RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 FP248Q71RG6 208 aaPredicted RBP7.73□□□□□ -1.17
TPR-201ENST00000367478 PRAC1Q96KF2 57 aa7.73□□□□□ -1.17
TPR-201ENST00000367478 UNC79Q9P2D8 2635 aa7.72□□□□□ -1.17
TPR-201ENST00000367478 Q5W150 140 aa7.7□□□□□ -1.18
TPR-201ENST00000367478 SEC61BP60468 96 aaKnown RBP7.7□□□□□ -1.18
TPR-201ENST00000367478 CASC10Q5T4H9 136 aa7.69□□□□□ -1.18
TPR-201ENST00000367478 TEX15Q9BXT5 2789 aa7.69□□□□□ -1.18
TPR-201ENST00000367478 KRTAP16-1A8MUX0 517 aa7.68□□□□□ -1.18
TPR-201ENST00000367478 H1FX-AS1Q4G0G2 97 aa7.67□□□□□ -1.18
TPR-201ENST00000367478 PLAC8Q9NZF1 115 aa7.66□□□□□ -1.18
TPR-201ENST00000367478 LINC00472Q9H8W2 130 aa7.66□□□□□ -1.18
TPR-201ENST00000367478 SPRR1AP35321 89 aa7.65□□□□□ -1.19
TPR-201ENST00000367478 A0A096LNT2 108 aa7.64□□□□□ -1.19
TPR-201ENST00000367478 COL6A5A8TX70 2615 aa7.64□□□□□ -1.19
TPR-201ENST00000367478 PLAC4Q8WY50 150 aa7.63□□□□□ -1.19
TPR-201ENST00000367478 SPRR1BP22528 89 aa7.63□□□□□ -1.19
TPR-201ENST00000367478 EP400Q96L91 3159 aa7.61□□□□□ -1.19
TPR-201ENST00000367478 KMT2BQ9UMN6 2715 aaPredicted RBP7.61□□□□□ -1.19
TPR-201ENST00000367478 KRTAP10-3P60369 221 aa7.61□□□□□ -1.19
TPR-201ENST00000367478 GCN1Q92616 2671 aaKnown RBP7.6□□□□□ -1.19
TPR-201ENST00000367478 M0QZ58 72 aa7.58□□□□□ -1.2
TPR-201ENST00000367478 CEP350Q5VT06 3117 aa7.57□□□□□ -1.2
TPR-201ENST00000367478 Q6ZR54 194 aa7.55□□□□□ -1.2
TPR-201ENST00000367478 BAHCC1Q9P281 2608 aa7.51□□□□□ -1.21
TPR-201ENST00000367478 TEP1Q99973 2627 aaKnown RBP7.51□□□□□ -1.21
TPR-201ENST00000367478 CYSTM1Q9H1C7 97 aa7.5□□□□□ -1.21
TPR-201ENST00000367478 SPATA8Q6RVD6 105 aa7.46□□□□□ -1.21
TPR-201ENST00000367478 KRTAP26-1Q6PEX3 210 aa7.45□□□□□ -1.22
TPR-201ENST00000367478 PANO1I0J062 215 aa7.45□□□□□ -1.22
TPR-201ENST00000367478 ADM2Q7Z4H4 148 aa7.45□□□□□ -1.22
TPR-201ENST00000367478 KRTAP25-1Q3LHN0 102 aa7.4□□□□□ -1.22
TPR-201ENST00000367478 OXTP01178 125 aa7.38□□□□□ -1.23
TPR-201ENST00000367478 Q8NDZ9 215 aa7.38□□□□□ -1.23
TPR-201ENST00000367478 SETXQ7Z333 2677 aaKnown RBP7.38□□□□□ -1.23
TPR-201ENST00000367478 KRTAP1-3Q8IUG1 177 aa7.38□□□□□ -1.23
TPR-201ENST00000367478 C20orf166-AS1Q96NR2 134 aa7.36□□□□□ -1.23
TPR-201ENST00000367478 DNAH12Q6ZR08 3092 aa7.36□□□□□ -1.23
TPR-201ENST00000367478 ITPR2Q14571 2701 aa7.36□□□□□ -1.23
TPR-201ENST00000367478 C5orf42Q9H799 3197 aa7.34□□□□□ -1.23
TPR-201ENST00000367478 KRTAP1-1Q07627 177 aa7.34□□□□□ -1.24
TPR-201ENST00000367478 APCP25054 2843 aa7.33□□□□□ -1.24
TPR-201ENST00000367478 Q5VSD8 79 aa7.33□□□□□ -1.24
TPR-201ENST00000367478 ZNF292O60281 2723 aa7.33□□□□□ -1.24
TPR-201ENST00000367478 A0A087X002 238 aa7.32□□□□□ -1.24
TPR-201ENST00000367478 KRTAP29-1A8MX34 341 aaPredicted RBP7.31□□□□□ -1.24
TPR-201ENST00000367478 RPS29P62273 56 aaKnown RBP7.3□□□□□ -1.24
TPR-201ENST00000367478 CFAP54Q96N23 3096 aa7.3□□□□□ -1.24
TPR-201ENST00000367478 PCNTO95613 3336 aa7.3□□□□□ -1.24
TPR-201ENST00000367478 IGSF10Q6WRI0 2623 aa7.3□□□□□ -1.24
TPR-201ENST00000367478 A6NN06 94 aa7.29□□□□□ -1.24
TPR-201ENST00000367478 NSD1Q96L73 2696 aaPredicted RBP7.28□□□□□ -1.24
TPR-201ENST00000367478 NDUFAF8A1L188 74 aa7.25□□□□□ -1.25
TPR-201ENST00000367478 A8MUU9 505 aa7.24□□□□□ -1.25
TPR-201ENST00000367478 NBEAL2Q6ZNJ1 2754 aa7.24□□□□□ -1.25
TPR-201ENST00000367478 KRTAP4-16G5E9R7 235 aaPredicted RBP7.24□□□□□ -1.25
TPR-201ENST00000367478 MAP1AP78559 2803 aaPredicted RBP7.24□□□□□ -1.25
TPR-201ENST00000367478 A0A0C4DFX4 3053 aa7.23□□□□□ -1.25
TPR-201ENST00000367478 UTP20O75691 2785 aaKnown RBP7.2□□□□□ -1.26
TPR-201ENST00000367478 TNP1P09430 55 aa7.2□□□□□ -1.26
TPR-201ENST00000367478 GOLGB1Q14789 3259 aaKnown RBP7.17□□□□□ -1.26
TPR-201ENST00000367478 KRTAP10-1P60331 282 aa7.16□□□□□ -1.26
TPR-201ENST00000367478 PP632Q6XCG6 107 aa7.16□□□□□ -1.26
TPR-201ENST00000367478 KRTAP1-5Q9BYS1 174 aa7.15□□□□□ -1.26
TPR-201ENST00000367478 LCE6AA0A183 80 aa7.15□□□□□ -1.26
TPR-201ENST00000367478 ITPR1Q14643 2758 aa7.13□□□□□ -1.27
TPR-201ENST00000367478 UBR5O95071 2799 aaPredicted RBP7.11□□□□□ -1.27
TPR-201ENST00000367478 NOTCH2NLQ7Z3S9 236 aa7.09□□□□□ -1.27
TPR-201ENST00000367478 KRTAP10-2P60368 255 aa7.08□□□□□ -1.28
TPR-201ENST00000367478 A8MU10 97 aa7.08□□□□□ -1.28
TPR-201ENST00000367478 C10orf95Q9H7T3 257 aa7.08□□□□□ -1.28
TPR-201ENST00000367478 LAMA2P24043 3122 aaKnown RBP7.06□□□□□ -1.28
TPR-201ENST00000367478 KRTAP11-1Q8IUC1 163 aa7.04□□□□□ -1.28
TPR-201ENST00000367478 MGAQ8IWI9 3026 aa7.02□□□□□ -1.29
TPR-201ENST00000367478 TRANK1O15050 2925 aa6.98□□□□□ -1.29
TPR-201ENST00000367478 UTRNP46939 3433 aa6.98□□□□□ -1.29
TPR-201ENST00000367478 FRYQ5TBA9 3013 aa6.93□□□□□ -1.3
TPR-201ENST00000367478 Q6ZRN7 208 aaPredicted RBP6.93□□□□□ -1.3
TPR-201ENST00000367478 DSPP15924 2871 aaKnown RBP6.9□□□□□ -1.3
TPR-201ENST00000367478 LRBAP50851 2863 aa6.88□□□□□ -1.31
TPR-201ENST00000367478 FRYLO94915 3013 aa6.88□□□□□ -1.31
TPR-201ENST00000367478 KALRNO60229 2985 aa6.83□□□□□ -1.32
TPR-201ENST00000367478 KRTAP13-1Q8IUC0 172 aa6.83□□□□□ -1.32
TPR-201ENST00000367478 ASH1LQ9NR48 2969 aaKnown RBP6.83□□□□□ -1.32
TPR-201ENST00000367478 TRIOO75962 3097 aa6.82□□□□□ -1.32
TPR-201ENST00000367478 P0C880 135 aa6.81□□□□□ -1.32
TPR-201ENST00000367478 VPS13AQ96RL7 3174 aa6.81□□□□□ -1.32
TPR-201ENST00000367478 CHD7Q9P2D1 2997 aa6.8□□□□□ -1.32
TPR-201ENST00000367478 KRTAP13-2Q52LG2 175 aa6.8□□□□□ -1.32
TPR-201ENST00000367478 FREM2Q5SZK8 3169 aa6.78□□□□□ -1.32
TPR-201ENST00000367478 TENM3Q9P273 2699 aa6.78□□□□□ -1.32
TPR-201ENST00000367478 PRO2289Q9P1D8 64 aa6.77□□□□□ -1.33
TPR-201ENST00000367478 KRTAP10-8P60410 259 aa6.77□□□□□ -1.33
TPR-201ENST00000367478 WDFY4Q6ZS81 3184 aa6.76□□□□□ -1.33
TPR-201ENST00000367478 TENM1Q9UKZ4 2725 aa6.75□□□□□ -1.33
TPR-201ENST00000367478 HIVEP1P15822 2718 aa6.73□□□□□ -1.33
TPR-201ENST00000367478 FLNCQ14315 2725 aa6.73□□□□□ -1.33
TPR-201ENST00000367478 PRUNE2Q8WUY3 3088 aa6.7□□□□□ -1.34
TPR-201ENST00000367478 DMXL2Q8TDJ6 3036 aa6.7□□□□□ -1.34
TPR-201ENST00000367478 NF1P21359 2839 aa6.7□□□□□ -1.34
TPR-201ENST00000367478 CHD9Q3L8U1 2897 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms