RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.15□□□□□ -1.1
TPM3-211ENST00000368531 Q8N377 158 aa8.15□□□□□ -1.1
TPM3-211ENST00000368531 LAMTOR3Q9UHA4 124 aa8.15□□□□□ -1.1
TPM3-211ENST00000368531 FAT3Q8TDW7 4589 aa8.15□□□□□ -1.1
TPM3-211ENST00000368531 MYCBP2O75592 4640 aa8.14□□□□□ -1.11
TPM3-211ENST00000368531 SNHG12Q9BXW3 62 aa8.14□□□□□ -1.11
TPM3-211ENST00000368531 PCLOQ9Y6V0 5065 aa8.13□□□□□ -1.11
TPM3-211ENST00000368531 Q8NBF4 154 aa8.12□□□□□ -1.11
TPM3-211ENST00000368531 A0A1B0GX51 115 aa8.11□□□□□ -1.11
TPM3-211ENST00000368531 H3BUT2 72 aa8.11□□□□□ -1.11
TPM3-211ENST00000368531 SMIM29Q86T20 159 aa8.11□□□□□ -1.11
TPM3-211ENST00000368531 LINC00304Q8N9R0 145 aa8.11□□□□□ -1.11
TPM3-211ENST00000368531 DNAL4O96015 105 aa8.1□□□□□ -1.11
TPM3-211ENST00000368531 TAX1BP3O14907 124 aa8.09□□□□□ -1.11
TPM3-211ENST00000368531 XP32Q5T750 250 aa8.09□□□□□ -1.11
TPM3-211ENST00000368531 SSBP3-AS1Q7Z2R9 100 aa8.09□□□□□ -1.11
TPM3-211ENST00000368531 C9orf118A6NHY6 69 aa8.08□□□□□ -1.12
TPM3-211ENST00000368531 F8WEM9 126 aa8.07□□□□□ -1.12
TPM3-211ENST00000368531 FABP2P12104 132 aa8.07□□□□□ -1.12
TPM3-211ENST00000368531 OCIAD2Q56VL3 154 aa8.07□□□□□ -1.12
TPM3-211ENST00000368531 A0A0G2JQZ4 141 aa8.06□□□□□ -1.12
TPM3-211ENST00000368531 LST1O00453 97 aa8.06□□□□□ -1.12
TPM3-211ENST00000368531 TCL1BO95988 128 aa8.06□□□□□ -1.12
TPM3-211ENST00000368531 ORMDL1Q9P0S3 153 aa8.06□□□□□ -1.12
TPM3-211ENST00000368531 DMBT1Q9UGM3 2413 aaPredicted RBP8.05□□□□□ -1.12
TPM3-211ENST00000368531 TRACP01848 142 aa8.05□□□□□ -1.12
TPM3-211ENST00000368531 COL5A1-AS1Q5SY13 56 aa8.05□□□□□ -1.12
TPM3-211ENST00000368531 HRCT1Q6UXD1 115 aa8.05□□□□□ -1.12
TPM3-211ENST00000368531 PPDPFLQ8WWR9 84 aa8.05□□□□□ -1.12
TPM3-211ENST00000368531 ATXN8Q156A1 80 aa8.04□□□□□ -1.12
TPM3-211ENST00000368531 LYRM7Q5U5X0 104 aa8.04□□□□□ -1.12
TPM3-211ENST00000368531 GHRHP01286 108 aa8.03□□□□□ -1.12
TPM3-211ENST00000368531 NDUFV3P56181 108 aaKnown RBP8.03□□□□□ -1.12
TPM3-211ENST00000368531 SPAG11AQ6PDA7 123 aa8.03□□□□□ -1.12
TPM3-211ENST00000368531 TNXBP22105 4242 aa8.02□□□□□ -1.12
TPM3-211ENST00000368531 A0A1W2PPM0 123 aa8.02□□□□□ -1.13
TPM3-211ENST00000368531 A0A1B0GV72 72 aa8.01□□□□□ -1.13
TPM3-211ENST00000368531 BAALC-AS2P0C853 105 aa8□□□□□ -1.13
TPM3-211ENST00000368531 TRBV20-1A0A075B6N2 111 aa7.99□□□□□ -1.13
TPM3-211ENST00000368531 TMEM256-PLSCR3K7ERE1 68 aa7.99□□□□□ -1.13
TPM3-211ENST00000368531 SPINK1P00995 79 aa7.99□□□□□ -1.13
TPM3-211ENST00000368531 H3BMG7 143 aa7.98□□□□□ -1.13
TPM3-211ENST00000368531 H3BQ85 93 aa7.98□□□□□ -1.13
TPM3-211ENST00000368531 RETNLBQ9BQ08 111 aa7.98□□□□□ -1.13
TPM3-211ENST00000368531 IGLV8-61A0A075B6I0 122 aa7.97□□□□□ -1.13
TPM3-211ENST00000368531 Q6JHZ5 121 aa7.97□□□□□ -1.13
TPM3-211ENST00000368531 IGFL1Q6UW32 110 aa7.97□□□□□ -1.13
TPM3-211ENST00000368531 C9JAW5 83 aa7.96□□□□□ -1.14
TPM3-211ENST00000368531 SPCS1Q9Y6A9 102 aa7.96□□□□□ -1.14
TPM3-211ENST00000368531 UBE2V1Q13404 147 aa7.95□□□□□ -1.14
TPM3-211ENST00000368531 PRR4Q16378 134 aa7.95□□□□□ -1.14
