ENST00000368843 C20orf166-AS1Q96NR2 134 aa10.22□□□□□ -0.77
SNX27-203ENST00000368843 A8MUU9 505 aa10.22□□□□□ -0.77
SNX27-203ENST00000368843 DNAH14Q0VDD8 3507 aa10.19□□□□□ -0.78
SNX27-203ENST00000368843 Q6ZRN7 208 aaPredicted RBP10.19□□□□□ -0.78
SNX27-203ENST00000368843 TRIOO75962 3097 aa10.18□□□□□ -0.78
SNX27-203ENST00000368843 RPS29P62273 56 aaKnown RBP10.18□□□□□ -0.78
SNX27-203ENST00000368843 STAB1Q9NY15 2570 aa10.18□□□□□ -0.78
SNX27-203ENST00000368843 CHD9Q3L8U1 2897 aa10.18□□□□□ -0.78
SNX27-203ENST00000368843 HTTP42858 3142 aa10.17□□□□□ -0.78
SNX27-203ENST00000368843 A0A0C4DFX4 3053 aa10.17□□□□□ -0.78
SNX27-203ENST00000368843 LAMA3Q16787 3333 aa10.16□□□□□ -0.78
SNX27-203ENST00000368843 NBEAL1Q6ZS30 2694 aa10.16□□□□□ -0.78
SNX27-203ENST00000368843 ASB16-AS1Q495Z4 193 aa10.13□□□□□ -0.79
SNX27-203ENST00000368843 CENPEQ02224 2701 aa10.12□□□□□ -0.79
SNX27-203ENST00000368843 LAMA2P24043 3122 aaKnown RBP10.11□□□□□ -0.79
SNX27-203ENST00000368843 KRTAP13-2Q52LG2 175 aa10.09□□□□□ -0.79
SNX27-203ENST00000368843 FREM2Q5SZK8 3169 aa10.09□□□□□ -0.79
SNX27-203ENST00000368843 TEP1Q99973 2627 aaKnown RBP10.09□□□□□ -0.79
SNX27-203ENST00000368843 CDH23Q9H251 3354 aa10.09□□□□□ -0.79
SNX27-203ENST00000368843 RANBP2P49792 3224 aaKnown RBP10.08□□□□□ -0.8
SNX27-203ENST00000368843 SZT2Q5T011 3432 aa10.05□□□□□ -0.8
SNX27-203ENST00000368843 KRTAP7-1Q8IUC3 87 aa10.04□□□□□ -0.8
SNX27-203ENST00000368843 UNC80Q8N2C7 3258 aa10.01□□□□□ -0.81
SNX27-203ENST00000368843 PRUNE2Q8WUY3 3088 aa10.01□□□□□ -0.81
SNX27-203ENST00000368843 DMBT1Q9UGM3 2413 aaPredicted RBP10.01□□□□□ -0.81
SNX27-203ENST00000368843 WDFY4Q6ZS81 3184 aa10□□□□□ -0.81
SNX27-203ENST00000368843 UNC79Q9P2D8 2635 aa9.99□□□□□ -0.81
SNX27-203ENST00000368843 TRANK1O15050 2925 aa9.99□□□□□ -0.81
SNX27-203ENST00000368843 GCN1Q92616 2671 aaKnown RBP9.98□□□□□ -0.81
SNX27-203ENST00000368843 KRTAP25-1Q3LHN0 102 aa9.97□□□□□ -0.81
SNX27-203ENST00000368843 BAHCC1Q9P281 2608 aa9.97□□□□□ -0.81
SNX27-203ENST00000368843 SETXQ7Z333 2677 aaKnown RBP9.96□□□□□ -0.81
SNX27-203ENST00000368843 KRTAP16-1A8MUX0 517 aa9.95□□□□□ -0.82
SNX27-203ENST00000368843 C10orf95Q9H7T3 257 aa9.93□□□□□ -0.82
SNX27-203ENST00000368843 KRTAP13-1Q8IUC0 172 aa9.92□□□□□ -0.82
SNX27-203ENST00000368843 NDUFAF8A1L188 74 aa9.91□□□□□ -0.82
SNX27-203ENST00000368843 COL6A5A8TX70 2615 aa9.91□□□□□ -0.82
SNX27-203ENST00000368843 A0A1B0GVY2 172 aa9.88□□□□□ -0.83
SNX27-203ENST00000368843 COL6A3P12111 3177 aa9.87□□□□□ -0.83
SNX27-203ENST00000368843 ITPR2Q14571 2701 aa9.86□□□□□ -0.83
SNX27-203ENST00000368843 KRTAP21-3Q3LHN1 58 aa9.86□□□□□ -0.83
SNX27-203ENST00000368843 TNP1P09430 55 aa9.85□□□□□ -0.83
SNX27-203ENST00000368843 ZNF292O60281 2723 aa9.84□□□□□ -0.83
SNX27-203ENST00000368843 NBEAL2Q6ZNJ1 2754 aa9.84□□□□□ -0.83
SNX27-203ENST00000368843 A6NN06 94 aa9.84□□□□□ -0.83
SNX27-203ENST00000368843 VPS13AQ96RL7 3174 aa9.83□□□□□ -0.84
SNX27-203ENST00000368843 FRYQ5TBA9 3013 aa9.83□□□□□ -0.84
SNX27-203ENST00000368843 KMT2BQ9UMN6 2715 aaPredicted RBP9.79□□□□□ -0.84
SNX27-203ENST00000368843 REV3LO60673 3130 aa9.78□□□□□ -0.84
SNX27-203ENST00000368843 DSPP15924 2871 aaKnown RBP9.77□□□□□ -0.84
SNX27-203ENST00000368843 IGSF10Q6WRI0 2623 aa9.76□□□□□ -0.85
SNX27-203ENST00000368843 NOTCH1P46531 2555 aa9.73□□□□□ -0.85
SNX27-203ENST00000368843 VCANP13611 3396 aa9.72□□□□□ -0.85
SNX27-203ENST00000368843 KRTAP10-8P60410 259 aa9.7□□□□□ -0.86
SNX27-203ENST00000368843 CFAP47Q6ZTR5 3102 aa9.65□□□□□ -0.86
SNX27-203ENST00000368843 XP32Q5T750 250 aa9.65□□□□□ -0.87
SNX27-203ENST00000368843 STAB2Q8WWQ8 2551 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms