RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 H3BS24 57 aa10.88□□□□□ -0.67
SNX27-202ENST00000368841 ADM2Q7Z4H4 148 aa10.86□□□□□ -0.67
SNX27-202ENST00000368841 FP248Q71RG6 208 aaPredicted RBP10.85□□□□□ -0.67
SNX27-202ENST00000368841 LINC00472Q9H8W2 130 aa10.85□□□□□ -0.67
SNX27-202ENST00000368841 PRRC2CQ9Y520 2896 aaKnown RBP10.84□□□□□ -0.67
SNX27-202ENST00000368841 SEC61BP60468 96 aaKnown RBP10.84□□□□□ -0.67
SNX27-202ENST00000368841 KRTAP26-1Q6PEX3 210 aa10.83□□□□□ -0.68
SNX27-202ENST00000368841 USP24Q9UPU5 2620 aa10.83□□□□□ -0.68
SNX27-202ENST00000368841 CELSR3Q9NYQ7 3312 aa10.82□□□□□ -0.68
SNX27-202ENST00000368841 SPRR1AP35321 89 aa10.81□□□□□ -0.68
SNX27-202ENST00000368841 PANO1I0J062 215 aa10.79□□□□□ -0.68
SNX27-202ENST00000368841 DNAH14Q0VDD8 3507 aa10.79□□□□□ -0.68
SNX27-202ENST00000368841 ROMO1P60602 79 aa10.76□□□□□ -0.69
SNX27-202ENST00000368841 H1FX-AS1Q4G0G2 97 aa10.76□□□□□ -0.69
SNX27-202ENST00000368841 HECTD1Q9ULT8 2610 aa10.75□□□□□ -0.69
SNX27-202ENST00000368841 CFAP54Q96N23 3096 aa10.74□□□□□ -0.69
SNX27-202ENST00000368841 PLAC4Q8WY50 150 aa10.74□□□□□ -0.69
SNX27-202ENST00000368841 SZT2Q5T011 3432 aa10.72□□□□□ -0.69
SNX27-202ENST00000368841 A0A0A0MQY5 61 aa10.72□□□□□ -0.69
SNX27-202ENST00000368841 RPL37P61927 97 aaKnown RBP10.72□□□□□ -0.69
SNX27-202ENST00000368841 LCE6AA0A183 80 aa10.7□□□□□ -0.7
SNX27-202ENST00000368841 Q6ZR54 194 aa10.69□□□□□ -0.7
SNX27-202ENST00000368841 BRCA2P51587 3418 aa10.68□□□□□ -0.7
SNX27-202ENST00000368841 MGAM2Q2M2H8 2515 aa10.67□□□□□ -0.7
SNX27-202ENST00000368841 A0A087X002 238 aa10.67□□□□□ -0.7
SNX27-202ENST00000368841 CDH23Q9H251 3354 aa10.64□□□□□ -0.71
SNX27-202ENST00000368841 OXTP01178 125 aa10.64□□□□□ -0.71
SNX27-202ENST00000368841 SPRR1BP22528 89 aa10.63□□□□□ -0.71
SNX27-202ENST00000368841 FREM2Q5SZK8 3169 aa10.62□□□□□ -0.71
SNX27-202ENST00000368841 CHD7Q9P2D1 2997 aa10.62□□□□□ -0.71
SNX27-202ENST00000368841 NOTCH2NLQ7Z3S9 236 aa10.61□□□□□ -0.71
SNX27-202ENST00000368841 FLNAP21333 2647 aaKnown RBP10.57□□□□□ -0.72
SNX27-202ENST00000368841 ITPR3Q14573 2671 aa10.54□□□□□ -0.72
SNX27-202ENST00000368841 LAMA3Q16787 3333 aa10.54□□□□□ -0.72
SNX27-202ENST00000368841 A8MU10 97 aa10.53□□□□□ -0.72
SNX27-202ENST00000368841 REV3LO60673 3130 aa10.51□□□□□ -0.73
SNX27-202ENST00000368841 TRIOO75962 3097 aa10.51□□□□□ -0.73
SNX27-202ENST00000368841 KRTAP11-1Q8IUC1 163 aa10.5□□□□□ -0.73
SNX27-202ENST00000368841 A0A0C4DFX4 3053 aa10.48□□□□□ -0.73
SNX27-202ENST00000368841 RANBP2P49792 3224 aaKnown RBP10.48□□□□□ -0.73
SNX27-202ENST00000368841 LAMA2P24043 3122 aaKnown RBP10.48□□□□□ -0.73
SNX27-202ENST00000368841 EPG5Q9HCE0 2579 aa10.46□□□□□ -0.73
SNX27-202ENST00000368841 C20orf166-AS1Q96NR2 134 aa10.45□□□□□ -0.74
SNX27-202ENST00000368841 A8MUU9 505 aa10.39□□□□□ -0.75
SNX27-202ENST00000368841 KRTAP4-16G5E9R7 235 aaPredicted RBP10.39□□□□□ -0.75
SNX27-202ENST00000368841 ATRQ13535 2644 aa10.37□□□□□ -0.75
SNX27-202ENST00000368841 PRUNE2Q8WUY3 3088 aa10.36□□□□□ -0.75
SNX27-202ENST00000368841 FLNBO75369 2602 aaKnown RBP10.36□□□□□ -0.75
SNX27-202ENST00000368841 UNC80Q8N2C7 3258 aa10.35□□□□□ -0.75
SNX27-202ENST00000368841 KRTAP29-1A8MX34 341 aaPredicted RBP10.33□□□□□ -0.76
SNX27-202ENST00000368841 HTTP42858 3142 aa10.33□□□□□ -0.76
SNX27-202ENST00000368841 MGAQ8IWI9 3026 aa10.32□□□□□ -0.76
SNX27-202ENST00000368841 COL6A3P12111 3177 aa10.29□□□□□ -0.76
SNX27-202ENST00000368841 CFAP46Q8IYW2 2715 aa10.26□□□□□ -0.77
SNX27-202ENST00000368841 MAST4O15021 2626 aa10.26□□□□□ -0.77
SNX27-202ENST00000368841 VPS13AQ96RL7 3174 aa10.25□□□□□ -0.77
SNX27-202ENST00000368841 WDFY4Q6ZS81 3184 aa10.21□□□□□ -0.77
SNX27-202ENST00000368841 HELZ2Q9BYK8 2649 aaKnown RBP10.21□□□□□ -0.77
SNX27-202ENST00000368841 KRTAP7-1Q8IUC3 87 aa10.2□□□□□ -0.78
SNX27-202ENST00000368841 KRTAP13-2Q52LG2 175 aa10.2□□□□□ -0.78
SNX27-202ENST00000368841 KRTAP25-1Q3LHN0 102 aa10.19□□□□□ -0.78
SNX27-202ENST00000368841 CHD6Q8TD26 2715 aa10.18□□□□□ -0.78
SNX27-202ENST00000368841 FLG2Q5D862 2391 aaPredicted RBP10.18□□□□□ -0.78
SNX27-202ENST00000368841 USP34Q70CQ2 3546 aa10.16□□□□□ -0.78
SNX27-202ENST00000368841 A0A1B0GVY2 172 aa10.15□□□□□ -0.78
SNX27-202ENST00000368841 C10orf95Q9H7T3 257 aa10.15□□□□□ -0.78
SNX27-202ENST00000368841 CHD9Q3L8U1 2897 aa10.15□□□□□ -0.79
SNX27-202ENST00000368841 AKAP13Q12802 2813 aa10.14□□□□□ -0.79
SNX27-202ENST00000368841 Q6ZRN7 208 aaPredicted RBP10.14□□□□□ -0.79
SNX27-202ENST00000368841 KRTAP16-1A8MUX0 517 aa10.12□□□□□ -0.79
SNX27-202ENST00000368841 SPEGQ15772 3267 aa10.12□□□□□ -0.79
SNX27-202ENST00000368841 TEX15Q9BXT5 2789 aa10.11□□□□□ -0.79
SNX27-202ENST00000368841 CFAP47Q6ZTR5 3102 aa10.11□□□□□ -0.79
SNX27-202ENST00000368841 NDUFAF8A1L188 74 aa10.1□□□□□ -0.79
SNX27-202ENST00000368841 MYO15AQ9UKN7 3530 aa10.06□□□□□ -0.8
SNX27-202ENST00000368841 VCANP13611 3396 aa10.05□□□□□ -0.8
SNX27-202ENST00000368841 NBEAL1Q6ZS30 2694 aa10.04□□□□□ -0.8
SNX27-202ENST00000368841 A6NN06 94 aa10.04□□□□□ -0.8
SNX27-202ENST00000368841 FRYQ5TBA9 3013 aa10□□□□□ -0.81
SNX27-202ENST00000368841 ASB16-AS1Q495Z4 193 aa9.98□□□□□ -0.81
SNX27-202ENST00000368841 DMBT1Q9UGM3 2413 aaPredicted RBP9.97□□□□□ -0.81
SNX27-202ENST00000368841 TNP1P09430 55 aa9.97□□□□□ -0.81
SNX27-202ENST00000368841 RPS29P62273 56 aaKnown RBP9.95□□□□□ -0.82
SNX27-202ENST00000368841 GCN1Q92616 2671 aaKnown RBP9.95□□□□□ -0.82
SNX27-202ENST00000368841 SPTBN5Q9NRC6 3674 aaKnown RBP9.94□□□□□ -0.82
SNX27-202ENST00000368841 CENPEQ02224 2701 aa9.94□□□□□ -0.82
SNX27-202ENST00000368841 KRTAP10-8P60410 259 aa9.92□□□□□ -0.82
SNX27-202ENST00000368841 NBEAL2Q6ZNJ1 2754 aa9.92□□□□□ -0.82
SNX27-202ENST00000368841 KRTAP13-1Q8IUC0 172 aa9.9□□□□□ -0.82
SNX27-202ENST00000368841 TEP1Q99973 2627 aaKnown RBP9.89□□□□□ -0.83
SNX27-202ENST00000368841 KALRNO60229 2985 aa9.86□□□□□ -0.83
SNX27-202ENST00000368841 ASPMQ8IZT6 3477 aa9.85□□□□□ -0.83
SNX27-202ENST00000368841 STAB1Q9NY15 2570 aa9.84□□□□□ -0.83
SNX27-202ENST00000368841 LAMA1P25391 3075 aa9.84□□□□□ -0.83
SNX27-202ENST00000368841 WDFY3Q8IZQ1 3526 aa9.84□□□□□ -0.83
SNX27-202ENST00000368841 CRYBG3Q68DQ2 2970 aa9.82□□□□□ -0.84
SNX27-202ENST00000368841 TRANK1O15050 2925 aa9.81□□□□□ -0.84
SNX27-202ENST00000368841 UNC79Q9P2D8 2635 aa9.78□□□□□ -0.84
SNX27-202ENST00000368841 DCHS1Q96JQ0 3298 aa9.77□□□□□ -0.85
SNX27-202ENST00000368841 LRBAP50851 2863 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 171.1 ms