TPM3-211ENST00000368531 MTURNQ8N3F0 131 aa7.94□□□□□ -1.14
TPM3-211ENST00000368531 ANKRD29Q8N6D5 301 aa7.94□□□□□ -1.14
TPM3-211ENST00000368531 CD164Q04900 197 aa7.93□□□□□ -1.14
TPM3-211ENST00000368531 RPS29P62273 56 aaKnown RBP7.91□□□□□ -1.14
TPM3-211ENST00000368531 LIMD2Q9BT23 127 aa7.9□□□□□ -1.14
TPM3-211ENST00000368531 TRBV7-7A0A0K0K1E9 115 aa7.88□□□□□ -1.15
TPM3-211ENST00000368531 RBM3P98179 157 aaKnown RBP7.88□□□□□ -1.15
TPM3-211ENST00000368531 K7EP34 96 aa7.87□□□□□ -1.15
TPM3-211ENST00000368531 A0A1W2PNM2 257 aa7.86□□□□□ -1.15
TPM3-211ENST00000368531 TEN1Q86WV5 123 aa7.86□□□□□ -1.15
TPM3-211ENST00000368531 DSCR8Q96T75 97 aa7.86□□□□□ -1.15
TPM3-211ENST00000368531 IGLV7-46A0A075B6I9 117 aa7.85□□□□□ -1.15
TPM3-211ENST00000368531 H3BT86 120 aa7.85□□□□□ -1.15
TPM3-211ENST00000368531 VPS25Q9BRG1 176 aa7.85□□□□□ -1.15
TPM3-211ENST00000368531 TRBV7-4A0A0J9YYF1 115 aa7.83□□□□□ -1.16
TPM3-211ENST00000368531 JMJD7-PLA2G4BH0Y9G9 81 aa7.83□□□□□ -1.16
TPM3-211ENST00000368531 CCKP06307 115 aa7.83□□□□□ -1.16
TPM3-211ENST00000368531 Q6Q795 121 aa7.83□□□□□ -1.16
TPM3-211ENST00000368531 GTF2H5Q6ZYL4 71 aa7.83□□□□□ -1.16
TPM3-211ENST00000368531 A0A087WSZ3 146 aa7.82□□□□□ -1.16
TPM3-211ENST00000368531 Q5XG85 94 aa7.82□□□□□ -1.16
TPM3-211ENST00000368531 KRTAP4-8Q9BYQ9 185 aa7.82□□□□□ -1.16
TPM3-211ENST00000368531 C14orf132Q9NPU4 83 aa7.82□□□□□ -1.16
TPM3-211ENST00000368531 HERC1Q15751 4861 aa7.82□□□□□ -1.16
TPM3-211ENST00000368531 FP248Q71RG6 208 aaPredicted RBP7.81□□□□□ -1.16
TPM3-211ENST00000368531 C1orf195Q5TG92 126 aa7.8□□□□□ -1.16
TPM3-211ENST00000368531 PRO0461Q9UI25 63 aa7.79□□□□□ -1.16
TPM3-211ENST00000368531 OBSCN-AS1Q96MR7 158 aa7.78□□□□□ -1.16
TPM3-211ENST00000368531 Q6ZQT0 140 aa7.77□□□□□ -1.17
TPM3-211ENST00000368531 SS18L2Q9UHA2 77 aa7.77□□□□□ -1.17
TPM3-211ENST00000368531 LOC110117498A0A087WWA1 95 aa7.76□□□□□ -1.17
TPM3-211ENST00000368531 ASB16-AS1Q495Z4 193 aa7.76□□□□□ -1.17
TPM3-211ENST00000368531 A0A1B0GV90 55 aa7.74□□□□□ -1.17
TPM3-211ENST00000368531 PDE6GP18545 87 aa7.74□□□□□ -1.17
TPM3-211ENST00000368531 F8W1H4 67 aa7.72□□□□□ -1.17
TPM3-211ENST00000368531 TPRXLQ17RH7 258 aa7.72□□□□□ -1.17
TPM3-211ENST00000368531 CDIP1Q9H305 208 aa7.72□□□□□ -1.17
TPM3-211ENST00000368531 KRTAP13-3Q3SY46 172 aa7.71□□□□□ -1.18
TPM3-211ENST00000368531 C9orf92A6NGG3 77 aa7.7□□□□□ -1.18
TPM3-211ENST00000368531 DEFB116Q30KQ4 102 aa7.7□□□□□ -1.18
TPM3-211ENST00000368531 Q96NJ1 140 aa7.7□□□□□ -1.18
TPM3-211ENST00000368531 IGKV4-1P06312 121 aa7.67□□□□□ -1.18
TPM3-211ENST00000368531 ETDBQ3ZM63 59 aa7.67□□□□□ -1.18
TPM3-211ENST00000368531 SIGMAR1Q99720 223 aa7.67□□□□□ -1.18
TPM3-211ENST00000368531 KRTAP9-2Q9BYQ4 174 aa7.66□□□□□ -1.18
TPM3-211ENST00000368531 LPAP08519 4548 aa7.66□□□□□ -1.18
TPM3-211ENST00000368531 C21orf62-AS1Q17RA5 79 aa7.65□□□□□ -1.18
TPM3-211ENST00000368531 LINC00472Q9H8W2 130 aa7.65□□□□□ -1.18
TPM3-211ENST00000368531 A0A1B0GW54 56 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms